LOCUS       NM_153527               1109 bp    mRNA    linear   ROD 14-JUN-2024
DEFINITION  Mus musculus DnaJ heat shock protein family (Hsp40) member B13
            (Dnajb13), transcript variant 1, mRNA.
ACCESSION   NM_153527
VERSION     NM_153527.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Zhang,X., Xiao,Z., Zhang,J., Xu,C., Liu,S., Cheng,L., Zhou,S.,
            Zhao,S., Zhang,Y., Wu,J., Wang,Y. and Liu,M.
  TITLE     Differential requirements of IQUB for the assembly of radial spoke
            1 and the motility of mouse cilia and flagella
  JOURNAL   Cell Rep 41 (8), 111683 (2022)
   PUBMED   36417862
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Shang,Y., Yan,J., Tang,W., Liu,C., Xiao,S., Guo,Y., Yuan,L.,
            Chen,L., Jiang,H., Guo,X., Qiao,J. and Li,W.
  TITLE     Mechanistic insights into acephalic spermatozoa syndrome-associated
            mutations in the human SUN5 gene
  JOURNAL   J Biol Chem 293 (7), 2395-2407 (2018)
   PUBMED   29298896
REFERENCE   3  (bases 1 to 1109)
  AUTHORS   Shang,Y., Zhu,F., Wang,L., Ouyang,Y.C., Dong,M.Z., Liu,C., Zhao,H.,
            Cui,X., Ma,D., Zhang,Z., Yang,X., Guo,Y., Liu,F., Yuan,L., Gao,F.,
            Guo,X., Sun,Q.Y., Cao,Y. and Li,W.
  TITLE     Essential role for SUN5 in anchoring sperm head to the tail
  JOURNAL   Elife 6, e28199 (2017)
   PUBMED   28945193
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1109)
  AUTHORS   Oji,A., Noda,T., Fujihara,Y., Miyata,H., Kim,Y.J., Muto,M.,
            Nozawa,K., Matsumura,T., Isotani,A. and Ikawa,M.
  TITLE     CRISPR/Cas9 mediated genome editing in ES cells and its application
            for chimeric analysis in mice
  JOURNAL   Sci Rep 6, 31666 (2016)
   PUBMED   27530713
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 1109)
  AUTHORS   Li,W. and Liu,G.
  TITLE     DNAJB13, a type II HSP40 family member, localizes to the spermatids
            and spermatozoa during mouse spermatogenesis
  JOURNAL   BMC Dev Biol 14, 38 (2014)
   PUBMED   25233908
  REMARK    GeneRIF: Results suggest that DNAJB13 participates in
            spermiogenesis and the motility of mature spermatozoa.
            Publication Status: Online-Only
REFERENCE   6  (bases 1 to 1109)
  AUTHORS   Guan,J., Kinoshita,M. and Yuan,L.
  TITLE     Spatiotemporal association of DNAJB13 with the annulus during mouse
            sperm flagellum development
  JOURNAL   BMC Dev Biol 9, 23 (2009)
   PUBMED   19298648
  REMARK    GeneRIF: The interaction of DNAJB13 with SEPT4 in vitro and its
            spatiotemporal association with the annulus during sperm flagellum
            development suggest that DNAJB13 may be involved in assembling the
            annulus structure.
            Publication Status: Online-Only
REFERENCE   7  (bases 1 to 1109)
  AUTHORS   Guan,J. and Yuan,L.
  TITLE     A heat-shock protein 40, DNAJB13, is an axoneme-associated
            component in mouse spermatozoa
  JOURNAL   Mol Reprod Dev 75 (9), 1379-1386 (2008)
   PUBMED   18247331
  REMARK    GeneRIF: DNAJB13 might be involved in assembly and stability of
            axoneme during sperm flagellum development.
REFERENCE   8  (bases 1 to 1109)
  AUTHORS   Liu,G., Lu,G.X., Fu,J.J., Liu,S.F. and Xing,X.W.
  TITLE     [Molecular cloning of mTSARG3 gene related to apoptosis in mouse
            spermatogenic cells]
  JOURNAL   Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai) 35 (12),
            1133-1139 (2003)
   PUBMED   14673507
REFERENCE   9  (bases 1 to 1109)
  AUTHORS   Chiellini,C., Costa,M., Novelli,S.E., Amri,E.Z., Benzi,L.,
            Bertacca,A., Cohen,P., Del Prato,S., Friedman,J.M. and Maffei,M.
  TITLE     Identification of cathepsin K as a novel marker of adiposity in
            white adipose tissue
  JOURNAL   J Cell Physiol 195 (2), 309-321 (2003)
   PUBMED   12652657
REFERENCE   10 (bases 1 to 1109)
  AUTHORS   Liu,G., Lu,G., Fu,J., Liu,S., Xing,X. and Li,L.
