LOCUS       XM_017321484            4372 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus DENN domain containing 2A (Dennd2a),
            transcript variant X1, mRNA.
ACCESSION   XM_017321484
VERSION     XM_017321484.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017321484.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4372
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..4372
                     /gene="Dennd2a"
                     /gene_synonym="B930096L08Rik; C130031G22; mKIAA1277"
                     /note="DENN domain containing 2A; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 46 ESTs, 902 long SRA reads, 11 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:209773"
                     /db_xref="MGI:MGI:2444961"
     CDS             36..3326
                     /gene="Dennd2a"
                     /gene_synonym="B930096L08Rik; C130031G22; mKIAA1277"
                     /codon_start=1
                     /product="DENN domain-containing protein 2A isoform X1"
                     /protein_id="XP_017176973.1"
                     /db_xref="GeneID:209773"
                     /db_xref="MGI:MGI:2444961"
                     /translation="MDLSRGSREPVRRSSAQKRLPGVSLGADMVTVCKQATDSHSPTG
                     TLSYRLADKVKAEVAKTREVPGRQPLGRPIPLPKTHPAVPLGRSPSGSPHTLMLEARV
                     DMLSSNMIISGPAADLGAKEASRPWKKQLNSVPNSGPSARARAQPQPLSIKDKISKWE
                     GKKEPPASDPARQTDGQEDHLPSCKVERRGSELTRTKNGMRLETERLQNDSRARTVCQ
                     DTEQLPGPRPIDGQPELSQHRGRELKPSDLRFQSDHLSVLRQVKRLEKALKDGSAGLD
                     PQMPGTCYSPHCLPDKTEEDLPSLESHEKGGVLAAGRRAHHLEVREPGPEISEDWKGQ
                     ESVYRGSRWYPPKPFINPVPKPRRTFKHAGEGDKDVSPGISFKKEKRNLPPLPSLPPP
                     PPPLPSSPPPTSVNRRLWTGRQRPSADHRKSYEFEDLLQSSSENSRVDWYAQTKLGLT
                     RTLSEENVYEDILDPPMKENPYEDVELHGRCLGKKCVLTFPASPTSSIPDTSTKQSLS
                     KSAFFRQNSERRNLKLLDTRKLSRDGAGSPLRTSPPSTPSSPDDTFFNLGDLQNGRKK
                     KKIPRLVLRINAIYEARRGKKRVKRLSQSTESNSGKVTDENSESDSDTEEKLKAHSQR
                     LVNVKSRLKQAPRYSSLDRDLIEYQERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLK
                     LEKSFKFMREAEDQLKAIPQFCFPDAKDWAPVQEFTSETFSFVLTGEDGSRRFGYCRR
                     LLPGGKGKRLPEVYCIVSRLGCFSLFSKILDEVEKRRGISPALVQPLMRSVMEAPFPA
                     LGKTIIVKNFLPGSGTEVIELCRPLDSRLEHVDFESLFSSLSVRHLVSVFASLLLERR
                     VIFIADKLSTLSKCCHAMVALIYPFSWQHTYIPVLPPAMIDIVCSPTPFLIGLLSSSL
                     PLLRELPLEEVLVVDLINDRFLRQMEDEDSILPRKLQVALEHILEQRNDLACDQDGGP
                     LDCVHGPESSSLSEVVSEAFVRFFVEIVGHYPLFLTSGEERSLQREAFRKAVSSKSLR
                     RFLEVFMETQTFRGFIQERELRRQDAKGLFEVRAQEYLETLPSGEHSGVNKFLKGLGN
                     KMKFLHKK"
ORIGIN      
