LOCUS       NM_001033165            1827 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus DnaJ heat shock protein family (Hsp40) member C25
            (Dnajc25), mRNA.
ACCESSION   NM_001033165 XM_131409 XM_884802 XM_895801 XM_895824
VERSION     NM_001033165.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BI133646.1, AK136359.1, BX512063.1, AI480957.1 and BM951172.1.
            
            On Jun 17, 2009 this sequence version replaced NM_001033165.2.
            
            CCDS Note: The coding region has been updated to extend the
            N-terminus to one that is more supported by available conservation
            data. The use of an alternative upstream start codon would result
            in a protein that is 119 aa longer at the N-terminal.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK136359.1, SRR7345562.1163067.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-364               BI133646.1         1-364
            365-786             AK136359.1         59-480
            787-1221            BX512063.1         77-511
            1222-1421           AI480957.1         9-208               c
            1422-1827           BM951172.1         68-473
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 32.36 cM"
     gene            1..1827
                     /gene="Dnajc25"
                     /gene_synonym="2010109C08Rik; 2010203O07Rik"
                     /note="DnaJ heat shock protein family (Hsp40) member C25"
                     /db_xref="GeneID:72429"
                     /db_xref="MGI:MGI:1919679"
     exon            1..365
                     /gene="Dnajc25"
                     /gene_synonym="2010109C08Rik; 2010203O07Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..1112
                     /gene="Dnajc25"
                     /gene_synonym="2010109C08Rik; 2010203O07Rik"
                     /note="dnaJ homolog subfamily C member 25; DnaJ (Hsp40)
                     homolog, subfamily C, member 25"
                     /codon_start=1
                     /product="dnaJ homolog subfamily C member 25 precursor"
                     /protein_id="NP_001028337.2"
                     /db_xref="CCDS:CCDS18216.2"
                     /db_xref="GeneID:72429"
                     /db_xref="MGI:MGI:1919679"
                     /translation="MAARLALRGGPGAAGQRPWLLLAPLLLVPLLARPAEALVEGLYC
                     GTRDCYEVLGVSRSASKAEIARAYRQLARRYHPDRYRPEPGDGPGGAPPSAEAFLLVA
                     TAYETLKDEETRKDYDYMLDHPEEYYSHYYHYYSRRLAPKVDVRVVILVSVCAISMFQ
                     YFSWWNSYNKAISYLATVPKYRIQATEIAKEQGLLKKAKEKGKNKKSKEEIRDEEENI
                     IKNIIKSKIDIKGGYQKPQVRDLLLFQVILAPVHLCSYIAWYCRWIYNFNIKGKEYGE
                     EERLYIIRKSMKMSQSQFDSLEDHQKEMFLKRELWIKENYEVYKQEQEEELKKKLAND
                     PRWKRYRRWMKNEGPGRLTFVDD"
     exon            366..518
                     /gene="Dnajc25"
                     /gene_synonym="2010109C08Rik; 2010203O07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            519..989
                     /gene="Dnajc25"
                     /gene_synonym="2010109C08Rik; 2010203O07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            990..1827
                     /gene="Dnajc25"
                     /gene_synonym="2010109C08Rik; 2010203O07Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1421
                     /gene="Dnajc25"
                     /gene_synonym="2010109C08Rik; 2010203O07Rik"
                     /note="major polyA site"
ORIGIN      
        1 gcggccgctg tgctggcaga gcggcgagcg aggcggggat ggcggcgcgg ctcgctttgc
       61 gcgggggacc cggggctgcc ggccagcgcc catggctgct gctggcgccg ctgctgctgg
      121 tcccgctgct ggcgcggccc gccgaggccc tggtggaagg gctgtactgc ggcacgcgcg
      181 actgctacga ggtgctgggc gtgagccgct cggccagcaa ggcggagatc gcgcgggcct
      241 accgtcagct ggcccggcgc taccacccag atcgctaccg gcccgagccc ggggacggcc
      301 ccgggggcgc gccgccgagc gccgaggctt tcctgctagt ggcgaccgcc tacgagacgc
      361 tcaaggatga agaaacacgg aaggattatg actacatgct ggatcaccca gaagaatact
      421 atagccatta ctaccactac tacagcaggc gcctggcccc aaaagtggac gttagggtgg
      481 tgattttggt cagtgtgtgt gccatttcaa tgtttcagta tttcagctgg tggaatagct
      541 acaataaagc aatcagctac ctagccacag tgcccaagta ccgcatccag gcaacagaaa
      601 tcgccaagga gcagggactg ctcaaaaaag ccaaagaaaa agggaaaaac aagaagtcca
      661 aagaagaaat ccgtgatgag gaggagaaca tcataaagaa cattataaaa agtaaaatag
      721 acataaaggg gggctaccag aaaccccaag ttcgggacct cctcttgttt caggtcatcc
      781 tcgcccctgt tcacctgtgc tcttatatag cctggtattg taggtggatc tataacttta
      841 acatcaaagg caaagagtac ggggaggaag agagacttta cattatccgg aagtctatga
      901 agatgtccca gtctcagttt gacagcctgg aggaccatca gaaagaaatg tttctcaagc
      961 gggagctttg gataaaggag aattatgagg tctacaagca ggaacaagag gaagaattaa
     1021 agaaaaaatt ggcaaatgac cctcggtgga agcgctaccg caggtggatg aagaatgaag
     1081 ggcctggacg gctgaccttt gtggacgact gaagaagctg aggtgctgct gtgccacact
     1141 ctaattgtga cgacacttgc atagcagtta cttgggaaac acgcctgctg ctctcagcag
     1201 tagctaacgt tcaaaacata tgattaaaca gaataatgta gaaatttcta ctttccctta
     1261 aaactttata cagaagacat ttatgatggt tcaattttta taatctattt gtggattttg
     1321 tttaaaaaga tttcacatgg ggacttatta gttgccattt aaaattttta tatgtttagt
     1381 taaatttgac atgaaattta ttagatacca tttaaaactt ctgtgtgaag tgtttcttct
     1441 tcaagagtgt ttgcttatgt tctcataatg ctaattttcc tcctttcctg gtctccagtt
     1501 ttacaaaaca acaacagaat aatgacaaca gcacttgatc agattattgt gtctttctgg
     1561 acacagtttc tccaggagaa ccattcagta acatattgtc cttactgtag tccttacagg
     1621 tttgagccta ctcaacgtat tctctaggag agtattctag aacctctgca cttcctgccc
     1681 agtgattcta ctcttgataa gatcagaaac tctccaggag agtgggttac atcatgtcct
     1741 tgtgggatgt tttcaattac agtctcatta taggactaac ttttctcaaa catttctgca
     1801 gaggggacct tgtaaaaagg tctttta
//
