LOCUS       NM_175647               4073 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus doublesex and mab-3 related transcription factor like
            family A1 (Dmrta1), mRNA.
ACCESSION   NM_175647
VERSION     NM_175647.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4073)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4073)
  AUTHORS   Ono,K., Hata,K., Nakamura,E., Ishihara,S., Kobayashi,S.,
            Nakanishi,M., Yoshida,M., Takahata,Y., Murakami,T., Takenoshita,S.,
            Komori,T., Nishimura,R. and Yoneda,T.
  TITLE     Dmrt2 promotes transition of endochondral bone formation by linking
            Sox9 and Runx2
  JOURNAL   Commun Biol 4 (1), 326 (2021)
   PUBMED   33707608
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4073)
  AUTHORS   Kikkawa,T., Sakayori,N., Yuuki,H., Katsuyama,Y., Matsuzaki,F.,
            Konno,D., Abe,T., Kiyonari,H. and Osumi,N.
  TITLE     Dmrt genes participate in the development of Cajal-Retzius cells
            derived from the cortical hem in the telencephalon
  JOURNAL   Dev Dyn 249 (6), 698-710 (2020)
   PUBMED   32012381
REFERENCE   4  (bases 1 to 4073)
  AUTHORS   Konno,D., Kishida,C., Maehara,K., Ohkawa,Y., Kiyonari,H., Okada,S.
            and Matsuzaki,F.
  TITLE     Dmrt factors determine the positional information of cerebral
            cortical progenitors via differential suppression of homeobox genes
  JOURNAL   Development 146 (15) (2019)
   PUBMED   31371378
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 4073)
  AUTHORS   Golonzhka,O., Nord,A., Tang,P.L.F., Lindtner,S., Ypsilanti,A.R.,
            Ferretti,E., Visel,A., Selleri,L. and Rubenstein,J.L.R.
  TITLE     Pbx Regulates Patterning of the Cerebral Cortex in Progenitors and
            Postmitotic Neurons
  JOURNAL   Neuron 88 (6), 1192-1207 (2015)
   PUBMED   26671461
REFERENCE   6  (bases 1 to 4073)
  AUTHORS   Hong,C.S., Park,B.Y. and Saint-Jeannet,J.P.
  TITLE     The function of Dmrt genes in vertebrate development: it is not
            just about sex
  JOURNAL   Dev Biol 310 (1), 1-9 (2007)
   PUBMED   17720152
  REMARK    Review article
REFERENCE   7  (bases 1 to 4073)
  AUTHORS   Murphy,M.W., Zarkower,D. and Bardwell,V.J.
  TITLE     Vertebrate DM domain proteins bind similar DNA sequences and can
            heterodimerize on DNA
  JOURNAL   BMC Mol Biol 8, 58 (2007)
   PUBMED   17605809
  REMARK    Publication Status: Online-Only
REFERENCE   8  (bases 1 to 4073)
  AUTHORS   Balciuniene,J., Bardwell,V.J. and Zarkower,D.
  TITLE     Mice mutant in the DM domain gene Dmrt4 are viable and fertile but
            have polyovular follicles
  JOURNAL   Mol Cell Biol 26 (23), 8984-8991 (2006)
   PUBMED   16982677
REFERENCE   9  (bases 1 to 4073)
  AUTHORS   Choi,M.Y., Romer,A.I., Hu,M., Lepourcelet,M., Mechoor,A.,
            Yesilaltay,A., Krieger,M., Gray,P.A. and Shivdasani,R.A.
  TITLE     A dynamic expression survey identifies transcription factors
            relevant in mouse digestive tract development
  JOURNAL   Development 133 (20), 4119-4129 (2006)
   PUBMED   16971476
REFERENCE   10 (bases 1 to 4073)
  AUTHORS   Kim,S., Kettlewell,J.R., Anderson,R.C., Bardwell,V.J. and
            Zarkower,D.
  TITLE     Sexually dimorphic expression of multiple doublesex-related genes
            in the embryonic mouse gonad
  JOURNAL   Gene Expr Patterns 3 (1), 77-82 (2003)
   PUBMED   12609607
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AL772403.11.