        1 ctggttctcg gcccctggct aagcgcatct caagaatgga cctcagtcgg ggtagcagag
       61 aaccggttcg gcgatcttca gcacagaaaa ggcttcctgg agtctctctt ggtgctgaca
      121 tggtgaccgt gtgcaagcag gccacagaca gccacagccc aactggaact ctgagctaca
      181 gattggctga caaggtcaag gcagaagttg caaagactag ggaagtacct ggaaggcaac
      241 cacttgggag gcccattcct ttgccgaaga ctcatccagc agtgcccttg ggaaggagtc
      301 cctccgggag cccccacacc ctcatgctgg aggccagagt ggacatgctc agctccaaca
      361 tgatcatcag tggcccggct gcagaccttg gcgctaaaga agccagcaga ccctggaaga
      421 agcagcttaa cagtgtcccg aactctggac catccgcccg agccagagcc cagccccagc
      481 ccctcagcat aaaggacaag atatccaagt gggaaggcaa gaaggagcca cccgcctccg
      541 atcccgccag gcaaacagat ggccaagagg accacctgcc atcctgcaag gtagagagaa
      601 gaggcagtga gctcaccaga actaagaatg gaatgaggct tgaaacagag agattgcaaa
      661 atgacagccg ggcaagaact gtgtgtcagg acacagaaca gttgccaggc ccgaggccta
      721 tcgatggaca gccagagctc agccagcacc gaggtcgtga gctgaaaccc agcgatctac
      781 gctttcaaag tgaccatctc tctgtgctga gacaggtcaa gagactagag aaggccttga
      841 aggatggctc cgctggcttg gaccctcaga tgccggggac ttgttattca cctcactgtc
      901 tgcctgacaa aacagaggaa gacctgccca gtcttgaaag ccacgagaag gggggtgtct
      961 tagcagctgg ccggagagct caccacctgg aggtcaggga gccgggccct gagatttcag
     1021 aggattggaa aggccaggag agtgtctata ggggctccag gtggtacccc ccaaagcctt
     1081 ttatcaaccc tgtccccaag ccccgcagaa cattcaaaca tgctggagaa ggggacaagg
     1141 atgtcagccc aggcatcagc ttcaagaaag agaagagaaa cctgcctccc ctgccctctc
     1201 tgcctccccc tcccccaccg ctgccttcct cccctcctcc cacttccgtg aatagaagac
     1261 tgtggaccgg gaggcagaga cccagtgctg accacagaaa gtcctatgag ttcgaggact
     1321 tactacagtc ttcctcagag aacagcaggg tggactggta tgcacagacc aaattgggac
     1381 tcacacgcac tttatcggag gagaacgtct atgaagacat tctagatccg ccaatgaagg
     1441 aaaatcctta tgaagatgtg gagctgcatg gccgctgcct gggcaagaag tgtgtcttga
     1501 ctttccccgc atctcccacc tcttccatcc cggacacgtc caccaagcag tccttgtcca
     1561 agtctgcatt tttccggcag aactcagaaa gaagaaactt gaagctgttg gacactagga
     1621 agcttagtcg ggatggagct gggtccccgc tgaggaccag tcctccctct acacctagca
     1681 gcccggacga cacgttcttt aaccttggag acctacagaa tggcaggaag aagaaaaaga
     1741 tccccaggct ggtattgagg atcaatgcca tttatgaggc ccggagagga aagaaacggg
     1801 tgaagaggct atcccagtcc acggagagca actcaggaaa agtgacagat gagaacagtg
     1861 agtctgacag cgacacagag gagaagctga aagctcacag ccagcgcctg gtcaatgtga
     1921 agtctcgcct gaagcaggcc cctcgatact catcgcttga ccgggatctc attgagtacc
     1981 aagagaggca actcttcgag tacttcgtgg ttgtgtctct gcacaagaag caggcagggg
     2041 ccgcctacgt gccagagctc acccagcaat ttcctctgaa gttagaaaag tcattcaagt
     2101 tcatgagaga ggctgaggac cagctgaagg ctatccccca gttctgcttc cccgatgcta
     2161 aggactgggc tcctgtccag gagtttacca gtgaaacatt ctcgtttgtc ttaactggag
