LOCUS       XM_006518835            2629 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus DLG associated protein 5 (Dlgap5),
            transcript variant X3, mRNA.
ACCESSION   XM_006518835
VERSION     XM_006518835.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000080.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Oct 7, 2023 this sequence was replaced by
            NM_001424784.1.
            
            On Sep 21, 2020 this sequence version replaced XM_006518835.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2629
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="14"
     gene            1..2629
                     /gene="Dlgap5"
                     /gene_synonym="Dap-5; Dlg7; Hurp; mKIAA0008"
                     /note="DLG associated protein 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 57 ESTs, 264 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 17 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:218977"
                     /db_xref="MGI:MGI:2183453"
     CDS             124..2586
                     /gene="Dlgap5"
                     /gene_synonym="Dap-5; Dlg7; Hurp; mKIAA0008"
                     /codon_start=1
                     /product="disks large-associated protein 5 isoform X3"
                     /protein_id="XP_006518898.1"
                     /db_xref="GeneID:218977"
                     /db_xref="MGI:MGI:2183453"
                     /translation="MLVSRFASRFRKDSSTEMVRTNLAHRKSLSQKENRHRVYERNRH
                     FGLKDVNIPLEGRELGNIHETSQDLSPEKASSKTRSVKMVLSDQRKQLLQKYKEEKQL
                     QKLKEQREKAKRGVFKVGLYRPAAPGFLVTDQRGAKAEPEKAFPHTGRITRSKTKEYM
                     EQTKIGSRNVPKATQSDQRQTSEKQPLDRERKVMQPVLFTSGKGTESAATQRAKLMAR
                     TVSSTTRKPVTRATNEKGSERMRPSGGRPAKKPEGKPDKVIPSKVERDEKHLDSQTRE
                     TSEMGPLGVFREVESLPATAPAQGKERKSFAPKHCVFQPPCGLKSYQVAPLSPRSANA
                     FLTPNCDWNQLRPEVFSTTTQDKANEILVQQGLESLTDRSKEHVLNQKGASTSDSNHA
                     SVKGVPCSEASEGQTSQPPHDVPYFRKILQSETDRLTSHCQEWEGKLDLDIPDEAKGL
                     IRTTVGQTRLLIKERFRQFEGLVDNCEYKRGEKETTCTDLDGFWDMVSFQVDDVNQKF
                     NNLIKLEASGWKDSNNPSKKVLRKKIVPGRTSKAKQDDDGRAAARSRLAAIKNAMKGR
                     PQQEVQAHAAAPENTKEVDKIVFDAGFFRIESPVKSFSVLSSERRSQRFGTPLSASKV
                     VPEGRAAGDLLRQKMPLKKPDPQSSKSEHVDRTFSDGLESRCHVEDTPCPGEQDSSDI
                     EHDVNKINVKMDCFSVETNLPLPAGDANTNQKEAISAVEGASSAVTSQDLLMSNPETN
                     TSSQSNTSQEEAEASQSVLLHKSLTSECHLLEPASAAPAPALGRRPDSQIAADSSPLE
                     VTSFSSHHYDPEGNTRRALNLT"
ORIGIN      
        1 tccaatcagc ggctggcagc gggaaatttc agttccgtga agggtcggtc cgggagttcc
       61 ttctgcggat cggtggagtt ttctgtgttg cgacattgtt gtggatccag aaactgcttc
      121 aggatgctgg tgtcacgttt tgccagtcgg tttcggaaag actcgagcac tgagatggtt
      181 agaaccaact tggctcatag aaagtctctg tctcagaagg agaacagaca cagggtgtat
      241 gagcgaaaca gacacttcgg tttgaaggac gtcaacattc cactggaagg gcgagagctt