  TITLE     [Molecular cloning of TSARG3 gene related to apoptosis in human
            spermatogenic cells]
  JOURNAL   Zhonghua Yi Xue Yi Chuan Xue Za Zhi 20 (2), 107-110 (2003)
   PUBMED   12673577
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC117215.3.
            
            On Mar 24, 2023 this sequence version replaced NM_153527.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF419292.2, BC048501.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-87                AC117215.3         74725-74811
            88-191              AC117215.3         77651-77754
            192-353             AC117215.3         78648-78809
            354-511             AC117215.3         81971-82128
            512-625             AC117215.3         83309-83422
            626-739             AC117215.3         84884-84997
            740-816             AC117215.3         85512-85588
            817-1109            AC117215.3         86194-86486
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 54.36 cM"
     gene            1..1109
                     /gene="Dnajb13"
                     /gene_synonym="1700014P03Rik; Tsarg"
                     /note="DnaJ heat shock protein family (Hsp40) member B13"
                     /db_xref="GeneID:69387"
                     /db_xref="MGI:MGI:1916637"
     exon            1..87
                     /gene="Dnajb13"
                     /gene_synonym="1700014P03Rik; Tsarg"
                     /inference="alignment:Splign:2.1.0"
     exon            88..191
                     /gene="Dnajb13"
                     /gene_synonym="1700014P03Rik; Tsarg"
                     /inference="alignment:Splign:2.1.0"
     exon            192..353
                     /gene="Dnajb13"
                     /gene_synonym="1700014P03Rik; Tsarg"
                     /inference="alignment:Splign:2.1.0"
     exon            354..511
                     /gene="Dnajb13"
                     /gene_synonym="1700014P03Rik; Tsarg"
                     /inference="alignment:Splign:2.1.0"
     exon            512..625
                     /gene="Dnajb13"
                     /gene_synonym="1700014P03Rik; Tsarg"
                     /inference="alignment:Splign:2.1.0"
     exon            626..739
                     /gene="Dnajb13"
                     /gene_synonym="1700014P03Rik; Tsarg"
                     /inference="alignment:Splign:2.1.0"
     exon            740..816
                     /gene="Dnajb13"
                     /gene_synonym="1700014P03Rik; Tsarg"
                     /inference="alignment:Splign:2.1.0"
     exon            817..1109
                     /gene="Dnajb13"
                     /gene_synonym="1700014P03Rik; Tsarg"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1089..1094
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dnajb13"
                     /gene_synonym="1700014P03Rik; Tsarg"
                     /note="hexamer: AATAAA"
     polyA_site      1109
                     /gene="Dnajb13"
                     /gene_synonym="1700014P03Rik; Tsarg"
                     /note="major polyA site"
ORIGIN      
        1 agacccattg gtaccagcca tggggctgga ttactatgct gtgcttcagg tcacccgcaa
       61 ctcagaagat gcccagatca agaaggcata ccggaaactt gccctgaaga accacccatt
      121 gaagtcatct gagccgggtg caccagagat attcaagcaa atagcagaag cctacgacgt
      181 gctgagcgac cctgtgaagc gaggcatcta tgacaagttt ggtgaggaag gcctgaaggg
      241 tgggattccc ctagagtttg gatcccagac tccatggaca actggctacg tcttccatgg
      301 caaccctgac aaagtgttcc acgagttttt tgggggagac aaccccttca gcgaattttt
      361 tgatgcagaa ggaaatgata tagatttgaa ttttgggggg ctttggggca gaggcgtcca
      421 gaaacaagac cctcccattg aacgagacct ctatctgtcc cttgaggact tattctttgg
      481 ctgcaccaaa aaaattaaga tctcccgaag ggtactaaat gaagacagat attcttctac
      541 catcaaggac aagatcctga ccatcgatgt gagacctgga tggaggcagg gcacacgcat
      601 cacctttgag aaggaagggg accagggccc caacatcatc cctgctgaca ttatcttcat
      661 tgtgaaggag aagctgcacc ctcgcttccg cagggagcat gacaacctct tcttcgtgta
      721 ccccattcct ttgggcaagg cccttacctg ctgcactgtg gaggtgaaga ctcttgatga
      781 ccggctgctc aacatcccta tcaacgacat tgtccaccct aagtacttca agattgtgcc
      841 aggtgagggg atgccactgc ctgagaaccc cagcaagaag ggagacctct tcatcttctt
      901 tgacatccag ttccccaccc gcctcacacc ccagaagaag cagatgctgc gccaggcatt
      961 gctgacctaa ttctggggga cctgagcagg aacagggatg gagagggcta gctgggcctt
     1021 gcctgctcct atccactcaa ctcccacagc ctatgaagat ggggaggcgt gagaccttag
     1081 gctgacataa taaagattcc tatcctata
//
