LOCUS       NM_001039116            1184 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus DMRT-like family C1b (Dmrtc1b), transcript variant 2,
            mRNA.
ACCESSION   NM_001039116 XM_920130
VERSION     NM_001039116.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Veith AM, Klattig J, Dettai A, Schmidt C, Englert C and Volff JN.
  TITLE     Male-biased expression of X-chromosomal DM domain-less Dmrt8 genes
            in the mouse
  JOURNAL   Genomics 88 (2), 185-195 (2006)
   PUBMED   16488114
  REMARK    GeneRIF: In embryos, Dmrt8.2 shows a dynamic expression restricted
            to male and female gonads and might be involved in sexual
            development
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC150829.1 and DQ316776.1.
            
            On Nov 21, 2009 this sequence version replaced NM_001039116.1.
            
            Transcript Variant: This variant (2) differs in the 5' UTR, lacks a
            portion of the 5' coding region, and initiates translation at an
            alternate start codon, compared to variant 1. The encoded isoform
            (2) has a distinct N-terminus and is shorter than isoform 1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DQ316775.1, BC150829.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-970               BC150829.1         1-970
            971-1184            DQ316776.1         1108-1321
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 45.66 cM"
     gene            1..1184
                     /gene="Dmrtc1b"
                     /gene_synonym="Dmrt8.2; Gm714"
                     /note="DMRT-like family C1b"
                     /db_xref="GeneID:632708"
                     /db_xref="MGI:MGI:3639121"
     exon            1..46
                     /gene="Dmrtc1b"
                     /gene_synonym="Dmrt8.2; Gm714"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..749
                     /gene="Dmrtc1b"
                     /gene_synonym="Dmrt8.2; Gm714"
                     /note="isoform 2 is encoded by transcript variant 2;
                     doublesex and mab-3 related transcription factor 8.2"
                     /codon_start=1
                     /product="DMRT-like family C1b isoform 2"
                     /protein_id="NP_001034205.2"
                     /db_xref="CCDS:CCDS30325.1"
                     /db_xref="GeneID:632708"
                     /db_xref="MGI:MGI:3639121"
                     /translation="MQRSSGSWEQHGLLPAVSAPKKEQGTRLKRPLDQGVIKNMACTP
                     KFHKHGKRLAVEAEKPNWKESTMHKHETRPPKTPREGSSQGTLMRSKPQEPSVLPYAP
                     VTQQQQSVISYSAKNLGPIARPKRYSSVIVKNHAVTDPLLLQPQVPNATKHDSVAAAV
                     EWQRKLEAAEALLALRNSPLPPPVSASPKRHGKMTNSYLPGHGTQGSAGKRGQQPPSR
                     YVPPRSANSASLTGSLDCMSFFT"
     exon            47..204
                     /gene="Dmrtc1b"
                     /gene_synonym="Dmrt8.2; Gm714"
                     /inference="alignment:Splign:2.1.0"
     exon            205..263
                     /gene="Dmrtc1b"
                     /gene_synonym="Dmrt8.2; Gm714"
                     /inference="alignment:Splign:2.1.0"
     exon            264..400
                     /gene="Dmrtc1b"
                     /gene_synonym="Dmrt8.2; Gm714"
                     /inference="alignment:Splign:2.1.0"
     exon            401..461
                     /gene="Dmrtc1b"
                     /gene_synonym="Dmrt8.2; Gm714"
                     /inference="alignment:Splign:2.1.0"
     exon            462..639
                     /gene="Dmrtc1b"
                     /gene_synonym="Dmrt8.2; Gm714"
                     /inference="alignment:Splign:2.1.0"
     exon            640..1184
                     /gene="Dmrtc1b"
                     /gene_synonym="Dmrt8.2; Gm714"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaggtcccct ggctgaactg aaaatgcagc ggtcttcggg ttcctgggaa cagcatgggc
       61 tcttgcctgc agtgagtgcc ccaaaaaagg agcagggcac aaggctgaag aggcccctgg
      121 atcaaggagt gataaagaat atggcctgta ctcctaaatt tcacaagcat ggcaagaggt
      181 tggctgttga agcagaaaaa cccaattgga aagagagcac tatgcacaag catgagacca
      241 ggccccccaa aaccccacgg gagggaagtt cccaaggcac tctgatgcgc agcaagccac
      301 aagaaccttc cgttctgcct tatgctccag tgacccagca gcagcaatct gtgatttctt
      361 attcagcaaa gaacctcggt cccattgcca ggcccaaaag atactcaagt gtgatcgtga
      421 aaaaccatgc agtcactgat cctcttctac tgcagccaca ggtccctaat gccaccaagc
      481 acgattctgt tgctgctgcc gtagagtggc agaggaagct ggaggctgct gaggctctgt
      541 tggctctgag aaactctcct ctgcctcctc ctgtttctgc ctctccaaaa aggcatggca
      601 aaatgaccaa tagctatctt cctggacatg gaacacaagg ttctgctgga aagagagggc
      661 agcagcctcc tagccgctat gtgccaccac ggtctgccaa ctctgcctca ctgactggaa
      721 gtctggactg catgtccttc ttcacctaag agaccagagt gggaggtctc actacagcac
      781 tgcctgtttg gtatcctgtt tcatgtctaa agtgaaaagt gtttttaaaa attttttaac
      841 ttttgggatg agttctcatg tagccagcct ggccttggtt tcagtataca gccaatcatg
      901 actttgaact cctgattttc tccacttcta aagtcctggg attataggac tgtgctacca
      961 tgcctggctt tttttttttt aattagtttt aagttttcag gagttttgta agctttcaaa
     1021 cccttttcat ggtgtagggc atttacttga ttgaggtttg atgttaacct ctatttagta
     1081 ctcttctgga ataatttctt gctatccctc ttagtaaaaa aatcagtatt gtaggaccta
     1141 atgtgatcaa tcagtgggat tccgagtggg tttgtatgcc agca
//
