LOCUS       NM_029062               1449 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus dynein axonemal assembly factor 6, retrotransposed
            (Dnaaf6rt), mRNA.
ACCESSION   NM_029062 XM_129741 XM_915270
VERSION     NM_029062.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1449)
  AUTHORS   Dong,F., Shinohara,K., Botilde,Y., Nabeshima,R., Asai,Y.,
            Fukumoto,A., Hasegawa,T., Matsuo,M., Takeda,H., Shiratori,H.,
            Nakamura,T. and Hamada,H.
  TITLE     Pih1d3 is required for cytoplasmic preassembly of axonemal dynein
            in mouse sperm
  JOURNAL   J Cell Biol 204 (2), 203-213 (2014)
   PUBMED   24421334
  REMARK    GeneRIF: Pih1d3 contributes to cytoplasmic preassembly of dynein
            complexes in spermatogenic cells by stabilizing and promoting
            complex formation by ODA and IDA proteins.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK015858.1.
            
            On Aug 30, 2006 this sequence version replaced NM_029062.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK015858.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-811               AK015858.1         2-812
            812-1449            AK015858.1         814-1451
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 11.56 cM"
     gene            1..1449
                     /gene="Dnaaf6rt"
                     /gene_synonym="4930521A18Rik; Dnaaf6; Pih1d3"
                     /note="dynein axonemal assembly factor 6, retrotransposed"
                     /db_xref="GeneID:74708"
                     /db_xref="MGI:MGI:1921958"
     exon            1..1449
                     /gene="Dnaaf6rt"
                     /gene_synonym="4930521A18Rik; Dnaaf6; Pih1d3"
                     /inference="alignment:Splign:2.1.0"
     CDS             101..757
                     /gene="Dnaaf6rt"
                     /gene_synonym="4930521A18Rik; Dnaaf6; Pih1d3"
                     /note="PIH1 domain-containing protein 3; dynein assembly
                     factor 6, axonemal; protein PIH1D3; PIH1 domain containing
                     3"
                     /codon_start=1
                     /product="dynein axonemal assembly factor 6"
                     /protein_id="NP_083338.1"
                     /db_xref="CCDS:CCDS35531.1"
                     /db_xref="GeneID:74708"
                     /db_xref="MGI:MGI:1921958"
                     /translation="MESENAEAENVVTGNLEAKSKEGKNMQFVTLSSAWSLQALSSLL
                     NPEEEDGFDFEQGQCSFTIGAMGPGNIGPPKAKESKAIPEPRSDESENIWNPEEVPEG
                     AEHDDIWDVREIPDYEIVFQQTVGTEDVYLGLTRKDPSTACCQELVVKIKLPNTNPSE
                     IQIDIQEMLLDLRTPRKKLLVNFPQPVERNSARASYIWEAETLEVRMTVQRDLDFNIS
                     "
     regulatory      898..903
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dnaaf6rt"
                     /gene_synonym="4930521A18Rik; Dnaaf6; Pih1d3"
                     /note="hexamer: AATATA"
     polyA_site      922
                     /gene="Dnaaf6rt"
                     /gene_synonym="4930521A18Rik; Dnaaf6; Pih1d3"
                     /note="major polyA site"
ORIGIN      
        1 gtgaacagca ctgaccaagc acctgggatc caattcagac cttcttccac atttagcaag
       61 cactctaccc ttgaggtaca ctcttatcta tatttgaata atggaatcag aaaatgctga
      121 agctgagaat gtggtaacag ggaatttgga agcaaagagc aaggaaggta aaaatatgca
      181 atttgtgaca ttgtcttctg cctggtccct tcaagcacta tccagtctcc tcaatcccga
      241 agaagaggat ggttttgatt ttgaacaggg gcaatgctca tttactattg gagccatggg
      301 ccctgggaat attggaccac ctaaagcaaa agagtccaaa gctattcctg aacccaggag
      361 tgatgaaagt gagaacatct ggaatccaga agaggttcca gaaggagcag agcatgatga
      421 tatatgggat gttcgtgaaa ttccagatta tgagattgta ttccaacaaa ctgtgggaac
      481 tgaggacgta tacctaggat taacaagaaa ggatccttca acggcatgct gccaggagct
      541 ggtggtgaaa attaaactgc ccaatacaaa cccttctgaa attcaaattg atatccaaga
      601 aatgctcctt gatcttcgca ctcctagaaa gaagctgtta gtaaactttc cccagcccgt
      661 ggaacggaac agtgctagag catcctatat ctgggaagct gaaacacttg aagtcaggat
      721 gaccgtccaa agggatttgg attttaatat ttcctgaaac tgtatgaata agaagagata
      781 gaaagaaatc atgacaagaa catttttttt tctacctttg aatactggtt gtttatgttc
      841 tccccccacc cccgacatat tttagaaagg ttcagaattt tagtggtgtt ttgatcaaat
      901 atagtcaatt ctattactgt tatgacatat ggttgtttca tacaataagg tgctgttcca
      961 tttctatagt gagagctgaa taaaatattt tcaggttaac catctaggtt attacatggt
     1021 caatcacaca gcagagctat gaccatgaaa taagtgattc acttaaatca gcagtctgaa
     1081 gaacttcagc taactaatta cattaccata caatctgcta catagggatt tgtcattatt
     1141 gtcaccagaa aaattcattt ggttgctttt tcattgattt taacatgatt taggatgttt
     1201 tcaatctagg gcttcaatat tgttctggaa catataagta agaaaggact ataaataatt
     1261 tgctgtgtcc tgtgagacac atgtttattt gaaaaagtaa tatttataga tatatgtgta
     1321 gattcatttt ctcttgtttc tatcttccta actgtacatt attattttta taaattttcc
     1381 gtgttccttg tattttctgt actattgaat gagtttattt cattactatt tattaaaaac
     1441 gtatatttt
//
