LOCUS       NM_001177482             499 bp    mRNA    linear   ROD 08-AUG-2023
DEFINITION  Mus musculus defensin, alpha, 38 (Defa38), mRNA.
ACCESSION   NM_001177482 XM_001471602 XM_909671
VERSION     NM_001177482.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Patil A, Hughes AL and Zhang G.
  TITLE     Rapid evolution and diversification of mammalian alpha-defensins as
            revealed by comparative analysis of rodent and primate genes
  JOURNAL   Physiol Genomics 20 (1), 1-11 (2004)
   PUBMED   15494476
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC129197.4.
            
            On Oct 7, 2022 this sequence version replaced NM_001177482.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY761183.1, SRR5189685.179546.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849377, SAMN00849378
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-217               AC129197.4         133113-133329       c
            218-499             AC129197.4         132205-132486       c
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 10.35 cM"
     gene            1..499
                     /gene="Defa38"
                     /gene_synonym="CRS1C-2; Gm14851"
                     /note="defensin, alpha, 38"
                     /db_xref="GeneID:634825"
                     /db_xref="MGI:MGI:3709605"
     exon            1..217
                     /gene="Defa38"
                     /gene_synonym="CRS1C-2; Gm14851"
                     /inference="alignment:Splign:2.1.0"
     CDS             46..396
                     /gene="Defa38"
                     /gene_synonym="CRS1C-2; Gm14851"
                     /note="alpha-defensin related antimicrobial peptide;
                     cryptdin-related sequence peptide"
                     /codon_start=1
                     /product="defensin, alpha, 38 precursor"
                     /protein_id="NP_001170953.1"
                     /db_xref="CCDS:CCDS52503.1"
                     /db_xref="GeneID:634825"
                     /db_xref="MGI:MGI:3709605"
                     /translation="MKTLVLLSALALLAFQVQADPIQNTDEETKTEEQPEEEDQAVSV
                     SFGGTEGSALQDVAQRRFLWCRKCPVCQKCQVCQKCPVCPTCPQCPKQPLCEERQNKT
                     AITTQAPNTQHKGC"
     exon            218..499
                     /gene="Defa38"
                     /gene_synonym="CRS1C-2; Gm14851"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acacattgag ttcctgctca ctaatcttcc aggtgactcc cagtcatgaa gacacttgtc
       61 ctcctctctg cccttgccct gctggccttc caggtccagg ctgatcctat ccaaaacaca
      121 gatgaagaga ctaaaactga ggagcagcca gaggaagagg accaggctgt ttctgtctcc
      181 tttggaggca cagaaggctc tgctcttcaa gatgtagccc aacgaaggtt tctgtggtgc
      241 cggaagtgcc cagtgtgcca gaagtgccaa gtgtgccaga agtgccctgt gtgccccaca
      301 tgccctcagt gcccaaagca gccattgtgc gaagaaaggc aaaataaaac tgcaatcacc
      361 acccaagctc caaatacaca gcataaaggc tgttgagctg aatgtggaat ctgggttgag
      421 atgaccattt gcttttggtc cacacgatcc cattgtgctt agctcaattg caattccttc
      481 tctcataaac tccttgctg
//
