LOCUS       NM_001039119             426 bp    mRNA    linear   ROD 07-OCT-2024
DEFINITION  Mus musculus defensin beta 33 (Defb33), mRNA.
ACCESSION   NM_001039119
VERSION     NM_001039119.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Amid,C., Rehaume,L.M., Brown,K.L., Gilbert,J.G., Dougan,G.,
            Hancock,R.E. and Harrow,J.L.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 426)
  AUTHORS   Patil,A.A., Cai,Y., Sang,Y., Blecha,F. and Zhang,G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY092288.1, BC145766.1 and BY461224.1.
            
            On Apr 15, 2010 this sequence version replaced NM_001039119.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY456546.1, CR514167.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-62                BY092288.1         2-63
            63-387              BC145766.1         1-325
            388-426             BY461224.1         407-445
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8"
     gene            1..426
                     /gene="Defb33"
                     /gene_synonym="BD-33; EG654453"
                     /note="defensin beta 33"
                     /db_xref="GeneID:654453"
                     /db_xref="MGI:MGI:3647176"
     exon            1..40
                     /gene="Defb33"
                     /gene_synonym="BD-33; EG654453"
                     /inference="alignment:Splign:2.1.0"
     exon            41..209
                     /gene="Defb33"
                     /gene_synonym="BD-33; EG654453"
                     /inference="alignment:Splign:2.1.0"
     CDS             152..340
                     /gene="Defb33"
                     /gene_synonym="BD-33; EG654453"
                     /note="beta-defensin 33"
                     /codon_start=1
                     /product="beta-defensin 33 precursor"
                     /protein_id="NP_001034208.1"
                     /db_xref="CCDS:CCDS57609.1"
                     /db_xref="GeneID:654453"
                     /db_xref="MGI:MGI:3647176"
                     /translation="MRLLFLLFILLVCLAQTTSGRKRNSKFRPCEKMGGICKSQKTHG
                     CSILPAECKSRYKHCCRL"
     exon            210..426
                     /gene="Defb33"
                     /gene_synonym="BD-33; EG654453"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcacattac ctgtggaggg cagagggagc caccttctag gtgcatcatt ccaactctcc
       61 tagatcaatc tgctgccatc ggtgtgcact gaaggacttg ccctcacaca ccgctgctcc
      121 ctccctctac cccaagaccc cacttctcac catgaggctg ttatttcttc tcttcatcct
      181 ccttgtgtgt cttgctcaga ctacatcagg gcgcaaaaga aactcaaagt ttcgtccgtg
      241 tgagaaaatg ggtggcattt gcaagtctca gaaaactcac ggatgctcta tcctgcctgc
      301 agaatgcaag agtcgataca aacactgctg taggttgtga tggccagttg ctgatacatg
      361 cagtactgcc agagagcagt caactgctct gatttctggg aaataaaaac accacgatgt
      421 acagct
//
