LOCUS       XM_036163646            2173 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus DNA fragmentation factor, beta subunit
            (Dffb), transcript variant X5, mRNA.
ACCESSION   XM_036163646
VERSION     XM_036163646.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..2173
                     /gene="Dffb"
                     /gene_synonym="40kDa; 5730477D02Rik; CAD; CPAN; DFF40;
                     Didff"
                     /note="DNA fragmentation factor, beta subunit; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 168 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     22 samples with support for all annotated introns"
                     /db_xref="GeneID:13368"
                     /db_xref="MGI:MGI:1196287"
     CDS             546..1250
                     /gene="Dffb"
                     /gene_synonym="40kDa; 5730477D02Rik; CAD; CPAN; DFF40;
                     Didff"
                     /codon_start=1
                     /product="DNA fragmentation factor subunit beta isoform
                     X2"
                     /protein_id="XP_036019539.1"
                     /db_xref="GeneID:13368"
                     /db_xref="MGI:MGI:1196287"
                     /translation="MARNNCLRRWLSGSACCLRTMIRVSILSPHVKSRSGGLESRFRN
                     KSGYLRYSCESRIRGYLREVSAYTSMVDEAAQEEYLRVLGSMCQKLKSVQYNGSYFDR
                     GAEASSRLCTPEGWFSCQGPFDLESCLSKHSINPYGNRESRILFSTWNLDHIIEKKRT
                     VVPTLAEAIQDGREVNWEYFYSLLFTAENLKLVHIACHKKTTHKLECDRSRIYRPQTG
                     SRRKQPARKKRPARKR"
ORIGIN      
        1 gtctacgcac cacagttccg ggcaggaacg ttacaagtcc agtgtcgcta cggtaccgca
       61 gccctgcaat gtgcgcggtg ctccgccaac ccaaatgcgt caagttgcga gccctacata
      121 gcgcctgcaa gttcggcgtg gcggcccgga gctgccagga gctgctgcgt aagggctgcg
      181 tccgcttcca gctcccgatg cccggttccc ggctgtgcct gtacgaagat ggcacggagg
      241 tgacggacga ctgcttcccg ggccttccca acgacgctga gctcctattg ctcaccgctg
      301 gcgagacctg gcatggcttg tgtttaatga gccacatgcc ggcgtcatcc aggctgcacg
      361 gcaactgctg tcagatgagc aggccccact gaggcaaaag ctgctggccg atcttctgca
      421 tcacgtgagc cagaatatta ctgcagagac ccgggagcag gacccatcct ggtttgaagg
      481 tgatttaagg tacctgatgc aatgtaatcc tgggaaagta gtagttggct ggtctctacg
      541 gaataatggc gagaaacaac tgcctaagga gatggctcag cggcagtgct tgctgcttaa
      601 gaacgatgat ccgagtttcg atcctgagcc cccatgtgaa atccaggagt ggtggtttgg
      661 agtcgagatt caggaataag tcgggctatc tgagatacag ctgtgagagt cggatccggg
      721 gttacctaag agaggtgagc gcttacacct ctatggtgga tgaagcagct caagaagagt
      781 acctgcgagt ccttggctcc atgtgccaga agctcaaatc ggtgcagtac aatggcagct
      841 atttcgacag aggtgcagag gccagcagcc gcctctgtac tccagaagga tggttctcct
      901 gccagggccc ctttgacctg gagagctgtc tttccaagca ctccatcaac ccctatggca
      961 acagagagag ccggatcctc ttcagtacct ggaacctgga tcatataata gagaagaagc
     1021 gcaccgtggt acccacgctg gctgaagcca tccaggatgg gagggaggtg aactgggagt
     1081 acttctacag cctgctcttc actgccgaga acctgaagct ggtgcacatc gcctgccaca
     1141 agaagaccac acacaagctg gagtgcgacc gcagtaggat ctatcggcct cagacaggat
     1201 ccaggaggaa gcagcctgct cggaagaagc gccctgctcg gaagcgctag tgacacagcc
     1261 cagtgtgcag aggacggtca gtgccggtgc tcatcgtgtt cctgtggcag ggtcttcacg
     1321 ctcaccgccc cagggctgaa cttggccact gtgatgtgtg tggggtgcta gtttgtgctg
     1381 agcttttatg gcttctattt ctactgcaaa tggcagctct gactatacgc ctctgaaaga
     1441 aacggtgctt ctgggataaa tgtttgcatt ttataacgaa catgcaggac atcctctgct
     1501 gcattgttta aaatggcaga aggtgggaag ccatccagat gtctcctggt gtgaacagcc
     1561 aactgtggca ttattttgag ccatgtgaaa ctgatgtttt taatgggtta aataatggct
     1621 gtcatgaatt tcatgactca acactgatat atgtatgtac gcacgattgg agcaggttta
     1681 aactttcatg tggagaaata gggaactgtt aaaggcatag atggctttat ctgtgcaggg
     1741 aatgaccttg aactcatgat cttcctgcct catccctaga gctgggacca caggtgtgca
     1801 ccaccacacc tggcatttgg ttttgtaaat gtgtgtcagc ttgtgcatgg tctgaggaaa
     1861 tgacactctg taaccctggg ggattcagca gggctgagat tgatcaccaa gtacaatctc
     1921 ctacatcatg tattttataa tacttcattc tgctttttct ctgagaccgg gtctcactat
     1981 gtagctctgg ctggactgga gttcactata tagaccagcc aacctctgcc tcccgagtgc
     2041 tgggattaaa ggtgtgtgcc accacgccca acctgagttt atttttgaaa tgggcatttt
     2101 atatattttg taatgtttgg atttttatat ttgccatgta atcagaaaaa caataaagtg
     2161 tttctaaaat aga
//
