LOCUS       XM_006511237            7927 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus DOP1 leucine zipper like protein A (Dop1a),
            transcript variant X5, mRNA.
ACCESSION   XM_006511237
VERSION     XM_006511237.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006511237.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7927
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..7927
                     /gene="Dop1a"
                     /gene_synonym="B130005I07Rik; C130028L17; D9Ertd809e;
                     Dopey1"
                     /note="DOP1 leucine zipper like protein A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 26 ESTs, 426 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 19 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:320615"
                     /db_xref="MGI:MGI:1289294"
     CDS             210..7622
                     /gene="Dop1a"
                     /gene_synonym="B130005I07Rik; C130028L17; D9Ertd809e;
                     Dopey1"
                     /codon_start=1
                     /product="protein dopey-1 isoform X4"
                     /protein_id="XP_006511300.1"
                     /db_xref="GeneID:320615"
                     /db_xref="MGI:MGI:1289294"
                     /translation="MNTEELELLSDSKYRNYVAAIDKALKNFEYSSEWADLISALGKL
                     NKVLQNNAKYQVVPKKLTIGKRLAQCLHPALPGGVHRKALETYEIIFKIIGPKRLAKD
                     LFLYSSGLFPLLANAAMSVKPALLGLYEMYYLPLGKTLKPGLQGLLTGILPGLEEGSE
                     YYERTNTLLEKVAAAVEQSAFYSALWGSLLTSPAVRLPGITYVLAHLNRKLSMEDQLY
                     IIGSDIELMVEAVSTSVQDSSVLVQRSTLDLILFCFPFHMSQATRPDMIRILSAALHV
                     VLRRDMSLNRRLYAWLLGFDNNGAIIGPRSTRHSNPEEHATYYFTTFSKELLVQAMVG
                     ILQVNGFGEESTLMQDLKPFRILISLLDKPELGPVILEDVLIEVFRTLYSQCKAELDL
                     QMEPPFSKDHAQLSSKLRENKKTAELIKTANLLFNSFEPYYMWDYIARWFEECCRRTL
                     HARLQVGPGDSSDSSELQLTNFCLLVDFLLDIVSLETYIEIQTEHLPQLLLRMISALT
                     SHLQTLRLSELTDSLRLCSKILSKVQPPLLSAGNGGVVQFPSGQNSTVKEWEDKKQVS
                     SVSMENPAEVFEDGENPPSSRSSESGFTEFIQYQADRPDDLDRELNGQGAATIPIGST
                     SSETETASTVGSEETVIQPPSTFTQGAAGRSGKAVQKTAMQCCLEYVQQFLSRLINLY
                     IIHSDSFPQALAADHQGDFSRIQRETSKWDRDSQGDAKERNIHTPKTSKEYLSAFLAA
                     CQLFLECSSFPVYIAEGNHTSESHSEKPDTDCEHAHPPQWLRTLMSACSQARDFRVQS
                     AAVSLVMDLVGLTQSVAMVTGENINSMEPAQPLSPNQGRVAVVIRPPLTQGNLKYIAE
                     KTEFFKHVALTLWDQLGDGTPQHHQKSVELFYQLHNLVPSSSICEDVVSQQLTHKDKK
                     IRMEAHAKFAVLWHLTRDLHINKSSFARSFDRSLFIMLDSLTSLDGSTSSVGQAWLNQ
                     VLQRHDIARVLEPLLLLLLHPKTQRVSVQRVQAERYWSKTSCYPGEENDKHFMQNFTC
                     NNVSQVHLIASKGNGEKPLTMDEMENFSLTVNPLSDRLSLLSTSSETIPMVVSDFDLP
                     DQQMEILQSSDSGCSQSSAGDNFSYEVDPENANAHEDSHMAKASSPDDDVQQVVFDLI
                     CKVVSGLEAESESVTSELEIESLQTKSSDLDPGKEATKIEDQAPQHSQHVLLSDDSPR
