LOCUS       NM_001081201            6754 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus dpy-19 like 4 (Dpy19l4), mRNA.
ACCESSION   NM_001081201 XM_355469
VERSION     NM_001081201.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6754)
  AUTHORS   Shcherbakova,A., Tiemann,B., Buettner,F.F. and Bakker,H.
  TITLE     Distinct C-mannosylation of netrin receptor thrombospondin type 1
            repeats by mammalian DPY19L1 and DPY19L3
  JOURNAL   Proc Natl Acad Sci U S A 114 (10), 2574-2579 (2017)
   PUBMED   28202721
REFERENCE   2  (bases 1 to 6754)
  AUTHORS   Watanabe,K., Takebayashi,H., Bepari,A.K., Esumi,S., Yanagawa,Y. and
            Tamamaki,N.
  TITLE     Dpy19l1, a multi-transmembrane protein, regulates the radial
            migration of glutamatergic neurons in the developing cerebral
            cortex
  JOURNAL   Development 138 (22), 4979-4990 (2011)
   PUBMED   22028030
  REMARK    Erratum:[Development. 2012 Mar;139(6):1225]
REFERENCE   3  (bases 1 to 6754)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   4  (bases 1 to 6754)
  AUTHORS   Sugiura,N., Patel,R.G. and Corriveau,R.A.
  TITLE     N-methyl-D-aspartate receptors regulate a group of transiently
            expressed genes in the developing brain
  JOURNAL   J Biol Chem 276 (17), 14257-14263 (2001)
   PUBMED   11297529
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL772170.14, AL953845.10 and AL840625.9.
            
            On Dec 12, 2019 this sequence version replaced NM_001081201.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR10223971.4505.1,
                                           SRR9219381.124899.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-138               AL772170.14        28845-28982         c
            139-246             AL772170.14        23918-24025         c
            247-371             AL772170.14        16211-16335         c
            372-462             AL772170.14        11145-11235         c
            463-584             AL772170.14        10792-10913         c
            585-730             AL772170.14        10157-10302         c
            731-854             AL772170.14        2781-2904           c
            855-989             AL953845.10        18559-18693         c
            990-1121            AL953845.10        16396-16527         c
            1122-1220           AL953845.10        16196-16294         c
            1221-1294           AL953845.10        15675-15748         c
            1295-1453           AL953845.10        13480-13638         c
            1454-1573           AL953845.10        11059-11178         c
            1574-1694           AL953845.10        7009-7129           c
            1695-1751           AL953845.10        3934-3990           c
            1752-1834           AL953845.10        2869-2951           c
            1835-1967           AL840625.9         161289-161421       c
            1968-2126           AL840625.9         155895-156053       c
            2127-6754           AL840625.9         149597-154224       c
FEATURES             Location/Qualifiers
     source          1..6754
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 5.11 cM"
     gene            1..6754
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /note="dpy-19 like 4"
                     /db_xref="GeneID:381510"
                     /db_xref="MGI:MGI:2685869"
     exon            1..138
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     CDS             123..2291
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /note="protein dpy-19 homolog 4; dpy-19-like protein 4;
                     NMDA receptor-regulated gene 3"
                     /codon_start=1
                     /product="probable C-mannosyltransferase DPY19L4"
