LOCUS       NM_001177522             404 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus defensin, alpha, 37 (Defa37), mRNA.
ACCESSION   NM_001177522 XM_001477133
VERSION     NM_001177522.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   Amid C, Rehaume LM, Brown KL, Gilbert JG, Dougan G, Hancock RE and
            Harrow JL.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC133094.4.
            
            On Apr 15, 2010 this sequence version replaced XM_001477133.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AV067145.1, AV066370.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849377, SAMN00849378
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-200               AC133094.4         53591-53790         c
            201-404             AC133094.4         52826-53029         c
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 10.35 cM"
     gene            1..404
                     /gene="Defa37"
                     /gene_synonym="Gm14850"
                     /note="defensin, alpha, 37"
                     /db_xref="GeneID:100041895"
                     /db_xref="MGI:MGI:3705236"
     exon            1..200
                     /gene="Defa37"
                     /gene_synonym="Gm14850"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..310
                     /gene="Defa37"
                     /gene_synonym="Gm14850"
                     /note="novel defensin-related cryptidin"
                     /codon_start=1
                     /product="alpha-defensin 5-like precursor"
                     /protein_id="NP_001170993.1"
                     /db_xref="CCDS:CCDS52510.1"
                     /db_xref="GeneID:100041895"
                     /db_xref="MGI:MGI:3705236"
                     /translation="MKTFVLLSALVLLAYQVQADPIHKTDEETNTEEQPGEEDQAVSI
                     SFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS"
     exon            201..404
                     /gene="Defa37"
                     /gene_synonym="Gm14850"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcaccaattc tccaggtgac ccccagccat gaagacattt gtcctcctct ctgcccttgt
       61 cctgctggcc taccaggtcc aggctgatcc tatccacaaa acagatgaag agactaatac
      121 tgaggagcag ccaggggaag aggaccaggc tgtgtctatc tcttttggag gccaagaagg
      181 gtctgctctt catgaagaat tgtctaaaaa gctgatatgc tattgtagaa taagaggctg
      241 caaaagaaga gaacgcgttt ttgggacctg cagaaatctt tttttaactt tcgtattctg
      301 ctgcagctga atatgcagat gacaaagata tgacaaccat cggctctgag gccactgatg
      361 ctggggtctg atgatcactt ctcaataaat tgtttgcaat atgc
//