                     FLSVSTEEGCECLANGISRNSSSPCISGTAQTLNDSSVPSETKSRQRSHSSIQFSFKE
                     KLSEKVSEKETIVKESGKQPGAKPKVKLARKKDEDKKKAASEKLKQANVFFSEGLDLE
                     NWYSCGEGEISEIESDMGSPGSRKSPNFNIHPLYQHVLLYLQLYDSSRTLYAFSAIKS
                     ILKTNPIAFVNAISTTSVNNAYTPQLSLLQNLLARHRISVMGKDFYSHIPVDSNHNFR
                     SSMYIEILISLCLYYMRSHYPTHVKVTTQDLIGNRNMQMMSIEILTLLFTELAKVIES
                     SAKGFPSFISDMLSKCKVQKVILHCLLSSIFSVQKWHSEKTAGKSMVAVEEGFSEDSL
                     INFSEDELDNGSTLQSQLLRVLQRLIVLEHHVMTIPEENEAGFDFVVSDLEHISPHQP
                     MTSLQYLHAQPITCQGMFLCAVIRALHQHCACKMHPQWIGLITSTLPYMGKVLQRVVV
                     SVTLQLCRNLDNLIQQYKYETGLSDSRPLWVASIIPPDMILTLLEGITAIIHYCLLDP
                     TTQYHQLLVNVDQKHLVEARSGILSILHMIMSSVTLLWSILHQADASEKMAVAASASV
                     TTINLGATKNLRQQILELLGPISMNHGVHFMAAIAFVWNERRQNKTPSRTKVIPAASE
                     EQLLLVELVRSISVMRAETVIQTVKEVLKQPPAIAKDKKHLSLEVCMLQFFYAYIQRI
                     PVPNIVDSWTSLLVLLKDSIQLSLPAPGQFLILGVLNEFIMKNPSLENKKDQRDLQDV
                     THKIVDAIGAIAGSSLEQTTWLRRNLEVKPSPKIMVDGTNLESDVEDMLSPAMETSNI
                     TPSVYSVHALTLLSEVLAHLLDMVFYSDEKERVIPLLVNIMHYVVPYLRNHSAHNAPS
                     YRACVQLLSSLSGYQYTRRAWKKEAFDLFMDPSFFQMDASCVSHWRAIMDNLMTHDKT
                     TFRDLMTRVAVAQSSSLNLFANRDVELEQRAMLLKRLAFAVLSSESDQYQKYLPDIQE
                     RLVESLRLPQVPTLHSQVFLFFRVLLLRMSPQHLTSLWPTMITELVQVFLLMEQELTA
                     DEDISRTSGPSAAGLETTYTGGNGFSTSYNSQRWLNLYLSACKFLDLALALPSENLPQ
                     FQMYRWAFIPEASDDSGLEVRRQGIHQREFKPYVVRLAKLLRKRAKDEEDFKILEGLE
                     MAKHQKNPEEDCSGRTLGWEPGHLLLTLCTMRNMEQLLPFFNVLSQVFNSKVTSRCGG
                     HSGSPVLYPNSFPNKDMKLENHKAFSSKARQKIEEMIEKDFLEGVIKT"
ORIGIN      
        1 cgggggcggg gacggaggcc gccgacgtcg acgccggcgt gggcgcgcgc ggtgcacgct
       61 ggtagctgtc actaggccct gggctggcgg ccttcgtgcg gctgccgcgg ttgccaagag
      121 agcggcgcca gcggggagca gcagagcccg cggcagggaa tgattttgca tgactttgga
      181 actggtgtct agtagaacac ggtgggagaa tgaacacaga agagctagag ttattgagtg
      241 actccaaata cagaaactat gtagctgcca ttgacaaagc actaaagaat tttgaatact
      301 ccagtgaatg ggcagacttg atctcagcac ttggaaaact caacaaggtt ttacaaaata
      361 atgccaagta ccaggtagta cccaaaaaac tgaccatagg caaacgccta gctcaatgtc
      421 tgcacccagc attaccaggt ggggttcatc ggaaagcact tgaaacctat gaaatcatct
      481 tcaaaatcat tggccctaag cgacttgcca aagatctctt tttatatagt tctgggttgt
      541 ttcctcttct tgccaatgct gctatgtctg tgaagccagc actgctcggt ttgtatgaga
      601 tgtactactt gcccttgggg aaaaccctga aacctggtct ccaggggttg ctgactggta
      661 tccttcctgg cttagaagaa gggtcggagt attatgagag aacaaacacc ctgctggaaa
      721 aggttgctgc ggctgtagag cagtctgcat tctacagtgc cctatggggc agtctgctca
      781 ccagtcctgc tgtgcgctta cctggaatca catatgttct ggcccatctg aacaggaaac
      841 tttcaatgga agatcagctg tatataattg gcagcgacat tgagctcatg gtagaagcag
      901 taagcacttc agtgcaggac tcgagtgtac ttgtacagag aagcacgctg gacctcatcc