                     /protein_id="NP_001074670.1"
                     /db_xref="CCDS:CCDS38692.1"
                     /db_xref="GeneID:381510"
                     /db_xref="MGI:MGI:2685869"
                     /translation="MAKEEGTSVEPRQRKKQRTSGSQEAKAEKIRRTPAPERAPKYVS
                     FQRFAKIVIGCLAAVISGMMHVFYLSAYHERKFWFSNRQELEREITFQGDSAIYYSYY
                     KDMLKAPSFERGVYELTHNNKTISLKTINAMQQMSLYPELIASVLYQATGSNEVIEPV
                     YFYIGIVFGLQGMYVTALFVTSWLMSGTWLAGMLTVAWFLINRVDTTRIEYSIPLREN
                     WALPYFACQVAALTGYLKRNLNTYAERFCYLLLSTSTYTFMMVWEYSHYVLFLQAVSL
                     LLLDIFSVEQSDKVYEVYKVYIFSLFLGYLLQFENPALLVSPLLSLVGAFMLVKCLQL
                     NGKKGTFVAKVIKVFEFYLLCTLPVTLNLIVKMFVPHKENEHVLKFLEVKFGLNMTKN
                     FTLNWLLCQESLQAPSQDFFFRLTQSSLLPFYVLVLIICLLSMTQVFFRRMSGKSKKE
                     TVTLEDGRIGERPEIIYHVIHTLLLGSLAMLMEGLKFIWTPYVCMLAAFGVCSPELWM
                     TLLKWLRLRTVHPMLLALILSMAVPTIIGLSLWKEFFPRLITELTELQEFYDPDTVEL
                     MTWIKRQAPVAAVFAGSPQLMGVIKLCTGWTVTSLPLYSDDDLLQRNENIYQIYSKRS
                     AEDIYKILTSYKANYLIVEDAICNELGTTRGCRVKDLLDIANGHVVFEEGDKLTYSKY
                     GRFCHEVKINYSPYVNYFTRVYWNRSYFVYKVNTVISFQS"
     exon            139..246
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            247..371
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            372..462
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            463..584
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            585..730
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            731..854
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            855..989
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            990..1121
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1122..1220
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1221..1294
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1295..1453
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1454..1573
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1574..1694
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1695..1751
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1752..1834
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1835..1967
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1968..2126
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     exon            2127..6754
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      6726..6731
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /note="hexamer: AATAAA"
     polyA_site      6754
                     /gene="Dpy19l4"
                     /gene_synonym="Gm1023; Narg3"
                     /note="major polyA site"
ORIGIN      
        1 aggaagtggg ggcgcggcag ccgggagctg gccggggcgg ccgcggggtt tggatactcg
       61 gaggtttggg agactccggg ctgctcggga gccgtagggc cactcgggtc tccgcggaga
      121 cgatggcaaa ggaagaagga acatctgtag aaccccgcca aaggaaaaag caaagaactt
      181 caggaagtca ggaagccaaa gcagagaaga tccgcagaac cccagctcct gaaagagctc
      241 caaaatatgt gtcatttcaa cgttttgcaa agatcgtcat tggctgtctc gcagccgtta
      301 ttagtggtat gatgcatgtt ttctacttgt cagcttacca tgaacggaaa ttctggtttt
      361 ccaacaggca ggagctcgag cgagagatca ccttccaggg agacagcgct atttactact
      421 cctactataa agacatgctg aaggcgccgt cattcgagag aggtgtttat gagctgacgc
      481 acaataacaa aaccatctcc ctgaagacta tcaacgccat gcaacagatg tctttgtacc
      541 cagaacttat tgccagtgtt ctctatcaag caactggcag caatgaagtg atcgaaccag
      601 tgtatttcta cattggcatt gtgtttggat tacaaggaat gtatgtcacg gctttgtttg
      661 ttacaagttg gcttatgagt ggcacgtggc tagcagggat gcttactgtt gcgtggttcc
      721 taattaacag ggtggacaca acaagaatcg agtactccat tcctttaaga gaaaactggg
