LOCUS       XM_006521764            4549 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus discs large MAGUK scaffold protein 1
            (Dlg1), transcript variant X5, mRNA.
ACCESSION   XM_006521764
VERSION     XM_006521764.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006521764.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4549
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..4549
                     /gene="Dlg1"
                     /gene_synonym="B130052P05Rik; Dlgh1; E-dlg/SAP97;
                     mKIAA4187; SAP-97; SAP97"
                     /note="discs large MAGUK scaffold protein 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 50 ESTs, 906 long SRA reads, 17 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 23 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:13383"
                     /db_xref="MGI:MGI:107231"
     CDS             206..2980
                     /gene="Dlg1"
                     /gene_synonym="B130052P05Rik; Dlgh1; E-dlg/SAP97;
                     mKIAA4187; SAP-97; SAP97"
                     /codon_start=1
                     /product="disks large homolog 1 isoform X5"
                     /protein_id="XP_006521827.1"
                     /db_xref="GeneID:13383"
                     /db_xref="MGI:MGI:107231"
                     /translation="MPVRKQDTQRALHLLEEYRSKLSQTEDRQLRSSIERVINIFQSN
                     LFQALIDIQEFYEVTLLDNPKCVDHSKQCEPVQPVTTWEIASLPSTAVTSETLPGSLS
                     PPVEKYRYQDEEVLPPEHISPQVTNEVLGPELVHVSEKNLSEIENVHGFVSHSHISPI
                     KPTEAVPPSSPIVPVTPALPVPAESTVVLPSAPQANPPPVLVNTDSLETPTYVNGTDA
                     DYEYEEITLERGNSGLGFSIAGGTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCI
                     LRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRRKPASEKIMEIKLIKGPKGLGFSIA
                     GGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVCLEEVTHEEAVTALK
                     NTSDFVYLKVAKPTTSSQSVDNHVSPSSCLGQTPTSPARYSPISKAVLGDDEITREPR
                     KVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAA
                     SHEQAAAALKNAGQAVTIVAQYRPEEYSRFEAKIHDLREQMMNSSVSSGSGSLRTSQK
                     RSLYVRALFDYDKTKDSGLPSQGLNFRFGDILHVINASDDEWWQARQVTPDGESDEVG
                     VIPSKRRVEKKERARLKTVKFNSKTRGDKGQSFNDKRKKNLFSRKFPFYKNKDQSEQE
                     TSDADQHVTSNASDSESSYLILITDEYGCSKGGQEEYVLSYEPVNQQEVNYTRPVIIL
                     GPMKDRVNDDLISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVTSREQMEKDIQEHKF
                     IEAGQYNNHLYGTSVQSVRAVAEKGKHCILDVSGNAIKRLQIAQLYPISIFIKPKSME
                     NIMEMNKRLTEEQARKTFERAMKLEQEFTEHFTAIVQGDTLEDIYNQVKQIIEEQSGP
                     YIWVPAKEKL"
ORIGIN      
        1 gagtccggcc ggagcgcacc cggggcgccc gcgtacgccg ctcgcgggaa ctttgcggcg
       61 gagccgcagg tgtggaggcc gcggaggggg gtgcatgagc ggcgcggaga gcggcggctg
      121 tccggtccgg cccctgctgg agtcgccgcc gggaggagac gaacgaggaa ccaggtgtgt
      181 gccgccttcc tgattctgga gaaaaatgcc ggtccggaag caagataccc agagagcatt
      241 gcatctgttg gaagaatatc gatcgaaact aagccaaact gaagacagac aactcagaag
      301 ttccatagag cgggttatta acatatttca gagcaacctc tttcaggctt taatagatat
      361 tcaagaattt tatgaagtga ccttacttga taatccaaaa tgtgtggatc attcaaagca
      421 gtgtgaacca gttcagcctg tgactacttg ggagattgcc agccttccaa gcactgccgt
      481 gacgtcagaa accctgcccg gcagccttag ccctccagta gagaaatacc ggtatcagga
      541 tgaagaggta cttcctcctg agcatatttc tccacaagtc acaaatgagg tgctaggtcc
      601 agaactggtc catgtctcag agaagaacct gtcagagatt gagaatgtcc atggatttgt
      661 ttctcattct catatctcac caataaagcc cacagaagct gttcctccct cctctcccat
      721 tgtccctgtg acccctgccc tgccagtccc tgctgagagt actgtcgtcc tgccctccgc
      781 accacaggca aatcctcctc cagtgctggt caacacagac agcttagaga caccaactta
      841 tgttaatggc actgatgcag attatgaata tgaggaaatc acacttgaaa ggggaaattc
      901 gggtcttggt ttcagcattg caggaggtac agacaaccca cacattggag atgactcaag
      961 tattttcatc accaaaatta tcacaggcgg agcggctgcc caggatggaa gattgcgggt
     1021 aaatgactgt atactgagag taaatgaagc agacgttcgt gatgtaaccc acagcaaagc
     1081 agtggaggca ttaaaagaag ctggatctat tgtgcgattg tatgtgaaaa ggcggaagcc
     1141 agcatcagaa aaaatcatgg aaataaagct cattaaaggt cctaaaggtc ttgggttcag
