LOCUS       NM_001170955             282 bp    mRNA    linear   ROD 29-AUG-2024
DEFINITION  Mus musculus defensin, alpha, 27 (Defa27), mRNA.
ACCESSION   NM_001170955 XM_001477034
VERSION     NM_001170955.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   Amid,C., Rehaume,L.M., Brown,K.L., Gilbert,J.G., Dougan,G.,
            Hancock,R.E. and Harrow,J.L.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC129174.3.
            
            On Jan 8, 2010 this sequence version replaced XM_001477034.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849377,
                              SAMN00849380 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-172               AC129174.3         40426-40597         c
            173-282             AC129174.3         39756-39865         c
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 10.35 cM"
     gene            1..282
                     /gene="Defa27"
                     /gene_synonym="Gm15299"
                     /note="defensin, alpha, 27"
                     /db_xref="GeneID:100041811"
                     /db_xref="MGI:MGI:3642780"
     CDS             1..282
                     /gene="Defa27"
                     /gene_synonym="Gm15299"
                     /note="novel defensin-related cryptidin; predicted
                     pseudogene 15299"
                     /codon_start=1
                     /product="uncharacterized protein LOC100041811 precursor"
                     /protein_id="NP_001164426.1"
                     /db_xref="GeneID:100041811"
                     /db_xref="MGI:MGI:3642780"
                     /translation="MKTLVLLSALALLASQVQADPIQNRDEESKIDEQPGKEDQAVSV
                     SFGDPEGSSLQEESLRDLICYCRTRGCKRRERLNGTCRKGHLMYTLCCR"
     exon            1..172
                     /gene="Defa27"
                     /gene_synonym="Gm15299"
                     /inference="alignment:Splign:2.1.0"
     exon            173..282
                     /gene="Defa27"
                     /gene_synonym="Gm15299"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagacac tagtcctcct ctctgccctt gccctgctgg cctcccaagt ccaggctgat
       61 cctatccaaa acagagatga agagagtaaa attgatgagc agccagggaa agaagaccaa
      121 gctgtttctg tctcctttgg agacccagaa ggctcttctc ttcaagagga atcgttgaga
      181 gatctgatat gctattgtag aacaagaggc tgcaaaagaa gagaacgcct gaatgggacc
      241 tgcagaaagg gtcatttaat gtacacgctc tgctgccgct ga
//