            
            On Nov 17, 2006 this sequence version replaced NM_175647.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF542047.1, BC137613.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-742               AL772403.11        60432-61173
            743-4073            AL772403.11        63670-67000
FEATURES             Location/Qualifiers
     source          1..4073
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 42.15 cM"
     gene            1..4073
                     /gene="Dmrta1"
                     /gene_synonym="Dmrt4"
                     /note="doublesex and mab-3 related transcription factor
                     like family A1"
                     /db_xref="GeneID:242523"
                     /db_xref="MGI:MGI:2653627"
     exon            1..742
                     /gene="Dmrta1"
                     /gene_synonym="Dmrt4"
                     /inference="alignment:Splign:2.1.0"
     exon            743..4073
                     /gene="Dmrta1"
                     /gene_synonym="Dmrt4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgcgcggag cgggacagcg ggacctaggc gggtcctcag ccggtatccc cacagggtag
       61 ctctggacag cgcacttgct ggtttctact cctcagaggc gccttctcag aatggagcga
      121 ttacctcacg gtcgtagaga ccgcagcggc ggctgccgac cccatctggc cccagggcgg
      181 gctgctgcgc ccgcttcggc cgcgcggtcg gtgtcgtcgg ggattccggt gtccgcgact
      241 ttcctgcggc cgcctggcct ttttctgcga tcgaccgcaa gctccggtcg cgcaggatgc
      301 gctccgggcc ctgggctgga tagggcgttg ggggcggtag gctgcggcta cccgcggacc
      361 ccgaagtgcg cgcgctgtcg caaccatggc gtggtgtcag cgctcaaggg ccacaagcgc
      421 ttctgccgct ggcgggactg cgcgtgtgcc aagtgcaccc tgatcgccga gcggcagcgt
      481 gtcatggccg cgcaggtggc cctgcgcagg cagcaggcgc aggaggagag cgaggcccgc
      541 gggctgcaca ggcttctgta ccaggggtcg tcggggtccg gggctcaggc ttccgggggc
      601 agcggcagga ccgagagtcc ccaggtcttg aataacccca tggctgtagc tgttctggga
      661 gcgggtgcct ctagacaccc tgggagccgg tcagtcccaa ctttcgaggt tttccagcaa
      721 gattatgctg acagaaagca ggaaccaaaa cagagaaact gtgagtcatg ccagagtaga
      781 caggaagaac cagtctccaa cactcatcac cattctctgg gatcatctaa gggtaatgtg
      841 accgtggaga aacagggctt catgtcatct attccagaac acccagacaa atccaccatc
      901 atcctgtctc cttgccccac ggatcaatcg ggaggagaag acagtcccag gtctttctct
      961 tcctctgacc tggaatcagg gaatgaaagc gagtgggcca gagactacat tgctaccaga
     1021 gccagccttt ccacggtgac ctcaagacca cgagaccctc tcggaattct taccaggatc
     1081 tttccaggtt acaagcatag ccgcctagaa ggcattctac agttctgcaa gggagatgta
     1141 gtccaagcta ttgaacagat cttaaatggg agagaacata aacccgactg cagggaccta
     1201 gcacgcgcag acttggaaaa tgcagccttt cagagagcgt cagattttag tcttgctggc
     1261 attggctttg ggactctaag taataaatca gctctctctc ctcttgaagc tgcgtctgct
     1321 gcttatggag gagattcaac tctctacagt ttcaatccta gactagcttt cagcccactg
     1381 cgcctggcat attcttctcc aggaagagcg ctgtctggtt ttgtgtcacc ctacctaaca
     1441 cctggactgg ttccagcatt gccttttcgg ccaactttgg attatgcgtt tccagggatg
     1501 attagggagc cgtcccacct ccctagcaag cacttagtag ctggtggtag actgtatttc
     1561 aggcccaatc aggagcatct gtaacatatc cactctacca ttctgcagtg tttctagagc