     2221 aagacgggag cagaaggttc ggttactgcc gaagactgct gcctgggggc aaagggaagc
     2281 ggcttcctga ggtttattgc attgtgagcc gcctgggatg cttcagcctc ttttcaaaga
     2341 tcttggatga ggtggaaaag aggagaggaa tctcccctgc cctcgtgcag cccctcatga
     2401 ggagcgtcat ggaagcccct ttcccagccc tgggcaaaac catcattgtc aagaacttcc
     2461 tgccaggctc ggggactgag gtgattgagc tgtgccgacc gctggactcc cggctagagc
     2521 acgtggactt tgagtctctg ttctcctccc tcagtgtccg acacttggtc agtgtctttg
     2581 cctccctcct tctggaaagg agagtcatct tcatcgcaga caaactcagc actctgtcca
     2641 aatgctgcca cgcaatggtg gcgctcatct accccttcag ctggcagcac acctacatcc
     2701 cggtgctacc gcccgccatg atcgacatag tgtgctcgcc cacgcccttc ctcatcgggc
     2761 tgctctccag ctcgctgcct ctgctcaggg agctgccact ggaagaggtt ctcgtggtcg
     2821 atctcatcaa tgatcggttc ctcaggcaga tggaggacga ggattccatt ctgccccgga
     2881 agcttcaggt tgccctggaa cacattctgg agcagaggaa tgacctggcc tgtgaccagg
     2941 atggaggccc gctggactgt gtgcacggcc ctgaatccag ttccttgagt gaggtggtgt
     3001 ccgaagcctt tgtccgcttt tttgtggaga ttgtgggcca ctaccccctg ttcctgacat
     3061 cgggtgagga gagaagcctg caacgagagg ccttcagaaa agctgtctcc tctaagagcc
     3121 tgcggcgctt cctggaggtc ttcatggaga cccagacgtt ccgtggcttc atccaggagc
     3181 gggaactacg caggcaagat gccaaaggtc tgtttgaagt ccgagcccag gagtacctgg
     3241 aaaccctgcc cagcggagag cacagcggag tcaataaatt cctcaaggga ctgggcaata
     3301 aaatgaagtt tctccacaag aaataaccct catcttggcc caagggaaaa cctcctccct
     3361 acgccccagt cctcccagga tggacccctt agctgggcag gtggcacgcg ctcacaacag
     3421 ctccggaagg gaccagccag catgcagaat gttgttactg tggttagttg cttctgggac
     3481 ctttaaatct tagatattaa aagagaagaa gaaggaaagt gtttggctct tccttcattc
     3541 agctctcctg ccccatctca tcgcctctgg gccagctcat tgactctgtg gagccaggag
     3601 ttaggaagcg cggcagccac agaaacactt ctgcccacgc cactgcttct tccgcactgg
     3661 tctatgacgc cacctggtgg cagagactgg actttactgt tcttgactac attttctttt
     3721 tttttctcct agaagccgta tagctccatt catgccccaa aagtctgtgg cttttagagg
     3781 gacacattta aaaaaacagg aaatcttgtt aactggtaat aaaatgttct aagggtcctg
     3841 aagtttctat ttcctgtggc ccaaccatga cacttaggcc actgctgtga gcctgttcct
     3901 cttgaccaac aaagctagga gaggtttctg tagttgcttc tcttttatga gagagaggac
     3961 ccgaatcagc tgacctgtgg ggacagtaag agtctgcagg agccctgtgt gcagcaaagg
     4021 aaggttctcg ggctggcctc ggggctgcca ccccgatact gtgaatgcca ccaaaaactg
     4081 actacatctg gatcgcctct gacctgggca ggattaatag gagtgcgtgg ctgggatgtt
     4141 ggaggtagcc agagaaagca ggtgagcaca gcacgggggc tcagggaccg attccacaag
     4201 ctcctaggct taggtaactt tctgatagca atattctgtg tatttttata ttgcccccaa
     4261 gtgatcacag ttagtatttt ggaatatacg ttcttttcta acttatttta tattatactg
     4321 ttttacttaa gaacttcagg tgaataaata aataagtata tctttatcaa ca
//