      781 ctctaccgta ttttgcatgc caagttgctg cacttacagg ctatttaaaa agaaatctaa
      841 atacttatgc agagaggttt tgctacctgt tgctgagtac ctcgacgtac actttcatga
      901 tggtgtggga gtacagccac tacgtcttgt ttcttcaggc agtatccctg ctgctgctag
      961 atatcttctc agtggaacaa agtgacaagg tttatgaagt atataaagtc tacatatttt
     1021 ctctcttcct tgggtattta ctacagtttg agaatccagc tttattggtg tctcctttat
     1081 taagtttagt aggagcgttc atgcttgtta agtgccttca gctgaatggg aaaaaaggaa
     1141 cttttgtggc taaagtaatc aaagtgtttg agttttactt gttatgtacc ctgccggtga
     1201 ccttgaatct tatagtgaag atgtttgtcc cacacaaaga aaatgagcat gtgctgaaat
     1261 ttcttgaagt caaatttgga ctaaatatga ctaagaattt cacactgaac tggctccttt
     1321 gtcaagagtc tctccaggcg ccgtcccagg attttttttt ccgattgacc caatcttccc
     1381 tgttgccatt ctatgtttta gtgttaatta tttgtcttct ttctatgaca caagtctttt
     1441 ttagaaggat gagtggtaag tctaagaaag aaactgtaac tcttgaagac ggaagaattg
     1501 gagaaaggcc agaaataatt tatcatgtaa ttcacactct gttgctgggc tctcttgcca
     1561 tgcttatgga aggcttgaaa ttcatttgga ctccttacgt gtgcatgttg gccgcgtttg
     1621 gtgtatgttc ccccgaactt tggatgacac ttttaaagtg gcttcgatta agaactgtac
     1681 acccaatgtt gttggctctt attctgagca tggcggtacc cactattata ggtcttagtt
     1741 tatggaaaga gttttttcca cgattaatta cagaattaac agaactacag gaattctatg
     1801 atccagatac agtggaactt atgacctgga taaagaggca agctccagtt gcagctgtgt
     1861 tcgcaggaag cccacagttg atgggtgtga ttaagctgtg tactgggtgg acagtgacaa
     1921 gcctgccact ttacagcgat gatgacctgc tccagagaaa tgaaaatatt taccaaatct
     1981 attcaaagcg atctgctgag gatatttata aaatcctgac atcttataaa gctaactacc
     2041 taattgtaga agatgccatc tgcaatgagc tgggaaccac gagaggctgt cgggttaaag
     2101 acttactaga tattgcaaat ggacatgtgg ttttcgaaga aggtgacaaa ttaacctatt
     2161 caaaatatgg acgattttgt catgaggtca aaattaacta ttctccatat gtgaattact
     2221 tcactagagt atactggaac agatcctact ttgtatataa agtcaacact gtgatttcct
     2281 tccaatcttg acaaataaca gagccttcat ttcacagaca tgttgcttga agtcaagtgc
     2341 agttttcttg agcctgcatg gtttctcaca gatagagagt gggcatctga aacgctgctg
     2401 ttcctcctgc acctgctgat tcctgggtta gagattcctt ggcagtagat gatgaggtgt
     2461 tgatgtcgtc cagtccacca ctgtgtcttt ctgacagctt tcttccttag tacatgacgt
     2521 aaagcttccc tgtagcgtca cctcacaaat cttacttcag aatatcagtc tttatttgaa
     2581 tattttccaa ggtcagtgtt tacttcaaaa acataatttt caattaagta cttcatgtga
     2641 tttaattcta tgatacaaga gaaaattctc cacggaagtc tgtaacagat gtaattattt
     2701 tacagtattt taaaaataat tgaaatgtta gttaaaatta tgtgacattt aaattaaagt
     2761 ggaaaaaaca taaagggaag ttgattgttt ttatgatgct gttcctgtca cctgctgctc
     2821 aagtgatcga gcacatcctt aggggaacag gacgaaccca tacatttaat tgtttcatga
     2881 ctattacatg attgcctttt ctcacttata ccctctaagt tgataacaat ttaatcatgc
     2941 taagacagca actcctgtta atagacacat acgtacacat gtaaatgaac atttaaaata
     3001 attttataat tgttttggat gtggagcata caatctagcc acattttctc tgaacatatt
     3061 aacactatca caacaacaat gtgtgcacta gcgtgcagca gtttctggag atgtatgcag
     3121 gtgcttttca gtgtaagagc aaaccactga gagttgagtt aacttctcca cagttcagtg
     3181 ctataaatgc tacgttccct catgtatttt catgttttta tcattaaagg aaattgtaag
     3241 ccagtgtggt gcctcacgcc tttaatccca gcactttcga ggcagaggca ggtgaatctc
     3301 tatgagtttg aggccagcct ggcctacata gtgagttcca ggacagcaca cagagcacta
     3361 taggtaaaac cctggtggtt ttttgagggg gtagggaaga aattctaaat taatatggcc
     3421 tcataaagag attcaggata gataaaagcc tgtagagaaa tggttttaat aagatgcata
     3481 tttaacttta catgataaaa ttgttttgtg aacaggttct ataattttat tttattagaa
     3541 tgctataaaa ttgcatttta agaactccaa attagaaaga aaaatatttc cttttttttg
     3601 gtaatgtata tgtacaattt ttttcaagtg tgtgcactta gagtaacgtc tagagcttaa
     3661 ctgacatctg ttctcccccc tcctccccgt ttagtgtaaa tggtcctgtt cactaatggt
     3721 cctgttcact aatgttcatg cttattttga ctaaacatgc agctgtggca ctgtatgtct
