LOCUS       NM_001177485             422 bp    mRNA    linear   ROD 08-AUG-2023
DEFINITION  Mus musculus defensin, alpha, 30 (Defa30), mRNA.
ACCESSION   NM_001177485 XM_001471603 XM_003946262
VERSION     NM_001177485.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Amid C, Rehaume LM, Brown KL, Gilbert JG, Dougan G, Hancock RE and
            Harrow JL.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC166039.6.
            
            On Oct 6, 2022 this sequence version replaced NM_001177485.1.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AV070460.1, AV067046.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-217               AC166039.6         62143-62359         c
            218-422             AC166039.6         61379-61583         c
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 10.35 cM"
     gene            1..422
                     /gene="Defa30"
                     /gene_synonym="Gm15284"
                     /note="defensin, alpha, 30"
                     /db_xref="GeneID:100038927"
                     /db_xref="MGI:MGI:3808881"
     exon            1..217
                     /gene="Defa30"
                     /gene_synonym="Gm15284"
                     /inference="alignment:Splign:2.1.0"
     CDS             46..327
                     /gene="Defa30"
                     /gene_synonym="Gm15284"
                     /codon_start=1
                     /product="uncharacterized protein LOC100038927 precursor"
                     /protein_id="NP_001170956.1"
                     /db_xref="CCDS:CCDS52504.1"
                     /db_xref="GeneID:100038927"
                     /db_xref="MGI:MGI:3808881"
                     /translation="MKTLILLSALVLLAFQVQADPIQNTDEETKTEEQPGEEDQAVSV
                     SFGDPEGSSLQEESLRDLVCYCRARGCKGRERMNGTCSKGHLMYMLCCR"
     exon            218..422
                     /gene="Defa30"
                     /gene_synonym="Gm15284"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acacattgag ctcctactca ccaatcctcc aggtgtctcc cagccatgaa gacactaatc
       61 ctcctctctg ccctcgtcct gctggccttc caggtccagg ctgatcctat ccaaaacaca
      121 gatgaagaga ctaaaactga ggagcagcca ggggaagagg accaggctgt gtctgtctct
      181 tttggagacc cagaaggctc ttctcttcaa gaggaatcgt tgagagatct ggtatgctat
      241 tgtagagcaa gaggctgcaa aggaagagaa cgcatgaatg ggacctgcag taagggtcat
      301 ttaatgtaca tgctctgctg tcgctgaaca tggagaccac agagaacaag atgaccatga
      361 gtactgaggc cactgacgct ggtgcctgat gaccacttct caataaattg cttgcaatat
      421 gc
//
