LOCUS       XM_006503104            3988 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus DLG associated protein 3 (Dlgap3),
            transcript variant X5, mRNA.
ACCESSION   XM_006503104
VERSION     XM_006503104.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Dec 8, 2023 this sequence was replaced by
            NM_001426293.1.
            
            On Sep 21, 2020 this sequence version replaced XM_006503104.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..3988
                     /gene="Dlgap3"
                     /gene_synonym="DAP-3; DAP3; Prpl8; Sapap3"
                     /note="DLG associated protein 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     ESTs, 444 long SRA reads, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 27 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:242667"
                     /db_xref="MGI:MGI:3039563"
     CDS             434..3334
                     /gene="Dlgap3"
                     /gene_synonym="DAP-3; DAP3; Prpl8; Sapap3"
                     /codon_start=1
                     /product="disks large-associated protein 3 isoform X2"
                     /protein_id="XP_006503167.1"
                     /db_xref="GeneID:242667"
                     /db_xref="MGI:MGI:3039563"
                     /translation="MRGYHGDRGSHPRPARFADQQHMDVGPAARAPYLLGSREAFSTE
                     PRFCAPRAGLGHLSPEGPLSLSEGPSSVGPEGGPGGVGAGGGSSTFPRMYPGQGPFDT
                     CEDCVGHPQGKGATRLPPTLLDQFEKQLPVQQDGFHTLPYQRGPAGPGPGPGSGAAPE
                     ARSESPSRIRHLVHSVQKLFAKSHSLEAPGKRDYNGPKADGRGSSGGDSYSGPGSGGT
                     PTSHHHHHHHHHHHHQSRHGKRSKSKDRKGDGRHQTKATGWWSSDDNLDSDSGFLGGR
                     PPGEPGGPFCLDAPDGSYRDLSFKGRSGGSEGRCLACTGMSMSLDGQSVKRSAWHTMM
                     VSQGRDGYPGAGPGKGLLGPETKAKARTYHYLQVPQDDWGGYPTGGKDGEIPCRRMRS
                     GSYIKAMGDEESGDSDGSPKTSPKALARRFASRRSSSVDTARINCCVPPRIHPRSSIP
                     GYSRSLTTGQLSEEFNQQLEAVCGSVFGELESQAVDALDLPGCFRMRSHSYLRAIQAG
                     CSQDDDCLPLLAAPASVSGRPGSSFNFRKAPPPIPPGSQAPPRISITAQSSTDSAHES
                     FTAAEGPARRCSSADGLDGPTMGARTLELAPVPPRASPKPPTLIIKTIPGREELRSLA
                     RQRKWRPSIGVQVETISDSDTENRSRREFHSIGVQVEEDKRRARFKRSNSVTAGVQAD
                     LELEGLAGLATVATEDKALQFGRSFQRHASEPQPGPRAPTYSVFRTVHTQGQWAYREG
                     YPLPYEPPATDGSPGPTPVPAPGPGSGRRDSWMERGSRSLPDSGRTSPCPRDGEWFIK
                     MLRAEVEKLEHWCQQMEREAEDYELPEEILEKIRSAVGSTQLLLSQKVQQFFRLCQQS
                     LDLAGFWDLLQLSIEDVTLKFLELQQLKANSWKLLEPKEEKKVPPPIPKKPSRGRGVP
                     VKERSLDSVDRQRQEARKRLLAAKRAASFRHSSATESADSIEIYIPEAQTRL"
ORIGIN      
        1 gcgggctcct ggctcggccg ccctgcgcgg gggcgggggc gggggcggag cgcgcgggcg
       61 ggatcccccc gcctccccgt cctggtcccc gggaaatcca gcctccgtgg cttggccgcc
      121 tccggctccc gcgcccgcgg ccgctcagca ctcgctcggg gctccgcagc tggcgcggcc
      181 cctccgccgg gggctccgca gtgtcgggtc cgggagcccg cactcgctcc cgcagccgca
      241 gcgcccccgg cccgggccgc cggcaccatg taaccccggc tggagcccga ccgggccagg
      301 agccagtggt cctgcgcctg ctgaagttag gattctgcct ggtggtgggg atcctgacat
      361 caaggatggg acaccccgga tggaggttcc tggggcctgg cccccaacaa tatgaagagc
      421 ctttgctgag gccatgaggg gttaccatgg cgaccgaggc agccatcccc gcccagcccg
      481 ctttgctgac caacagcata tggacgtggg cccagctgcc agggccccgt acctgctggg
      541 ctccagggag gccttctcca ccgagccccg cttctgtgct ccgagagctg gcctgggaca
      601 cctttctcca gaaggacccc tgagcctgag tgagggtcca tcatcagtag gccctgaggg
      661 aggcccaggg ggggtggggg ctgggggagg cagcagtacc ttccccagga tgtaccccgg
      721 ccagggcccc ttcgacacct gtgaagactg tgtgggccac ccacagggca agggtgccac
      781 ccgactgcct cccacactcc tggaccagtt tgaaaagcaa ttgccagtcc aacaagatgg
      841 cttccacaca ctcccatacc agcgaggtcc agcagggcct ggtcctggac ctggatctgg
      901 cgctgccccc gaggctcgca gcgagagtcc tagccgcatc cggcacctgg ttcactcagt