     1201 cattgctgga ggtgttggaa atcagcacat tcctggtgat aacagcatct atgtaaccaa
     1261 aataattgaa ggaggtgcag cacacaagga tggcaagctt cagattggag ataagcttct
     1321 agcagtgaac agtgtgtgtt tagaagaagt tactcatgaa gaagcagtga ctgccttaaa
     1381 gaatacatct gattttgttt atttgaaagt ggcaaaacca acaacttctt ctcaatctgt
     1441 tgacaaccat gtcagcccgt cctcctgctt gggccagacg ccaacgtcac cagccaggta
     1501 ctcacccatt tctaaagctg tgctcggaga tgacgagatc actagggaac ctagaaaagt
     1561 tgttcttcat cgtggctcaa caggacttgg ttttaacatt gtgggaggtg aagatggaga
     1621 agggattttt atctccttca tccttgctgg cggacctgct gatctaagtg gagagctcag
     1681 aaaaggagat cgcatcatat cggtgaacag tgttgacctc agagctgcaa gtcacgaaca
     1741 agcagcagct gcactaaaga acgcaggcca agccgtcacc atcgttgcgc aatatcgacc
     1801 cgaagagtac agtcgttttg aagctaaaat ccatgactta cgggagcaga tgatgaatag
     1861 cagtgtcagt tcagggtcag ggtctcttcg aaccagccag aagcgctccc tctatgtcag
     1921 agccctcttt gattatgaca agactaagga cagcgggctt cccagtcaag gactgaactt
     1981 ccgctttgga gacatcctcc atgtcatcaa tgcttctgac gacgagtggt ggcaagccag
     2041 gcaggtcacc ccagacgggg agagtgacga agtcggagtg attcctagta aacgaagagt
     2101 tgagaagaag gaacgagccc gattaaaaac ggtcaaattc aattctaaaa caagaggaga
     2161 taaagggcag tcattcaatg acaagcgtaa aaagaacctc ttttcccgaa aatttccctt
     2221 ctacaagaac aaggaccaga gtgaacagga aacgagtgat gctgaccagc acgtaacttc
     2281 taatgccagc gatagtgaaa gtagttacct aatcttgatt acagatgaat atggctgctc
     2341 aaaaggtggt caagaagaat atgttttatc ttatgagcca gtgaatcaac aagaagttaa
     2401 ttatacccga ccagtcatca tattaggacc tatgaaagac agagtaaatg atgacttaat
     2461 ctcagaattt cctgacaaat ttggatcctg tgtccctcat acaactagac cgaagcgtga
     2521 ctatgaggtg gatggacgag attatcattt tgtgacttca agggaacaga tggaaaagga
     2581 tattcaggag cataagttca ttgaagccgg ccagtataac aaccatctgt atgggacgag
     2641 cgtgcagtcc gtgcgagcag tggcagagaa gggcaaacat tgtatccttg atgtgtctgg
     2701 aaatgccata aagaggttgc agattgcaca gctttatcca atatctattt ttattaaacc
     2761 caaatccatg gaaaatatca tggaaatgaa caagcgccta acagaagagc aggccagaaa
     2821 aacatttgag agagccatga agctggagca ggagttcact gagcatttca cagctattgt
     2881 ccagggagac acgctggagg acatttacaa ccaagtgaaa cagatcatcg aagaacagtc
     2941 tgggccttac atctgggtcc cagcgaaaga aaagctatga agacggatgt tgttctttct
     3001 tttttccatg gtctcatctc ttgccctgtt gtggagtctg tcttcggtgt cctccacact
     3061 gacacagatc ccctcctcat ggtcggcagt tgtgcccgtt ttttgacatc tgtgtccctt
     3121 catgttgcat catctgtact attctgtgtt actcttggtt tctggccact tttcagaatg
     3181 aagatgaatg gcctgaccag ctatctaggg tttggggaga tgcaaaattg taaaattcct
     3241 taatgtttaa gggaaagtta actttaagag attttcagaa aagctttata tacattcttt
     3301 tccaatttca gtacaaatga aagaaaagtg gttttaatca gtgatttagt ggaccttgag
     3361 caactgtgca cgcttcactc taatagcatg gtttggccag tgtattagct ctcaagttct
     3421 ttcctcaatt gacttctgct attaaagtaa tgatttcatt aaaaacaaat aagaaaaata
     3481 gggatttatt tcaaaattaa tgtctgagtt aactcataat ttcaggagtt gtttgttatt
     3541 cgtggcaggt ctttattgtg tgccctccca tgggacacgt gccaggacta accatggagg
     3601 tgtgcagctc tgtgggaagt gagtggctct cgagccttgt ccgtacactg tggttacggc
     3661 tctgtcgcgg tcaaagaact cactttacac acagaactgc agacaagaaa gggtttcggt
     3721 ggacttgtag caatcatggc agtgggaagg agtccaattc atagcctaaa attttaatgt
     3781 atgcttaggg aggggtcaga ttttaatgac tattttaccc acaataactg cctattttgt
     3841 tataataaaa tatatataaa tatatataaa actttcttta actaaactct gtaactatgg
     3901 gaattatttt ctttacatag ttgcacacac aaacatatat atatatattt aaaatatatt
     3961 tttcttttgc cacctacttc taactttttg tttggttttt aaattaaata ttaattgatg
     4021 agacttaccg tccttaatca tgtgaactga agacaagtgt ccggtggcgg tgaggagaaa
     4081 cctctaggag attaggttgt gagtaggcgc caagcctgtt ctcctctttc ctacagaagt
     4141 tccagaaggt tcctaggttt cctgtcagtg ttgtgttctt gtcatggagt ttgatttcgg
     4201 tcctctgcct ttcctcctag ttctcctcat tttattaata gacagacaaa ctccattttt
     4261 gcgactcccc gagacacttc atcttgcgta gctgcgctga actagaattg cacaggtgtt
     4321 aagtaaacga cttgagaaag gttagtgaga ggcagatgcc ttcagaagtc actttctcta
     4381 gtccattatt aatatcattt ggcttccctt tgctctttgg aactgtttat tcgatacgtg
     4441 attttggcaa ctctttaaaa tttcctaaat gagtactggg ttgtaaagaa ttatccattc
     4501 catttatgag aaagaggaga acagctaata aactttattg taaaatcca
//