      961 tcttctgttt cccattccat atgagtcagg ccactcgacc agatatgatc aggatcttgt
     1021 cagcagccct tcatgtagta ctaaggaggg atatgtcctt gaaccgaaga ctttatgcat
     1081 ggcttcttgg ttttgataac aacggtgcta tcataggacc aaggagcaca cgacacagta
     1141 atcctgaaga acacgccact tactatttta caaccttttc aaaagaattg ttagtccagg
     1201 ccatggtggg gatcttacaa gtgaatggat ttggagaaga aagcactctc atgcaggatc
     1261 taaaaccttt tcgtatttta atcagtttat tggacaaacc tgaactagga cctgtaatcc
     1321 tagaagatgt tctgattgag gtgtttagaa ctttgtattc tcagtgcaaa gcagaattgg
     1381 atcttcagat ggaaccaccc ttcagcaagg accatgctca attaagcagt aaattaaggg
     1441 aaaataagaa aacagccgaa ctgattaaaa ctgcaaatct gctttttaat tccttcgaac
     1501 cttattatat gtgggattac attgcacgct ggtttgaaga atgttgtcgg agaactctgc
     1561 acgccagact tcaggttgga cctggagaca gtagtgattc gtctgagtta caactgacta
     1621 atttctgctt actggtggat tttttgttgg atatagtctc cttggagacc tatattgaaa
     1681 tccagacaga acacctgccc cagttactgc ttagaatgat ttctgccttg acaagccatc
     1741 tccagacatt gcgcttatct gagctcacag actctttaag gctctgctcg aagatcctta
     1801 gcaaggttca gcccccattg ttatctgctg gcaatggagg tgtggtacag tttccaagtg
     1861 ggcagaacag tacagtcaaa gaatgggaag acaaaaagca ggtatcatca gtttctatgg
     1921 aaaatcctgc tgaagtattt gaagatggag aaaatccacc aagtagtcga tcatcagaaa
     1981 gtgggttcac tgagtttatc cagtatcaag cagaccggcc tgacgacctc gacagagagc
     2041 tgaatggaca gggggcagct accatcccaa ttggcagcac atcttcggaa acagaaacag
     2101 catccacagt gggttctgag gaaaccgtca tccagccacc ttccaccttc actcaggggg
     2161 cagcaggccg aagcgggaag gcggtacaga agactgcaat gcagtgctgc ttggagtatg
     2221 tccagcagtt tctttccagg ctcatcaacc tctacatcat ccacagtgac tcctttcctc
     2281 aagctttggc tgcagatcat cagggagact tcagtcgaat acaaagggag acttcaaaat
     2341 gggacaggga ttcccaaggg gatgcaaaag aaagaaacat acatactcca aaaacatcaa
     2401 aagaatacct ttctgccttc cttgctgcct gtcagctctt cttagagtgc tcaagtttcc
     2461 cagtctacat cgctgaggga aaccatacat cagagtcaca ttctgagaaa ccggacactg
     2521 actgtgagca cgcccaccct ccacagtggc tccggacgct gatgagcgct tgcagccaag
     2581 cacgtgattt cagggttcag agtgctgctg tgtctctagt catggacctg gtgggactga
     2641 ctcaatctgt tgccatggtc actggagaaa acatcaacag catggagcct gcacaaccct
     2701 tgagtccaaa ccaaggaaga gtggctgtgg ttattagacc tcccctcaca cagggcaacc
     2761 tgaagtatat agctgagaag actgaatttt tcaagcatgt ggccttaaca ttatgggacc
     2821 agctgggaga tgggacacct cagcaccatc agaagagtgt ggaactattt tatcaattac
     2881 ataatttggt tccttcttct agcatctgtg aggacgttgt aagtcagcag ttaacccata
     2941 aagacaagaa aataaggatg gaagcacatg caaaatttgc agttctttgg catctaacaa
     3001 gggatctcca cataaataag tcatcttttg cacgttcctt tgacaggtca ctgttcatca
     3061 tgctagatag ccttactagt ttagatggtt ctacgagctc tgtgggacaa gcctggctga
     3121 accaggtgct acaaaggcat gacattgcaa gggtgctgga accactgtta ctgctcctgc
     3181 ttcatccaaa aactcagagg gtttcagtgc agcgggtaca agcagaacgg tactggagta
     3241 agacgtcctg ttatccagga gaggaaaatg ataagcattt catgcaaaat tttacctgca
