LOCUS       NM_134081               1631 bp    mRNA    linear   ROD 06-FEB-2024
DEFINITION  Mus musculus DnaJ heat shock protein family (Hsp40) member C9
            (Dnajc9), mRNA.
ACCESSION   NM_134081
VERSION     NM_134081.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. PMID: 29144450]
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CX238858.1 and AK077324.1.
            
            [WARNING] On Mar 31, 2024 this sequence was replaced by
            NM_134081.6.
            
            On Dec 8, 2009 this sequence version replaced NM_134081.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK077324.1, SRR1660817.305433.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-62                CX238858.1         1-62
            63-1631             AK077324.1         33-1601
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 11.53 cM"
     gene            1..1631
                     /gene="Dnajc9"
                     /gene_synonym="5330419I01Rik"
                     /note="DnaJ heat shock protein family (Hsp40) member C9"
                     /db_xref="GeneID:108671"
                     /db_xref="MGI:MGI:1915326"
     exon            1..307
                     /gene="Dnajc9"
                     /gene_synonym="5330419I01Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             128..907
                     /gene="Dnajc9"
                     /gene_synonym="5330419I01Rik"
                     /note="DnaJ (Hsp40) homolog, subfamily C, member 9"
                     /codon_start=1
                     /product="dnaJ homolog subfamily C member 9"
                     /protein_id="NP_598842.1"
                     /db_xref="CCDS:CCDS26844.1"
                     /db_xref="GeneID:108671"
                     /db_xref="MGI:MGI:1915326"
                     /translation="MGLLELCEQVFGTADLYQVLGVRREASDGEVRRGYHKVSLQVHP
                     DRVEEDQKEDATRRFQILGRVYAVLSDKEQKAVYDEQGTVDEDSAGLNQDRDWDAYWR
                     LLFKKISLEDIQAFEKTYKGSEEELNDIKQAYLDFKGDMDQIMESVLCVQYTDEPRIR
                     NIIQKAIESKEIPAYSAFVKESKQKMNARKRRAQEEAKEAELSRKELGLEEGVDNLKA
                     LIQSRQKDRQKEMDSFLAQMEAKYCKPSKGGKRTALKKEKK"
     exon            308..448
                     /gene="Dnajc9"
                     /gene_synonym="5330419I01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            449..703
                     /gene="Dnajc9"
                     /gene_synonym="5330419I01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            704..790
                     /gene="Dnajc9"
                     /gene_synonym="5330419I01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            791..1631
                     /gene="Dnajc9"
                     /gene_synonym="5330419I01Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcgcttctc ctgtgacgca ggcgcccaga gttatttggg cgggaaaagg cggccggcgg
       61 tccgctgtcc agcagagcgg ctgtggctac agcttccccg ggttcgcgga gcagcctctt
      121 ccctggcatg gggctgctgg agctgtgcga gcaggtgttt ggcaccgccg acctctacca
      181 agtgctgggc gtgcggcgcg aggcttcgga cggcgaggtc cgacgcggct accacaaagt
      241 gtccctgcaa gtgcaccccg accgagtaga ggaggaccag aaagaggacg ccacccgccg
      301 cttccagatc ttgggaagag tctacgcggt tctgagtgac aaggaacaga aagcagtgta
      361 cgatgaacag gggacagtgg acgaagactc tgctggcctc aaccaagacc gggactggga
      421 tgcatattgg agattactct ttaaaaagat atcgctagag gatatccaag cttttgaaaa
      481 gacatacaaa ggctccgaag aagagctaaa cgatattaag caggcctatc tggacttcaa
      541 gggcgacatg gaccagatca tggagtctgt actttgtgta cagtacacag atgaacccag
      601 gataagaaac atcattcaaa aagctattga atccaaagag attccagcct acagcgcctt
      661 cgtcaaagag tctaaacaaa agatgaatgc aaggaaaagg agggctcagg aagaggctaa
      721 agaagcagag ttgagcagaa aggagctggg actggaagaa ggagtggata acttgaaagc
      781 actcatccag agcagacaaa aggatcggca aaaggaaatg gacagttttc tggctcaaat
      841 ggaagcaaaa tactgcaaac cttccaaagg agggaaaaga acagcactca agaaggaaaa
      901 gaaatgatgg agtttttctc ttcctgagtc cttatgtgtc agtggtacag tgtagacaaa
      961 atgatgacag ccattaatgt aacctttgag aggagttgtc tgtcccgcct aagccgagca
     1021 gggttcatcg acctgatctt agtagtttct agaattcgcc taacactgtg tgagggtttc
     1081 atgtgaagga tgtgtagtgg tgatagttgg gagggtgggt ctgacatttg cttttgtggg
     1141 cccctattta gaatattagt ttctcttgct gctgtgcatg cactgacgag aaacactcca
     1201 cctatggaga acatcctcag aacacttgct gaaccgctga cttctaaata aatgctaccg
     1261 tgcttttggg tcttaatcct acacggatct tcttttcttg gtctactgtt aggttttgtc
     1321 ttctgtcctt gcagtaggag acgtcagtgt tcatattatt gcaaactttt cataagactg
     1381 tatatgctaa ataaagaaga aatgacaaag gtctggtgga ttatttaaat gactccattg
     1441 gtctatgaag ataaagtgtt ttatttaaag gacttaagta acctagtcag cattgtaaca
     1501 gacaggctgg ctttggcaca catcctgtct ttgcaggtca caggcttagg catttcactg
     1561 gcctcttttg aactttttat ctacaagagt gagagccaaa ttcattaaat tgcatttatt
     1621 aagtacagca g
//
