LOCUS       NM_001379477             360 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus defensin beta 21 (Defb21), transcript variant 2, mRNA.
ACCESSION   NM_001379477 XM_030251826
VERSION     NM_001379477.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   Lewandowski JP, Du F, Zhang S, Powell MB, Falkenstein KN, Ji H and
            Vokes SA.
  TITLE     Spatiotemporal regulation of GLI target genes in the mammalian limb
            bud
  JOURNAL   Dev Biol 406 (1), 92-103 (2015)
   PUBMED   26238476
REFERENCE   2  (bases 1 to 360)
  AUTHORS   Patil AA, Cai Y, Sang Y, Blecha F and Zhang G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL845162.9.
            
            On Apr 6, 2020 this sequence version replaced XM_030251826.1.
            
            Transcript Variant: This variant (2) differs in the 5 UTR compared
            to variant 1. Variants 1 and 2 both encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BX630597.1, DQ141308.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849382
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-100               AL845162.9         54470-54569
            101-360             AL845162.9         55407-55666
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 75.31 cM"
     gene            1..360
                     /gene="Defb21"
                     /gene_synonym="4930525K10Rik; Gm121"
                     /note="defensin beta 21"
                     /db_xref="GeneID:403172"
                     /db_xref="MGI:MGI:2684967"
     exon            1..100
                     /gene="Defb21"
                     /gene_synonym="4930525K10Rik; Gm121"
                     /inference="alignment:Splign:2.1.0"
     CDS             22..324
                     /gene="Defb21"
                     /gene_synonym="4930525K10Rik; Gm121"
                     /codon_start=1
                     /product="beta-defensin 118 precursor"
                     /protein_id="NP_001366406.1"
                     /db_xref="GeneID:403172"
                     /db_xref="MGI:MGI:2684967"
                     /translation="MFYLPRAMRFLLLVLPVLALLPQVTPDYGAKKRCLKILGHCRRH
                     CKDGEMDHGSCKYYRVCCVPDLNSYNQNYAITWTTEETSTSEYDLSSDFIGVLRAI"
     exon            101..360
                     /gene="Defb21"
                     /gene_synonym="4930525K10Rik; Gm121"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccctgtgttc cagatgtctg gatgttctac ctcccaagag ccatgaggtt cctgctgctg
       61 gttcttcctg tccttgctct tctaccccaa gtgacaccag actacggtgc taagaaaaga
      121 tgcttgaaaa ttttggggca ctgcaggaga cactgcaaag atggagaaat ggaccatgga
      181 tcatgcaaat attaccgagt ctgctgcgtt ccagacctca acagctacaa tcaaaattat
      241 gctatcactt ggaccacgga ggaaacctct acatcagagt atgatctgtc ctcagatttc
      301 ataggtgtac ttagggcaat atagttgaag gagtgttaaa taaataaata agtaacctga
//
