LOCUS       NM_001359628            1263 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus DMRT-like family C1c1 (Dmrtc1c1), transcript variant
            2, mRNA.
ACCESSION   NM_001359628
VERSION     NM_001359628.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Shalom-Barak T, Zhang X, Chu T, Timothy Schaiff W, Reddy JK, Xu J,
            Sadovsky Y and Barak Y.
  TITLE     Placental PPARgamma regulates spatiotemporally diverse genes and a
            unique metabolic network
  JOURNAL   Dev Biol 372 (1), 143-155 (2012)
   PUBMED   22967998
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Chen H, Palmer JS, Thiagarajan RD, Dinger ME, Lesieur E, Chiu H,
            Schulz A, Spiller C, Grimmond SM, Little MH, Koopman P and Wilhelm
            D.
  TITLE     Identification of novel markers of mouse fetal ovary development
  JOURNAL   PLoS One 7 (7), e41683 (2012)
   PUBMED   22844512
REFERENCE   3  (bases 1 to 1263)
  AUTHORS   Gallardo TD, John GB, Shirley L, Contreras CM, Akbay EA, Haynie JM,
            Ward SE, Shidler MJ and Castrillon DH.
  TITLE     Genomewide discovery and classification of candidate ovarian
            fertility genes in the mouse
  JOURNAL   Genetics 177 (1), 179-194 (2007)
   PUBMED   17660561
  REMARK    GeneRIF: Transcripts highly enriched in ovary; gene identified as
            candidate female fertility factor.
REFERENCE   4  (bases 1 to 1263)
  AUTHORS   Veith AM, Klattig J, Dettai A, Schmidt C, Englert C and Volff JN.
  TITLE     Male-biased expression of X-chromosomal DM domain-less Dmrt8 genes
            in the mouse
  JOURNAL   Genomics 88 (2), 185-195 (2006)
   PUBMED   16488114
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL773565.17.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN01164134
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-26                AL773565.17        26243-26268
            27-200              AL773565.17        26720-26893
            201-352             AL773565.17        27037-27188
            353-411             AL773565.17        27511-27569
            412-548             AL773565.17        27891-28027
            549-612             AL773565.17        28904-28967
            613-742             AL773565.17        29155-29284
            743-1263            AL773565.17        31450-31970
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 45.73 cM"
     gene            1..1263
                     /gene="Dmrtc1c1"
                     /gene_synonym="4933424F23Rik; Dmrt8.3; Dmrtc1c"
                     /note="DMRT-like family C1c1"
                     /db_xref="GeneID:71083"
                     /db_xref="MGI:MGI:1918333"
     exon            1..26
                     /gene="Dmrtc1c1"
                     /gene_synonym="4933424F23Rik; Dmrt8.3; Dmrtc1c"
                     /inference="alignment:Splign:2.1.0"
     exon            27..200
                     /gene="Dmrtc1c1"
                     /gene_synonym="4933424F23Rik; Dmrt8.3; Dmrtc1c"
                     /inference="alignment:Splign:2.1.0"
     CDS             37..738
                     /gene="Dmrtc1c1"
                     /gene_synonym="4933424F23Rik; Dmrt8.3; Dmrtc1c"
                     /note="isoform 2 is encoded by transcript variant 2;
                     DMRT-like family C1c"
                     /codon_start=1
                     /product="DMRT-like family C1c isoform 2"
                     /protein_id="NP_001346557.1"
                     /db_xref="GeneID:71083"
                     /db_xref="MGI:MGI:1918333"
                     /translation="MGPKDKAAVSCRPSTSECNMGNKTGAAAPVMEPILRGRANHPGR
                     GHSCGTRTQVRDHGEALLAVGSEQKGYSARGKRRQIRLPRTTLPRKPFDQAKKTPTKG
                     RGRPAKENPVSQPEDLPQASPQEESPHGSQVYCWPPALSPLPYMSVPPEQQLVAPPST
                     EIHGAFAESNPCSSMVLLPRTSTDHHHPLESQGSGASDQASVPASLECQEILEAAEAL
                     MTLKNSSWTWHQTHS"
     exon            201..352
                     /gene="Dmrtc1c1"
                     /gene_synonym="4933424F23Rik; Dmrt8.3; Dmrtc1c"
                     /inference="alignment:Splign:2.1.0"
     exon            353..411
                     /gene="Dmrtc1c1"
                     /gene_synonym="4933424F23Rik; Dmrt8.3; Dmrtc1c"
                     /inference="alignment:Splign:2.1.0"
     exon            412..548
                     /gene="Dmrtc1c1"
                     /gene_synonym="4933424F23Rik; Dmrt8.3; Dmrtc1c"
                     /inference="alignment:Splign:2.1.0"
     exon            549..612
                     /gene="Dmrtc1c1"
                     /gene_synonym="4933424F23Rik; Dmrt8.3; Dmrtc1c"
                     /inference="alignment:Splign:2.1.0"
     exon            613..742
                     /gene="Dmrtc1c1"
                     /gene_synonym="4933424F23Rik; Dmrt8.3; Dmrtc1c"
                     /inference="alignment:Splign:2.1.0"
     exon            743..1263
                     /gene="Dmrtc1c1"
                     /gene_synonym="4933424F23Rik; Dmrt8.3; Dmrtc1c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagtgagtc tgagcagatc gattggccta agaaccatgg gaccaaaaga caaagcagct
       61 gtttcctgcc ggccctccac ctcggaatgt aacatgggga acaagactgg agcagcagca
      121 cctgtaatgg aacctatcct cagaggacgt gcaaatcacc ctggcagagg ccacagttgt
      181 ggcacccgga cccaagtcag ggaccacggc gaggccctgc tggctgtggg ttctgagcaa
      241 aaggggtata gtgcacgagg aaagagacgc cagattcgac taccaagaac gactctcccc
      301 cgcaaaccct tcgatcaggc caagaagacc cctaccaaag gaagaggtcg ccctgcaaag
      361 gagaaccctg tgtcccagcc tgaagacctg cctcaagcaa gcccccagga ggagagcccc
      421 cacgggtctc aagtgtattg ctggccccca gcactttcac ctctgcctta catgtcagtg
      481 cccccagagc agcagttggt ggctcctcct tccacggaga ttcacggggc ttttgctgag
      541 tccaacccat gctcaagtat ggtcctcctg ccacgtacct ccaccgatca ccaccatcca
      601 ctggagtcac agggctccgg tgcctctgac caggcctcgg ttcctgcctc cttagagtgt
      661 caggaaatac tggaggctgc tgaggccctg atgactctga agaactcttc ttggacctgg
      721 caccagaccc acagctaaac aggtcttgct tgaagttgga gcagtgaagc ctccccgccc
      781 atccgtgtga ttcagatcca ctggccagct ccacttcact tcctgttgag tgcaccttct
      841 tcttggactt aagggcccag aggtgggggg tgcggacttc ttcaagcact gagttgatgt
      901 tatgtgtggt tcctgtctga aatgcttaaa tgtgctttgt aagccttcgg gcatttaata
      961 agctttcaga ctcttctcat aatgtagatc tgttccttag cttgcatagt atgttcttgt
     1021 acccccatcc cttattcctt tggaagctga tgctattcaa tgtatcttct gtggatagca
     1081 ctgtgcaatt taatgtgacc agtctgtcgg tggggctctg agtgggttag tataccattg
     1141 tttgcatttg ttctgtgatt gcatatgtgc ccaggcaccc ctgtacttgt atgtggagaa
     1201 gtttcaactt gtgtctaggc ttgtatattt gaacaaataa taaagcattg gtaggagaca
     1261 ctg
//
