LOCUS       NM_001033819            1973 bp    mRNA    linear   ROD 08-AUG-2023
DEFINITION  Mus musculus delta 4-desaturase, sphingolipid 1 like (Degs1l),
            transcript variant 1, mRNA.
ACCESSION   NM_001033819 XM_890164 XM_906406
VERSION     NM_001033819.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1973)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC119911.10.
            
            On Mar 18, 2023 this sequence version replaced NM_001033819.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK136575.1, AK162201.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849376 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-145               AC119911.10        93725-93869         c
            146-888             AC119911.10        89626-90368         c
            889-1973            AC119911.10        84364-85448         c
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 84.52 cM"
     gene            1..1973
                     /gene="Degs1l"
                     /gene_synonym="9130409I23Rik"
                     /note="delta 4-desaturase, sphingolipid 1 like"
                     /db_xref="GeneID:619326"
                     /db_xref="MGI:MGI:3588271"
     exon            1..145
                     /gene="Degs1l"
                     /gene_synonym="9130409I23Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             64..1026
                     /gene="Degs1l"
                     /gene_synonym="9130409I23Rik"
                     /EC_number="1.14.19.17"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="sphingolipid delta(4)-desaturase DES1-like
                     isoform 1"
                     /protein_id="NP_001028991.1"
                     /db_xref="CCDS:CCDS35809.1"
                     /db_xref="GeneID:619326"
                     /db_xref="MGI:MGI:3588271"
                     /translation="MRKLASLEDAEWVYNDRLHNDRRREILAKYPEIKSLMKPDPNLI
                     WIITIIILIQLALLYLVKDLEWKWVIFCAYVFGGSINHSLIIASHEISHNFPFGHRKA
                     LWNRWFGIFANLPIGIPCSISFKKYHTDHHRFLGVDGVDVGVPHYLEGWFFCTAYRKL
                     VWIAFQPLFITFRLLFINRKPISYLEIINTVVQITFDIIVYYVFGVKSLVYMLVASML
                     GLGLHPISGNLIGDHYMFLKDQETFSYYGPLNLLTFNVGYHNEHHDFPNIPGKDLPLV
                     RKIAAEYYDKLPHHISWIKVLYDFVMDNTISSYSRMKKRLPKRK"
     exon            146..888
                     /gene="Degs1l"
                     /gene_synonym="9130409I23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            889..1973
                     /gene="Degs1l"
                     /gene_synonym="9130409I23Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatcctgtca ccctctcgga gttgcacctg gagcagatcc tagggcaggt gtgcacacca
       61 gccatgagga aactcgcatc actggaagat gctgagtggg tgtacaatga tcggctgcat
      121 aatgatcgac gtcgggagat attggcaaaa tatccagaga taaaatcttt gatgaaaccg
      181 gaccctaacc tgatctggat cataaccata ataattctta tccagctggc tttgttgtac
      241 ttagtcaaag acttggagtg gaaatgggtc atattttgtg cctatgtatt tggtggttct
      301 attaaccact cactaattat agcttctcat gagatctctc ataatttccc ctttggccac
      361 cgcaaagcac tgtggaaccg ctggtttgga atatttgcta acctcccgat tgggattcca
      421 tgctcgattt cctttaagaa ataccacacg gaccaccatc gattccttgg agttgatggt
      481 gtcgacgtag gtgttcctca ctatctcgag ggctggttct tctgcaccgc ttacaggaag
      541 cttgtctgga ttgcttttca acctctcttt attacttttc gacttctatt tatcaaccgc
      601 aaaccaattt cttatctgga aatcatcaat actgttgttc agatcacctt tgacattata
      661 gtttactatg tctttggggt taaatcctta gtctacatgc tggtagcctc catgcttggt
      721 ctgggtttgc acccaataag tggcaatctt ataggggacc attacatgtt cttaaaggac
      781 caggaaacat tctcctatta tgggcctctg aacttgctca ccttcaatgt gggctatcac
      841 aacgagcacc atgacttccc caacattcct ggaaaagacc ttcccttggt gaggaaaata
      901 gcagctgaat actatgacaa actcccccat cacatctcct ggatcaaagt actgtatgat
      961 tttgtgatgg ataacacaat aagttcctat tcacggatga agaagaggct tccaaaaagg
     1021 aaatagcttt tagagcaagc actgtcagag tcaaagcaaa gtctgcaaag atttttaatt
     1081 gctgataatg tggatttttt tttcttgtta aaattaagag ctgttagaag ccatctagga
     1141 aaggctatgg caagcaagtg agttttctgg tgatgaccca ctgttttgca gggctgtaac
     1201 agatgtactc tgagatgcaa ggtcctcaga catttcatcc caggattgct tcttgctacc
     1261 aatatgcctt tcctgccact cttacatagc ctaatgattc ctgggcatct gccaactata
     1321 ttgggacgat ttcctgcaga atcaatatga agatggtact ttcatgtagt tatgctgtgt
     1381 agatgaactg atgacttcat atttctgttt atagaactcc taaattgata taggtactct
     1441 caagccccct atagaacaaa cgctgcaaat agagctctgt aaaccttcat gtgtcatggg
     1501 ataattgcat tagataaaga aaccaggctt ggatcaaatt ccttctaggt cagaaatgaa
     1561 gccactatct ggtaactagg ggccataaac tgggaatggg aaattgattg taggtgaaag
     1621 gacaaaacat aaatgatgga ctaaaaccag tcttagccaa gatttcaaaa tagtaagaca
     1681 caaggcagat gatttgtctc ttgacaaatt ctgtgctaac ttatgacata aaaattattg
     1741 ctttaaactt ttaatgagct tatggatcta gcaatagtag ataatggatg tttagtcagg
     1801 tactagccta atggaaagac atgtaaatga ttctgttgta attccttaag ccttattgct
     1861 ctatgaattt atggaatgta aaaatgctta gaaaaccatg tgattaattt tcctgagaaa
     1921 gtataaaaac taagaacaac aataaaatgg tagtgcaaac tttttcagct tca
//