      961 gcagaagctc tttgccaagt cccactctct ggaggcaccc gggaagcgag actataacgg
     1021 gcccaaggcc gacggaagag gtagctctgg gggagacagc tactctggtc caggctctgg
     1081 aggcaccccc acctcccacc accaccatca ccaccaccat caccaccacc accagtcccg
     1141 gcatggcaaa cggagcaaga gcaaggaccg caagggggat gggcgacacc agaccaaggc
     1201 cacaggctgg tggagctctg atgacaattt ggacagtgac agtggctttc tgggtgggag
     1261 acctcctgga gagcctggtg gccccttctg cctggatgct ccagatgggt cctacaggga
     1321 cttgagcttc aaggggcgtt cgggcgggtc ggaaggccgc tgccttgcct gcactggcat
     1381 gtccatgtcc ctggatggac agtcagtcaa gcgaagtgcc tggcatacca tgatggtcag
     1441 ccagggccgg gatggatacc caggggccgg gccaggcaag gggctcctgg gtccagagac
     1501 caaggccaaa gccaggactt atcactattt gcaggtgccg caagatgact gggggggtta
     1561 ccccacgggt ggcaaggatg gggagatccc ctgccgcagg atgcggagcg gcagctacat
     1621 caaagccatg ggggatgagg agagtggaga ctcagatggt agccccaaga cgtctccaaa
     1681 agcacttgcc cgacgctttg cctcccgccg ttcctccagc gtggacacag ccaggatcaa
     1741 ctgctgtgtc ccaccccgga tccatccccg gagttccatc cctggctaca gccgttccct
     1801 cacaactgga cagctaagcg aagagtttaa ccagcagctg gaggccgtgt gcgggtccgt
     1861 gtttggggag cttgagtccc aggccgtgga cgccctggac ctgcccggct gtttccgcat
     1921 gcggagccac agctacctcc gggccatcca ggccggctgc tctcaagacg acgactgcct
     1981 acccctcctt gctgcccctg cctctgtctc agggaggccc ggctcctcct tcaacttcag
     2041 aaaggccccg ccccccatcc cgccgggaag ccaggcccca ccccgcatct ccatcaccgc
     2101 ccagagcagc accgactctg cccacgagag cttcaccgca gcagagggcc cggcccggcg
     2161 ctgcagctcc gcggacgggc tggacggccc caccatgggc gcacgcaccc tcgagttggc
     2221 accggtgcca ccccgagcca gtcccaagcc ccccacactc atcatcaaga ccatccctgg
     2281 ccgggaggag ctgcggagct tggcacgaca gcggaagtgg cggccgtcca ttggggtgca
     2341 ggtggagaca atctcagact cggacaccga gaacaggagt cgaagagaat tccactccat
     2401 tggcgttcag gtggaagagg acaagaggcg ggcgaggttc aagcgctcca acagcgtgac
     2461 agccggtgtg caggcagacc tggagctgga gggcctggcc ggcctggcca ctgtggccac
     2521 agaagacaag gccctgcagt tcggacgctc cttccagagg cacgcctctg agccccagcc
     2581 cggccctcgg gcccccacct actcagtctt ccgcacggtc cacacacagg gccagtgggc
     2641 ctaccgcgag ggctacccac tgccgtatga gccgccggcc accgatgggt cgcctggccc
     2701 tacccctgtc ccagcccccg gtcccgggtc cggccgccgt gattcctgga tggagcgggg
     2761 ttcacgtagc ctccccgact caggccgcac gtccccctgc ccacgggatg gcgagtggtt
     2821 catcaagatg ctgcgggcag aggtggagaa actggaacac tggtgccagc agatggagcg
     2881 tgaggcggag gactatgagc tgcccgagga gatcttagag aagattcgca gtgccgtggg
     2941 cagtacgcaa cttctcctgt ctcagaaggt ccagcagttc ttcaggctgt gtcagcaaag
     3001 cttggacctg gccggtttct gggacctcct gcagctctcc attgaggatg tgaccctcaa
     3061 gttcctggaa ctacaacaac tcaaggccaa cagctggaaa ctcctggagc cgaaggagga
     3121 gaagaaggtc cctccgccga taccaaagaa gccctcgcgg gggcggggcg tgccggtgaa
     3181 ggagcgctcc ctggactcgg tggaccggca gcggcaggaa gcgcgcaagc ggctcctggc
     3241 ggccaagcgc gccgcctcgt tccgccacag ttcggctacc gagagcgcgg acagcatcga
     3301 gatctacatc cccgaggccc agaccaggct gtgacccgcc cgggccgccc agtccgaccc
     3361 gggcccgcgg ttttctaccc gtactgtaca cccagcgtcg aggtcactgt gaacgcgggc
     3421 agctccgtgc gcccgccctg ccggcaccgc acgccccggc ttctgcccgc cgcgctttcg
     3481 tgggtttttt accttcctga tcccacgcaa aggcgcccgg gctaggctgg gggtcgtgcc
     3541 tctccgccct gcgcccctca cttggaactc ccatcttcct ggtccgacgc tttgaccccc
     3601 tcaccttttt ccccccatgg gcaccatctc tgccattatt ttacccctcc acgggccagg
     3661 ccgggccggg tcccccatct gggctctgcg tcccccccac accccgcggg gctgggcttc
     3721 gtggggatca agcttcgtgg ctttttatga agaatcccga accccgccta ggagcccgcc
     3781 ccaccttccc agggctccac cctcagccct ctgcccacag ggcccaggga ccacagtggc
     3841 tggaccaatc caggaccagg gcgcctgggc ctctcccctt tcccacatct ggggagggga
     3901 gacaggggct ttccctcacc acacctgtgg ctgttcccac atccctttga gtatcccagg
     3961 aaaaataaaa ccgcagaact gcaccgga
//