     1621 catgcaacac acacacacac acacacacac acacacacac acacacacac acacactttt
     1681 taatgtactt caaagagcat aagcttggcc tctcagcctt aaatgctatt tttctaagca
     1741 gtgtaatata ctttagattt gaagactttt ctttagtgtt cattaaatca aagaaacatt
     1801 taatcattat atgtgccttg aataaactta tttcaggaaa ctttattatt ttaaactaat
     1861 gaattttctc cttaaattat cacttttatt ataaagccat acatgctttt attttattgt
     1921 agagttcagt ttatagtgaa catttgtaaa aatcaattca tatggtagaa aagggaccag
     1981 gagttgggga gtgtggttat tattctaaag cagctccctc tccatctcta ccttctccct
     2041 tcccactttt cctcctctac cacacctgag ccagaaattg ttccaagtat ttaaaaatat
     2101 tttatttgca gataaatgac cagtaatagt aagcaaacct aataaatttg aatctattac
     2161 ttttggaatg tccgattttt gtattcttta gctactaatt gtaaaaagga aatggttttt
     2221 gaactgttct ctttaaagct aacattgtaa atgcacaaag aactattggg tcataagaaa
     2281 caagaccctg ccctcttctg gccactatca caaactgcaa ttcagttatt ctcagaaaac
     2341 atggttttgt aactgttaca gactaacaag tttatgggga aaaaaaccct tttggatcat
     2401 gctgtattca ttttaatgtt gtgaaatata tttctactaa ggataatttt aatttttgag
     2461 tagcttatac ttctatctgg agatatagtc ttttatcatt tgtttgagat aatgacatgt
     2521 cacccattct caaaggtaaa aaggaattat tcaaaaacta aactatctgc tcagacaaat
     2581 atctactgat tatatgtaaa gtatatgtaa tgtatttagg cgatacatac ctgcctttaa
     2641 agcttagaga tgtttttgga gtcttaaggc atacatttct ttccccaact ggagtattta
     2701 aaatcatcca tccagctgtt caattcagtc actgggaagc cccagggggg aaaaacagct
     2761 cacaaagcaa cggtacaatg ttctcctcat gtgccttaat ttttaaacgg acaatggctt
     2821 cactgtattg tgaagaataa tgaagatcca gatgtggtag gagttagaaa tatctttatc
     2881 tgagaagcaa gaatcactag gaaaatttta aaattatagc tatgtatgtg tgtcttttct
     2941 attaagctaa tacgttttca cagtatacct gacctaaaaa tatcataatg cgcaactgga
     3001 gagtatctgg tgctgatgta gaatgcaaag tgcttaatga tttgcataaa ttttaatgga
     3061 gcaaggttga ggaaaagtcc tgtaaaattt agattgatgc aatgctcact ttttcttttt
     3121 ctttttgtac aaaacaaaat ggagaaaccc ttcaggctca gagcctaaat tactgtacaa
     3181 cgcctggtaa ctgactgcta tgcagcagac atacattgag attaggctga ttttgggtga
     3241 tggaactttc aaccaaatga ttctacaaag tggcccatta atacatagtt ttgaatagag
     3301 ttccatgagg ttctatgtct cctaaaaagt attcagatca gaactcttgg tgatccttga
     3361 gttgtttttt attttatgaa tctatctatt acattctatt tttgagatac actagatgct
     3421 gtgtagggtg tcagatgcag agtgtgatgt aaagagagct atagtaaatg gcagaaatct
     3481 ggattaaaag tacagcaatt ctagcattgt tggattcttc acaaggttaa cataataatg
     3541 tggacctatt gactgtgtgg tgatggcaca cacctttaat cccagcactc aagaggcaga
     3601 ggcaaaggag tgaaaggcca atctgctcta taaaatgagc ttcagaacaa tcatggctat
     3661 acgaagaaac cctgtcttaa aaacaaaaca aaacaaaaca aataaaaaca aaccccaaaa
     3721 tatgtggata cattatttta ataatctaaa tattaagtta atttttatga tgcgttatgt
     3781 agtctatata attcacaaga ctcttaatac ctaaaaaaac ttgatgaaat aggagattct
     3841 tccaactact agctagacat cgaggaaact gaggctgaga tgtgtatagc cagttccaag
     3901 ggtaataata gtatgtgtta ccaggaaggg ttccttactc tagtaacttc agactgttag
     3961 gtatgagaaa ggattatgcc tgcttgtttc tttacagctt tgtatggtgt ctgatacata
     4021 atatgtggcc gatagtacct cattatttac taaattaata aaagcattag att
//
