LOCUS       NM_001177481             403 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus defensin, alpha, 35 (Defa35), mRNA.
ACCESSION   NM_001177481 XM_001476866
VERSION     NM_001177481.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC161189.12.
            
            On Apr 11, 2010 this sequence version replaced XM_001476866.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AA871410.1, BX637241.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849377, SAMN00849378
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-200               AC161189.12        12646-12845         c
            201-403             AC161189.12        11882-12084         c
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 10.35 cM"
     gene            1..403
                     /gene="Defa35"
                     /gene_synonym="Gm10104"
                     /note="defensin, alpha, 35"
                     /db_xref="GeneID:100041688"
                     /db_xref="MGI:MGI:3711900"
     exon            1..200
                     /gene="Defa35"
                     /gene_synonym="Gm10104"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..310
                     /gene="Defa35"
                     /gene_synonym="Gm10104"
                     /codon_start=1
                     /product="uncharacterized protein LOC100041688 precursor"
                     /protein_id="NP_001170952.1"
                     /db_xref="CCDS:CCDS52501.1"
                     /db_xref="GeneID:100041688"
                     /db_xref="MGI:MGI:3711900"
                     /translation="MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSI
                     SFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS"
     exon            201..403
                     /gene="Defa35"
                     /gene_synonym="Gm10104"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcaacaattc tccaggtgac ccccagccat gaagacattt gtcctcctct ctgcccttgt
       61 cctgctggcc ttccaggtcc aggctgatcc tatccacaaa acagatgaag agactaatac
      121 tgaggagcag ccaggggaag aggaccaggc tgtgtctatc tcttttggag gccaagaagg
      181 gtctgctctt catgatgaat tgtcaaaaaa gctgatatgc tattgtagaa taagaggctg
      241 caaaagaaga gaacgcgttt ttgggacctg cagaaatctt tttttaactt tcgtattctg
      301 ctgcagctga atatgcagat gacaaagata tgacaaccat cagctctgag gccactgatg
      361 ctggggtctg atgatcactt ctcaataaat tgtttgcaat atg
//
