LOCUS       NM_001037752             388 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus defensin beta 45 (Defb45), mRNA.
ACCESSION   NM_001037752 XM_485084 XM_905185
VERSION     NM_001037752.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Amid C, Rehaume LM, Brown KL, Gilbert JG, Dougan G, Hancock RE and
            Harrow JL.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Patil AA, Cai Y, Sang Y, Blecha F and Zhang G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK005919.1.
            
            On Apr 5, 2007 this sequence version replaced NM_001037752.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK005919.1, BC132226.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-388               AK005919.1         2-389
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 75.41 cM"
     gene            1..388
                     /gene="Defb45"
                     /gene_synonym="Defb27"
                     /note="defensin beta 45"
                     /db_xref="GeneID:433490"
                     /db_xref="MGI:MGI:3650541"
     exon            1..147
                     /gene="Defb45"
                     /gene_synonym="Defb27"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..293
                     /gene="Defb45"
                     /gene_synonym="Defb27"
                     /note="beta-defensin 27"
                     /codon_start=1
                     /product="beta-defensin 27 precursor"
                     /protein_id="NP_001032841.1"
                     /db_xref="CCDS:CCDS38278.1"
                     /db_xref="GeneID:433490"
                     /db_xref="MGI:MGI:3650541"
                     /translation="MKTAVLTMALLLLSQVIPGTPERCWKSFGVCREECAKKESFYIF
                     CWNGKLCCVKPKNVPLWSQNLD"
     exon            148..388
                     /gene="Defb45"
                     /gene_synonym="Defb27"
                     /inference="alignment:Splign:2.1.0"
     regulatory      368..373
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Defb45"
                     /gene_synonym="Defb27"
                     /note="putative"
     polyA_site      388
                     /gene="Defb45"
                     /gene_synonym="Defb27"
                     /note="putative"
ORIGIN      
        1 ctcagctgat tataaggagc agggacccag agctctgctc tttgtcttgt gctttgatag
       61 acacaagcca gcaccctgaa tttcctgaag tcatgaagac tgcggtgtta actatggctc
      121 tgctgctgct gtcccaggtc attccaggga cccctgaaag atgctggaag tcttttggtg
      181 tctgccgtga agagtgtgcc aagaaagaaa gtttctacat cttctgctgg aatggcaaac
      241 tgtgctgtgt gaagcccaag aatgtgcccc tgtggtcaca gaatttagat tagcactcta
      301 aatcccaagg ccacagaaat gaagttggac ctcgaaagag tccaccttgg cagtttccct
      361 gagcttcatt aaagcggctt tggctggc
//