     3301 acaatgtaag ccaagtgcac ctcattgcat ccaaaggaaa tggtgaaaag ccccttacca
     3361 tggatgaaat ggagaatttc agtcttactg ttaatccatt gagtgataga ctttccctcc
     3421 taagcaccag cagcgagacg attccaatgg ttgtatctga ctttgacctc ccagatcagc
     3481 agatggaaat acttcagagc tctgactctg gatgctcaca gtcttctgct ggagacaact
     3541 ttagttacga agttgatcct gaaaatgcga atgcccatga agattctcac atggcaaagg
     3601 caagctcccc agatgatgat gttcagcaag ttgtctttga cctgatatgt aaagttgtga
     3661 gtggcctgga agcagagtct gaatcagtta catctgaatt agaaatcgaa tctctgcaaa
     3721 caaagagtag tgacttagat ccaggtaaag aagcaactaa gattgaagac caggcccctc
     3781 aacacagcca gcatgttttg ctgagcgatg acagccctcg gtttctgtct gtgtctacag
     3841 aggaaggctg tgagtgcttg gccaatggaa tctccagaaa tagctcctca ccttgcattt
     3901 caggaacagc acagactctg aacgattctt ctgttccctc agaaaccaaa tctagacaga
     3961 ggagtcacag tagtattcaa tttagcttca aagaaaaatt atcagaaaaa gtctcagaga
     4021 aagaaacaat tgttaaggaa tcaggtaaac aaccaggtgc aaaacccaaa gtaaagctgg
     4081 ccaggaaaaa agatgaggac aagaaaaaag ctgcaagtga gaaactgaag caagcaaatg
     4141 tcttcttcag tgagggcctg gacttagaga actggtacag ctgtggggag ggcgaaattt
     4201 ctgaaattga gagtgacatg ggttctccag gatctaggaa atctcccaac ttcaacatcc
     4261 atcctctcta tcaacacgtg ctcctgtatc tgcagctgta tgattcatcg aggactctgt
     4321 atgctttttc tgccatcaaa tccatcttga aaactaaccc cattgctttt gtaaacgcca
     4381 tttcaacaac aagtgtaaac aatgcataca cccctcagct gtctctgctt cagaacctgc
     4441 tggctagaca ccgaatctct gttatgggca aagactttta cagtcacatt ccagtggatt
     4501 caaaccataa cttccggagt tccatgtaca ttgaaattct tatttccctc tgcttatatt
     4561 atatgcgtag ccattaccca actcatgtca aggtcactac ccaagactta ataggcaatc
     4621 gaaacatgca aatgatgagc atagaaatct tgactctcct ctttacagag ctagcaaaag
     4681 taatagagag ctctgcaaag ggtttcccta gttttatctc tgatatgctg tctaagtgca
     4741 aagttcagaa agtgattctt cattgtttgc tgtcgtctat cttcagcgta caaaagtggc
     4801 acagtgagaa aacagcaggt aagagcatgg ttgctgtgga ggagggcttc tcagaagaca
     4861 gcctcatcaa tttctcagag gatgaacttg acaatggcag cacactgcag tcgcagcttc
     4921 tgagggtgct tcagaggctg attgttctag agcaccacgt gatgactatt cctgaggaga
     4981 atgaagcagg ctttgatttt gttgtgtctg atctggaaca tatcagtccc catcagccca
     5041 tgacttctct tcagtattta catgctcagc caatcacatg tcaaggcatg ttcctctgtg
     5101 cagtgattag agctttgcat cagcactgtg catgtaagat gcatccacaa tggattggct
     5161 taatcacttc cactctgcct tacatgggaa aagttctaca aagagtcgtg gtttctgtga
     5221 cactacagct gtgcaggaat ttggataatc taattcagca gtacaaatac gaaacaggat
     5281 tatctgatag taggcctttg tgggtggcat caattatccc accagatatg attcttactc
     5341 ttttggaagg aatcacagcc attatccatt actgcttgct ggatccgact acccagtatc
     5401 atcaactttt ggtcaatgta gatcagaaac acttggttga agctcgcagt ggaatcctct
     5461 caatccttca catgatcatg tcctctgtaa ctctgctttg gagcatactg caccaggctg
     5521 atgcttcaga aaagatggca gttgctgcat ccgcgtctgt tactacaatc aatctgggag
