LOCUS       XM_030242784            2317 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus DEAF1, transcription factor (Deaf1),
            transcript variant X6, mRNA.
ACCESSION   XM_030242784
VERSION     XM_030242784.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030242784.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2317
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..2317
                     /gene="Deaf1"
                     /gene_synonym="C230009B13Rik; NUDR"
                     /note="DEAF1, transcription factor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 27
                     ESTs, 785 long SRA reads, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 44 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:54006"
                     /db_xref="MGI:MGI:1858496"
     CDS             545..1987
                     /gene="Deaf1"
                     /gene_synonym="C230009B13Rik; NUDR"
                     /codon_start=1
                     /product="deformed epidermal autoregulatory factor 1
                     homolog isoform X5"
                     /protein_id="XP_030098644.1"
                     /db_xref="GeneID:54006"
                     /db_xref="MGI:MGI:1858496"
                     /translation="MGLAASLQREKEVTTVTVANVGSSADNVFTTSVANAASISGHVL
                     SGRTALQIGDSLNTEKATLIVVHTDGSIVETTGLKGPAAPLTPGPQSPPTPLAPGQEK
                     GGTKYNWDPSVYDSELPVRCRNISGTLYKSRLGSGGRGRCIKQGENWYSPTEFEAMAG
                     RASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDDMTLSGPVRLFVPYKRR
                     KKENELPTTPVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRASTVEATAVI
                     SESPAQGDVFAGATVQEAGVQPPCRVGHPEPHYPGYQDSCQIAPFPEAALPTSHPKIV
                     LTSLPALAVPPSTPTKAVSPTVVSGLEMSEHRSWLYLEEMVNSLLNTAQQLKTLFEQA
                     KQASSCREAAVTQARMQVDTERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKD
                     HQHVCGQSASVTVQADDVHVEESVIEKVAV"
ORIGIN      
        1 gggcggcctc ggcccaactc gggcggcctc ttcgggcccc gcttcgggct cggtgcctgg
       61 cgcttcgggc ggtcccggac agcgccttcg ggcggactcg gtggagtccg tatggaggac
      121 tcggactcgg cggcaaaaca gctgggcctg gccgaggcgg cagctgtggc ggccgctgcc
      181 gcggtggcgg cggccgccgc ggccgcagcg gaaagcgagg cggaggagcc ggtgttaagc
      241 agagacgagg actcggagga ggacgcagac tccgaggcgg agcgcgagac gcggcgggtc
      301 accgctgtgg cggtgatggc ggccgaatct gggcacatgg atatgggtac cgaggctctg
      361 cccagccccg atgaggccgc cgccgccgcc gccgccttcg caggaggaag agtttctggg
      421 gaaggatgtc atggagacct cagacagtgg acacaagact gtaggatggc ctgagctatg
      481 gcagtggaga gggatgaggc tggagtctgc catgtcttga tcgacaagga ggtgtcctag
      541 acctatggga cttgcagctt ctttgcaaag ggagaaagaa gtgaccacag tgactgtggc
      601 caacgtgggg tcctctgcag ataacgtctt cacaacatca gtggcaaacg cagcatcgat
      661 atcaggacat gtcctgtctg gtaggacagc cctgcagatc ggtgacagcc tgaacactga
      721 aaaagccaca ctaatagttg tacacacaga tgggagcatt gtggagacca ctgggctgaa
      781 gggcccagca gcacctctca ctccaggtcc ccagtctcct cctaccccac tggcacctgg
      841 ccaggagaaa ggtggtacca agtacaactg ggacccttcg gtgtatgaca gcgagttgcc
      901 tgtgcgctgt cggaacatca gtggcacgct ctacaagagt aggctcggct caggtggccg
      961 gggccggtgt atcaagcagg gagaaaactg gtacagccca actgagtttg aagctatggc
     1021 aggaagagcc agcagcaagg actggaagag aagcatccgc tatgctggca gacccctgca
     1081 gtgcctcatt caggatggta ttttgaaccc tcacgctgcc tcctgtacct gtgccgcctg
     1141 ttgtgatgac atgactctga gtggccctgt caggctcttc gtcccttata aaaggcgcaa
     1201 gaaagagaat gagctgccca caactccagt gaagaaggat tcccccaaga acatcaccct
     1261 gcttcctgcc acggcggcca ccaccttcac tgtgacaccc tcaggacaga tcactacctc
     1321 tggagcactg acctttgaca gagcatccac tgtagaggcc actgctgtca tctctgagag
     1381 cccagcccaa ggtgatgtct ttgcaggagc cacagtgcaa gaggcaggtg tgcagcctcc
     1441 ctgcagggtt ggccaccctg aaccccacta ccctggctat caggacagct gccagattgc
     1501 cccgtttcca gaagctgcat tgccaacatc acaccccaaa attgtcctga catcgctgcc
     1561 cgcattggcc gtgccaccgt ccacccccac caaagctgtc tctcccaccg tggtcagtgg
     1621 gctggagatg tcagaacatc ggagctggct gtacctggaa gagatggtca actccctact
     1681 caacacagct cagcagctga agacgctgtt tgaacaagcc aagcaggcga gctcttgcag
     1741 ggaagctgct gtgacccagg cgagaatgca ggttgataca gagaggaaag agcagtcatg
     1801 tgtcaactgc ggccgggagg ccatgagtga gtgtaccggc tgccacaagg ttaactactg
     1861 ctctacgttc tgccagcgca aggactggaa agaccatcag catgtgtgtg gccagtcagc
     1921 gtctgtcact gtccaggctg atgacgtcca tgttgaagaa agtgtgatag aaaaagttgc
     1981 tgtttgagcc aggcttctcc ttgagctctg ctgtgaagcc atcgcaggct taggccctct
     2041 gatgactgtg ggggctgctg agaagagggg ccatgggaaa cttgccggac aagttattaa
     2101 cagattgtgc ccttggaaac aagctccttc cagagaccaa ggaacgctgg cagctttcag
     2161 aatggggcac tctgctacag cccagggccc tcagcctatc acggtgctct ttcatccctg
     2221 gatcatgagt gtcccactac ccttggggtg ccctatgcca cgtgtacata cctgtcttat
     2281 ctgttaataa acatgtaaat aaaactccca ccccata
//