     3781 gatgaactct gaatatcttg gtagtcacta gtgtttaaca tcaggcttta tgaaaattac
     3841 cagctactca aatacacact gagtactcat gtggtcattc ttgtgatcag agcatgcaga
     3901 aacagcttac atattgtaaa gggggaagta taaaccgtat ttcccttgta atacgatttt
     3961 tttcaattcc cttataaaat gaattgagtt tttgacataa catgtgctaa gttagtttta
     4021 gtttttgttc tgtttgctgt atcagtaagc taagaatttt tttattaaaa gttcataatt
     4081 agtcccaggc atgatggtga actcttttaa tcccagcatt caggaggagc agtagcaggc
     4141 agttctctgg gttcgaggcc agtctggatt acatagtgtg taccaggata gccaaagcta
     4201 cccccacccc cccaaaaaag gtttaaaatt aatttttcat tcagcatcac ctgaaagaag
     4261 aagtattata gaaatggcac tattggctga ggatgtgtca atcagtagca tggcgctggg
     4321 ccagcacaca caagtccctg ggttcagctc ctagcaccat ggtggggggg gagggagtgg
     4381 gcagagaagg gcagacaaat gaagaaaaga ctgaaatgat aatattaggt atcatagata
     4441 tgttgattca cttccatctg gactgtcact aagacaacac tatgttgttg caagcattta
     4501 acttttttct ttagtgattt gtggagtaac aagtaaaagg tcctactgct tgctattcta
     4561 agtacttatt atatacttgg gtaaccgagc cgctgctagg atcagccgta aagctgcgct
     4621 gaagggtcag ccgtaaagct gcactgaggg gcagagtttg caggatgtgg gtgggaggaa
     4681 ttcctcaaag aaagattgaa catatttgct cttaatataa caaacccatt gaaataagtg
     4741 ccttaacttc tttatttcta aatccatctt atactttatg tcatattacc tgttttcttt
     4801 tccataagaa actgctgtta acttttgcca catgggtaaa gttgagtgag gtgaggctta
     4861 ggcccctccc tccctccctc ccatgtgtat gcgtgtgtat gcgtgtgtat gcgtgtgtat
     4921 gcgtgtccta gtgcccttcc ctactataca agagcttctg ggcttcatcc ccagcacaac
     4981 aaaacattaa gccaccccac accattttca tgattagctt caattcacta aaaagcaaat
     5041 ctttgtcaag aatttccagt cttctgaatt aattaattaa tttaggccct tgcatgccaa
     5101 atagtccaac atgtgaaacc tacttgataa gggatgtaat atggactctg gatgtaatat
     5161 ggactctgtg aaacctactt gataagggat gtaatatgga ctctgtgagt ttagtaattt
     5221 tttaaaaatc tctttggcat ctgtatcttg atgttttgca ttttattggc agtttagttt
     5281 tacaatctaa gtagtatact acactccagt actgacttta tacacatata cacacacata
     5341 cacagagaca gacagacaca cagacacaca gagacagaca gacagataga cacacagaga
     5401 cagacccaca gacagtggct tttctgtcta ggacattaac ataagttgcc aataacctca
     5461 gtgttctgac acttttccac aatgtacata ttgagtcaac aaagaatgaa gaaatgggtg
     5521 ttaataattt gtggctgaaa accatgccta aaatagatta ttaatttctt ttataactct
     5581 cttattagtt ttgagaaatc tttcttgagg ctttttattt ttgagttagt aacacgtttt
     5641 gctgtctctt tttgtataaa aattgtattt tttttcagtt ggggttttta acagttctat
     5701 gtagattgat cttttagtaa atttattttt aatgcatgaa tatttataga acatgtgtta
     5761 ctacttctgt atatttaaga acattttaaa gctcataact actttctaat ttatatttta
     5821 gtgtattctt tcttttaaaa tatctagttt tgctgtgtgt ggtgatgcac atctctgatc
     5881 ctagcccgtg agaggtagag acgggaggat caagtgttca gagtcatcca cagctacaga
     5941 aatgagtttg aggccagcct gggcttcatc cacagctaca gaaatgagtt taggccagcc
     6001 tgggcttcat gagtccctat ctcaaaaaaa gatccaaaaa ttaaatacac agtctctatt
     6061 gttactgttt gctgtagctt tagactcaat atgtattaga aatctggcaa attacaggga
     6121 aaatcaaaca agttcttacc tgaattactg aagttttttc ttaatgtata gagttaatgc
     6181 tttaaatcaa attagattca gtgttgcaaa gaaatatata tgacagctta ttttctgtct
     6241 agtgaaattt ctaaataata tatgtgtttc tgtaatgaaa attacatttt ggaatcaaat
     6301 gtgctgaatt tagtataaag gattctttgt attgttctgt aatcttgaca attcttgtgt
     6361 aattctatga cctttactta tgaccatcat ctatattttg tgtaatagtt gaataacaga
     6421 aaatatcaaa taagttacct tttcctgttt taagccaata gcctgtacag gtacttatcc
     6481 agaatgaaca cagctgcctt tattaggttg acctccgagt catgactgtg atgtttagag
     6541 taaatgttac ctcctgtaaa taagcttaca tctctgtaaa agtgtaaatc gttagtgaat
     6601 acagatacct taaaggactt gtttataagt ataaacagtt ttattccagg ttttgtaacg
     6661 ttaataccct tttatcacta ataatgttct ttcatgctca tttatcctcc ttgttttgtg
     6721 ttcataataa aacttctcag atttttaaac tgtc
//
