LOCUS       NM_172733               1688 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus deoxyribose-phosphate aldolase (Dera), mRNA.
ACCESSION   NM_172733 XM_989396
VERSION     NM_172733.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Bulusu,V., Prior,N., Snaebjornsson,M.T., Kuehne,A., Sonnen,K.F.,
            Kress,J., Stein,F., Schultz,C., Sauer,U. and Aulehla,A.
  TITLE     Spatiotemporal Analysis of a Glycolytic Activity Gradient Linked to
            Mouse Embryo Mesoderm Development
  JOURNAL   Dev Cell 40 (4), 331-341 (2017)
   PUBMED   28245920
REFERENCE   3  (bases 1 to 1688)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK083298.1.
            
            On May 4, 2006 this sequence version replaced XM_989396.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK083298.1, BC016218.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 67.32 cM"
     gene            1..1688
                     /gene="Dera"
                     /gene_synonym="2010002D22Rik; 2500002K03Rik; DEOC"
                     /note="deoxyribose-phosphate aldolase"
                     /db_xref="GeneID:232449"
                     /db_xref="MGI:MGI:1913762"
     exon            1..62
                     /gene="Dera"
                     /gene_synonym="2010002D22Rik; 2500002K03Rik; DEOC"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..988
                     /gene="Dera"
                     /gene_synonym="2010002D22Rik; 2500002K03Rik; DEOC"
                     /EC_number="4.1.2.4"
                     /note="putative deoxyribose-phosphate aldolase;
                     deoxyriboaldolase; phosphodeoxyriboaldolase;
                     2-deoxy-D-ribose 5-phosphate aldolase;
                     2-deoxyribose-5-phosphate aldolase homolog;
                     deoxyribose-phosphate aldolase (putative)"
                     /codon_start=1
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="NP_766321.1"
                     /db_xref="CCDS:CCDS20666.1"
                     /db_xref="GeneID:232449"
                     /db_xref="MGI:MGI:1913762"
                     /translation="MAAHCRGTELDLSWISKVQVNHAAVLRRAQQIQARRSVKKEWQA
                     AWLLKAVTFIDLTTLSGDDTFSNVQRLCYKAKYPIRADLLKALNMDDKGITTAAVCVY
                     PARVCDAVKALKAAGCSIPVASVATGFPAGQTHLKTRLEEIRLAVEDGATEIDVVINR
                     TLVLTGQWEALYDEVTQFRKACGEAHLKTILATGELGSLTNVYKASLVAMMAGSDFIK
                     TSTGKETVNATFPVAIVMLRAIRDFFWKTGNKVGFKPAGGIRTAKESLAWLSLVKEEL
                     GDEWLTPDLFRIGASSLLSDIERQIYHHVTGRYAAYHDLPMS"
     exon            63..160
                     /gene="Dera"
                     /gene_synonym="2010002D22Rik; 2500002K03Rik; DEOC"
                     /inference="alignment:Splign:2.1.0"
     exon            161..308
                     /gene="Dera"
                     /gene_synonym="2010002D22Rik; 2500002K03Rik; DEOC"
                     /inference="alignment:Splign:2.1.0"
     exon            309..404
                     /gene="Dera"
                     /gene_synonym="2010002D22Rik; 2500002K03Rik; DEOC"
                     /inference="alignment:Splign:2.1.0"
     exon            405..539
                     /gene="Dera"
                     /gene_synonym="2010002D22Rik; 2500002K03Rik; DEOC"
                     /inference="alignment:Splign:2.1.0"
     exon            540..668
                     /gene="Dera"
                     /gene_synonym="2010002D22Rik; 2500002K03Rik; DEOC"
                     /inference="alignment:Splign:2.1.0"
     exon            669..781
                     /gene="Dera"
                     /gene_synonym="2010002D22Rik; 2500002K03Rik; DEOC"
                     /inference="alignment:Splign:2.1.0"
     exon            782..931
                     /gene="Dera"
                     /gene_synonym="2010002D22Rik; 2500002K03Rik; DEOC"
                     /inference="alignment:Splign:2.1.0"
     exon            932..1688
                     /gene="Dera"
                     /gene_synonym="2010002D22Rik; 2500002K03Rik; DEOC"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagcaagggt tggctttcag cggtggccac aatggctgct cactgccggg gcacagagct
       61 cgatcttagc tggatctcca aagttcaagt gaatcacgcg gctgtgctga ggcgggccca
      121 gcagatccag gctcgcagaa gcgtgaagaa ggaatggcag gctgcgtggc tcctgaaagc
      181 tgtcacgttt atagatctta ccacgctttc tggcgatgac acgttttcca acgttcaacg
      241 actctgttat aaagccaaat atccaatccg ggcagacctc ttaaaagctt taaatatgga
      301 tgacaaaggc atcaccacag ctgcagtctg cgtttatccc gcccgggtgt gcgacgctgt
      361 gaaggcgctg aaggctgcgg gctgcagcat ccccgtggcc tcagtggcca ctggctttcc
      421 agctggacag actcatttaa agactcgatt ggaagagatc agactggccg tggaggatgg
      481 agctactgaa attgacgtgg tcattaacag gaccttggtg ctgacgggcc agtgggaagc
      541 tctctacgat gaggtcactc agtttcgaaa ggcctgtggc gaggcccatc tcaaaaccat
      601 cctagctacg ggcgaactgg gctctctcac caacgtctac aaagccagcc tggtagcgat
      661 gatggcagga tcagatttta ttaagacctc tactggaaag gaaacagtaa acgccacctt
      721 cccagtcgcc atcgtgatgc tgcgggccat tagagatttc ttctggaaaa ctggaaacaa
      781 ggtgggcttc aagcctgccg gaggcatccg cactgcaaag gagtccctgg cgtggctctc
      841 cctggtcaag gaggaactag gagatgagtg gctgacgcct gacctcttcc ggataggggc
      901 cagttctctg ctctcagaca tcgagagaca gatttaccat cacgtgactg gacgctacgc
      961 ggcttatcat gatcttccga tgtcttaggt cagcagccaa cccagaaaag catcttgcaa
     1021 caaattgttc aaaaaaaaat gtttttgcat aattgctaag gttatgtaat tttggaacag
     1081 ctaactgact ttccccatta aaatctcccc tgaaatcaac tcaaaacaat aaagggaaac
     1141 aaaccagctg aatctaaatg tggattcaga tcaggaaagg ttgaaatggt cttcgttacc
     1201 aggaggtcta catttattaa ttttgtgaag attccctctg aaaaaaactc agaataaaat
     1261 gtttctagta gcctgtactg cagaaaattc tgaacgtaca gtgaagttaa gttgcctgag
     1321 acctgagatc ctagggcagg cagggctgtg gagggaaggg tgcttgctac caaacctggc
     1381 acacctgttc agctctgagc aaccacaggg tggacgggga gagccggctc caaaggctgg
     1441 cctctgacat tcacacattc gtgtccccta cctctgacac ataataaata cacttaaaac
     1501 tgtgataaaa atgagaatgg gtgctatagc aagaggatac tctgcccccc tgtgctgcct
     1561 accaatgtgg agccctgccc cgggtgtcca cctgactctc tgtgctatac taaacattta
     1621 gtaattgttt tgctaatgag attgtgatgt tgttgcaaga aaatgtggat atcgctgaat
     1681 ttttaaat
//