      301 ggtaatatac acgagacatc gcaagacctc tctccagaga aggccagctc caaaacaagg
      361 tcagtaaaaa tggtcctgag tgaccaacgg aagcagctcc tccagaagta caaggaagaa
      421 aaacaacttc aaaaactgaa agaacagcga gagaaagcca aacgtggagt gttcaaagtg
      481 ggtctctata gacccgctgc gcctggcttt cttgtcacag accagagggg tgcgaaagct
      541 gagccagaaa aggcttttcc acatactgga cggattacaa gatcaaagac caaagaatat
      601 atggagcaga ctaagattgg tagcaggaat gttcctaaag caacccagag tgaccaaaga
      661 caaacttctg aaaaacaacc attagacaga gagagaaaag ttatgcagcc tgtgctgttc
      721 acgtcaggga aagggactga atcagcggct actcagaggg ccaagctgat ggcccgaaca
      781 gtgtcatcca ctacaagaaa gccagtcaca agagccacga atgagaaagg atcagaaaga
      841 atgagaccaa gtggagggag acctgccaaa aaaccagaag gcaagccgga caaggttatt
      901 ccttccaaag ttgagcggga cgaaaagcat ttggattcgc agaccaggga aacaagtgaa
      961 atgggtccgc tcggagtctt ccgagaagtg gaaagcttgc ctgcaacagc ccctgcccaa
     1021 gggaaggaaa ggaagtcctt tgcccccaag cactgtgtct tccagccccc gtgtggtctg
     1081 aagagctacc aggtggctcc cctgagccct agaagtgcca acgctttcct gacacccaat
     1141 tgtgattgga accagttaag accagaagtt tttagcacta caactcaaga caaagcaaat
     1201 gaaatcttgg tacagcaagg attggagtcg ctaacagacc gtagtaaaga acatgtctta
     1261 aatcagaagg gtgcttctac ttcagattca aatcacgctt ctgtgaaagg agtcccatgc
     1321 tctgaagcga gcgaaggcca gacctctcag cccccccacg atgtgccata cttcagaaaa
     1381 atcctccaat cagaaactga caggctgacc tcgcactgcc aggagtggga ggggaagctg
     1441 gacctggaca tccctgatga agctaaaggt cttatccgta caacggttgg tcaaacaaga
     1501 ctccttatca aggagagatt cagacagttt gaaggactgg tggacaactg cgagtataaa
     1561 cggggtgaaa aggagacgac ctgcacagat ctggatggat tctgggatat ggttagtttt
     1621 caggtcgatg atgtgaacca gaaattcaac aacctgatca aacttgaggc gtcaggatgg
     1681 aaagacagca ataatccaag caaaaaagtc ctccggaaaa aaattgtgcc cggtagaaca
     1741 agcaaagcaa agcaggatga cgacggacga gcggcagcta ggagtcgcct tgcagccata
     1801 aagaatgcaa tgaaaggcag gccacagcag gaagtgcagg cccacgcagc agctccggag
     1861 aacacaaagg aagttgacaa aatagtgttt gatgctgggt ttttcagaat cgagagccca
     1921 gtgaagtcat tctcagtcct gtcttctgaa cgtcgttctc aaagatttgg aacacctctg
     1981 tctgccagca aagttgtgcc tgagggcagg gctgcagggg accttctgag acagaagatg
     2041 ccactgaaga agccggaccc tcagagcagc aagagcgagc atgttgatcg gacgttttca
     2101 gatggtcttg aaagcaggtg ccacgtagaa gacaccccct gtcctggaga gcaagattca
     2161 agtgacatag agcatgatgt aaataaaata aatgtcaaga tggattgttt ctctgttgaa
     2221 acgaatttgc ctcttcctgc tggtgatgct aataccaatc aaaaagaagc aatctcagct
     2281 gtggaaggag cgagctctgc agtcacctcc caggatttgc tgatgagcaa ccctgagaca
     2341 aatacctcct cacagagcaa cacctcacaa gaagaagctg aggcgtcgca gtcagtactg
     2401 ttacataaaa gtctcacttc tgaatgccac cttcttgaac cagcctcagc tgcaccagcc
     2461 cctgcactcg ggaggagacc agacagccag atcgcagcag acagttctcc tttggaggtg
     2521 acctcattct cttctcacca ctatgaccct gaagggaaca ccaggagggc tttaaattta
     2581 acatgacttt taatattaat ttaaataaac attcagtgct cgcctttaa
//
