LOCUS       NM_177921               1509 bp    mRNA    linear   ROD 08-FEB-2024
DEFINITION  Mus musculus dynein axonemal assembly factor 6 (Dnaaf6), mRNA.
ACCESSION   NM_177921
VERSION     NM_177921.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Dong,F., Shinohara,K., Botilde,Y., Nabeshima,R., Asai,Y.,
            Fukumoto,A., Hasegawa,T., Matsuo,M., Takeda,H., Shiratori,H.,
            Nakamura,T. and Hamada,H.
  TITLE     Pih1d3 is required for cytoplasmic preassembly of axonemal dynein
            in mouse sperm
  JOURNAL   J Cell Biol 204 (2), 203-213 (2014)
   PUBMED   24421334
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK054107.1.
            
            On Apr 6, 2007 this sequence version replaced NM_177921.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK054107.1, BC119078.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1509              AK054107.1         2-1510
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 61.35 cM"
     gene            1..1509
                     /gene="Dnaaf6"
                     /gene_synonym="Dnaaf6b; E230019M04Rik; Pih1d3; Pih1h3b"
                     /note="dynein axonemal assembly factor 6"
                     /db_xref="GeneID:331537"
                     /db_xref="MGI:MGI:3607720"
     exon            1..82
                     /gene="Dnaaf6"
                     /gene_synonym="Dnaaf6b; E230019M04Rik; Pih1d3; Pih1h3b"
                     /inference="alignment:Splign:2.1.0"
     exon            83..253
                     /gene="Dnaaf6"
                     /gene_synonym="Dnaaf6b; E230019M04Rik; Pih1d3; Pih1h3b"
                     /inference="alignment:Splign:2.1.0"
     CDS             86..742
                     /gene="Dnaaf6"
                     /gene_synonym="Dnaaf6b; E230019M04Rik; Pih1d3; Pih1h3b"
                     /note="PIH1 domain containing 3B; dynein axonemal assembly
                     factor 6B"
                     /codon_start=1
                     /product="dynein axonemal assembly factor 6"
                     /protein_id="NP_808589.1"
                     /db_xref="CCDS:CCDS30438.1"
                     /db_xref="GeneID:331537"
                     /db_xref="MGI:MGI:3607720"
                     /translation="MESEIAEAEKVKTGNLEAKSMEAKNMQFEMLSSASTLQALASLL
                     NPEEEDDFDFEQGQCTSTIRAMGPGNIGPPKAKESKAIPEPRSDESENIWNPEEVPEG
                     GEHDDIWDVREIPDYEIVFQQTVGTEDIYLGLTGKDPSTACCQELVVKIKLPNTNPSE
                     IQIDIQEMLLDLRTPKKKLLVNFPQPVERNSARASYIWEAETLEVRMTLQRDLDFNIS
                     "
     exon            254..326
                     /gene="Dnaaf6"
                     /gene_synonym="Dnaaf6b; E230019M04Rik; Pih1d3; Pih1h3b"
                     /inference="alignment:Splign:2.1.0"
     exon            327..432
                     /gene="Dnaaf6"
                     /gene_synonym="Dnaaf6b; E230019M04Rik; Pih1d3; Pih1h3b"
                     /inference="alignment:Splign:2.1.0"
     exon            433..529
                     /gene="Dnaaf6"
                     /gene_synonym="Dnaaf6b; E230019M04Rik; Pih1d3; Pih1h3b"
                     /inference="alignment:Splign:2.1.0"
     exon            530..615
                     /gene="Dnaaf6"
                     /gene_synonym="Dnaaf6b; E230019M04Rik; Pih1d3; Pih1h3b"
                     /inference="alignment:Splign:2.1.0"
     exon            616..1509
                     /gene="Dnaaf6"
                     /gene_synonym="Dnaaf6b; E230019M04Rik; Pih1d3; Pih1h3b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggcaacaga gagacgcaca gcgagggagc agcagtctat tttcgtcccc taggctgtga
       61 gctgtgcgga gcaccgacca agaatatgga atcggaaatt gcagaagctg agaaggtcaa
      121 aacagggaat ttggaagcaa aaagcatgga agctaaaaat atgcaatttg agatgctgtc
      181 ttctgcctca accctgcaag cactggccag tctcctgaat cctgaagaag aggatgattt
      241 tgattttgaa cagggacaat gtacatctac tattagagct atgggccctg ggaatattgg
      301 accgcctaaa gcaaaagagt ccaaagccat tcctgaaccc aggagtgatg aaagtgaaaa
      361 catctggaat ccagaagagg ttccagaagg aggagagcat gatgatatat gggatgttcg
      421 agaaatccca gattatgaga ttgtattcca acaaactgtg ggaactgagg acatatacct
      481 aggattgaca ggaaaggatc cttcaacagc atgctgccag gagctggtgg tgaaaattaa
      541 actgcccaat acgaaccctt ctgaaattca aattgacatc caggaaatgc tccttgatct
      601 tcgcactcct aaaaagaagc tgttagtaaa ctttccccag cctgtggaac ggaacagtgc
      661 tagagcatcc tatatctggg aagctgaaac acttgaagtc aggatgaccc tccaaaggga
      721 tttggatttt aatatttcct gaaactgcac gaataagaaa agatagaaaa aactcataac
      781 aatgggaata tttttgtttt tacctttgag tactggttgt ttatggtctc ttttttgccc
      841 cctgacttat tttagaaagg ttctgatttt tagtggtgtt ttgatcatat atagtcaaat
      901 ctattactgt taggaatatg gttgtttcat acaagacagt gctgttccat ttttattgtg
      961 agaactgaat aaaatatttt caggttaatc atctagatta ctacatggtc aattgcacag
     1021 cagagctatg atcataaaat aagtgattca cttaaatcag cagtctgaag gtcttaagct
     1081 aattaattac actaccatac aatctgctac ataaggattt gtcattatta tcaccagaaa
     1141 aattcatttg gttgcttttc cattgatttt atcaagtgat ttaggatgtt ttctatctag
     1201 gtccttaata ttgttctgga tcatacaagt aagaaaggac tataacgttt tgctgtgtcc
     1261 tgtgggactc atgtttactt gaaaaagtaa tatttataga tatatttgta gattcatttt
     1321 tctctcattt ttatcttcct aattggacat tcttattttc ataaattatc ccaatgttcc
     1381 ttgcattttc tgtactattg aatgagttta ttttattatt gtttatgaaa aagttatgtt
     1441 ttatcattgt tgtaatttga tatcattgta taactgtgaa attgactggg agtaaatttt
     1501 gacaaagtg
//
