LOCUS       NM_001037751             444 bp    mRNA    linear   ROD 08-AUG-2023
DEFINITION  Mus musculus defensin beta 48 (Defb48), mRNA.
ACCESSION   NM_001037751
VERSION     NM_001037751.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Amid C, Rehaume LM, Brown KL, Gilbert JG, Dougan G, Hancock RE and
            Harrow JL.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Patil AA, Cai Y, Sang Y, Blecha F and Zhang G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC090659.19.
            
            On Oct 7, 2022 this sequence version replaced NM_001037751.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DQ012044.1, BY721060.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-101               AC090659.19        99920-100020        c
            102-444             AC090659.19        93035-93377         c
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 33.23 cM"
     gene            1..444
                     /gene="Defb48"
                     /gene_synonym="Defb42; EG432867"
                     /note="defensin beta 48"
                     /db_xref="GeneID:432867"
                     /db_xref="MGI:MGI:3646223"
     exon            1..101
                     /gene="Defb48"
                     /gene_synonym="Defb42; EG432867"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..307
                     /gene="Defb48"
                     /gene_synonym="Defb42; EG432867"
                     /note="beta-defensin 42"
                     /codon_start=1
                     /product="putative beta-defensin 109B precursor"
                     /protein_id="NP_001032840.1"
                     /db_xref="CCDS:CCDS36944.1"
                     /db_xref="GeneID:432867"
                     /db_xref="MGI:MGI:3646223"
                     /translation="MRLYLLLSTLFFLLDLLPQVRSGMGASETLCVSLQGTCRRDICK
                     LIEDEIGACRRRWKCCRLWWILIPIPTPVIFSDYQEPLQSKVK"
     exon            102..444
                     /gene="Defb48"
                     /gene_synonym="Defb42; EG432867"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aagagtccag actccacatc ttcacttcac agacccttcc accatgagac tgtatctgct
       61 cctctctact ctattcttcc tcttggacct tttaccccaa gttagaagtg ggatgggtgc
      121 gtctgagacg ctctgcgtca gtctgcaggg cacgtgcaga agagacatct gcaaactgat
      181 agaagacgag atcggtgctt gccggagaag atggaaatgt tgcaggctgt ggtggattct
      241 catacccatt ccaacgccag ttatcttctc agactatcaa gaacccctcc agtctaaggt
      301 gaagtaagac cagagtaaac acagaaagga cgtctcacac ggccggctaa agcaatggaa
      361 ccttcacacc gaacacttcc agctctttaa tcaggttcta ttcagcttgc caataaaatc
      421 aataaaataa atattgattt caaa
//