     5581 ccacaaagaa cttgagacaa caaatcctgg aattactggg acccatttca atgaatcatg
     5641 gtgttcattt catggctgcc attgcatttg tatggaatga aagaagacag aacaaaaccc
     5701 cttccagaac aaaggtcatc cctgcagcca gtgaagaaca gcttttacta gtagaactgg
     5761 ttcgctccat cagtgtcatg agggcagaaa ctgttatcca gactgtgaaa gaagttttaa
     5821 agcagcctcc agccatagcc aaggacaaga aacatctttc tctggaagtc tgcatgcttc
     5881 agtttttcta cgcttatata caaagaattc cagtgcccaa tatagtggac agttggacat
     5941 cattattggt ccttctaaaa gattctatac agctgagtct gccagcccca gggcagtttc
     6001 ttatacttgg ggttttgaat gagtttatta tgaaaaaccc tagtttggaa aataaaaagg
     6061 accaaagaga ccttcaggat gtgactcaca aaatagtgga tgctattggt gcaattgctg
     6121 gttcctctct ggaacagaca acatggctcc gacggaatct ggaagttaag ccttctccca
     6181 aaataatggt ggatggaacc aatttagagt ctgatgttga agatatgtta tcccctgcaa
     6241 tggaaacctc aaacataact ccttctgtat atagtgtcca tgcactgacg ttgctctcag
     6301 aggtattggc tcatcttctg gatatggttt tctacagcga tgaaaaagag cgtgttatcc
     6361 ctttacttgt aaacattatg cattatgttg taccctacct ccgaaatcac agtgcacata
     6421 atgcccctag ttaccgagcc tgtgtccagc tgctcagtag tcttagtggg tatcagtata
     6481 caaggagagc ctggaaaaaa gaagcctttg acctttttat ggatcccagc ttctttcaga
     6541 tggatgcttc ctgtgttagt cactggagag caatcatgga caacctgatg acacatgata
     6601 agacaacctt cagagatttg atgactcgag tagccgtggc ccagagcagt tctctcaatc
     6661 tttttgcaaa ccgggatgtg gagctagaac agcgagccat gcttctcaaa agactggcct
     6721 tcgccgttct tagcagtgaa agtgaccagt accaaaagta ccttccagac atacaagaga
     6781 gattggttga gagtctccgt ttgccccagg tgccgaccct tcactctcaa gtgttcctgt
     6841 ttttcagagt gttactttta agaatgtctc cacaacacct cacctcactc tggcctacca
     6901 tgatcacaga acttgtgcag gtgttcttac tgatggagca ggagctcact gctgatgaag
     6961 atatttcacg gacgtcaggg ccgtctgctg ctggtctgga gacaacctat actggaggta
     7021 atggcttctc cacatcatat aacagccaga ggtggttaaa cctctatctc tctgcttgca
     7081 agtttttgga tttggctctg gcattgccct ctgaaaatct tcctcagttt cagatgtacc
     7141 gatgggcctt tattcctgaa gcttcagatg actcgggctt agaagtcaga aggcagggca
     7201 tacatcagcg agaatttaag ccatatgtgg ttcgactagc aaaacttctt cggaagaggg
     7261 caaaggacga ggaggacttt aagattttgg agggattgga gatggccaag catcagaaaa
     7321 acccagagga agactgctcg gggaggacac tgggctggga gccagggcac ttgctgctga
     7381 cgctctgcac catgcgcaac atggagcagc ttctgccttt cttcaatgtc ctcagccaag
     7441 tcttcaacag caaagtcaca agccgctgtg gcggacactc agggagcccc gtcctctacc
     7501 caaactcctt cccaaacaag gacatgaaac tggagaatca caaagccttt tccagcaaag
     7561 ccaggcaaaa aattgaagag atgatagaaa aggactttct agaaggagtc ataaagactt
     7621 gaccaccacc agtggttctc cagagcctaa atggaatact taaaacacac tgctgagttg
     7681 tatagtttct ttttctttta tatatatata tatgtgtata tgtaacaaag cattattcag
     7741 gttgtattta atttaaatat ttgtaaataa gagcttatgt ctgaatgtgg cctgaatcaa
     7801 gtttaaatat ataggtggct catactgatg atggtgccta caaggtctat atttgcatat
     7861 atagtccatt gtttcactgt cttgggttgt cttaaacctg caaaatacac accacgtttt
     7921 ctttttt
//
