LOCUS       XM_006536213            2318 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus DEAF1, transcription factor (Deaf1),
            transcript variant X15, mRNA.
ACCESSION   XM_006536213
VERSION     XM_006536213.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..2318
                     /gene="Deaf1"
                     /gene_synonym="C230009B13Rik; NUDR"
                     /note="DEAF1, transcription factor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 20 ESTs, 465 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 35 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:54006"
                     /db_xref="MGI:MGI:1858496"
     CDS             1056..1988
                     /gene="Deaf1"
                     /gene_synonym="C230009B13Rik; NUDR"
                     /codon_start=1
                     /product="deformed epidermal autoregulatory factor 1
                     homolog isoform X10"
                     /protein_id="XP_006536276.1"
                     /db_xref="GeneID:54006"
                     /db_xref="MGI:MGI:1858496"
                     /translation="MSRLCACLAAVLFMDFFRKCLLYHSEGSCGRLLSAVSGPVRLFV
                     PYKRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRASTVE
                     ATAVISESPAQGDVFAGATVQEAGVQPPCRVGHPEPHYPGYQDSCQIAPFPEAALPTS
                     HPKIVLTSLPALAVPPSTPTKAVSPTVVSGLEMSEHRSWLYLEEMVNSLLNTAQQLKT
                     LFEQAKQASSCREAAVTQARMQVDTERKESCVNCGREAMSECTGCHKVNYCSTFCQRK
                     DWKDHQHVCGQSASVTVQADDVHVEESVIEKVAV"
ORIGIN      
        1 ggtggcttcg ggcggcctcg gcccaactcg ggcggcctct tcgggccccg cttcgggctc
       61 ggtgcctggc gcttcgggcg gtcccggaca gcgccttcgg gcggactcgg tggagtccgt
      121 atggaggact cggactcggc ggcaaaacag ctgggcctgg ccgaggcggc agctgtggcg
      181 gccgctgccg cggtggcggc ggccgccgcg gccgcagcgg aaagcgaggc ggaggagccg
      241 gtgttaagca gagacgagga ctcggaggag gacgcagact ccgaggcgga gcgcgagacg
      301 cggcgggtca ccgctgtggc ggtgatggcg gccgaatctg ggcacatgga tatgggtacc
      361 gaggctctgc ccagccccga tgaggccgcc gccgccgccg ccgccttcgc agaagtgacc
      421 acagtgactg tggccaacgt ggggtcctct gcagataacg tcttcacaac atcagtggca
      481 aacgcagcat cgatatcagg acatgtcctg tctggtagga cagccctgca gatcggtgac
      541 agcctgaaca ctgaaaaagc cacactaata gttgtacaca cagatgggag cattgtggag
      601 accactgggc tgaagggccc agcagcacct ctcactccag gtccccagtc tcctcctacc
      661 ccactggcac ctggccagga gaaaggtggt accaagtaca actgggaccc ttcggtgtat
      721 gacagcgagt tgcctgtgcg ctgtcggaac atcagtggca cgctctacaa gagtaggctc
      781 ggctcaggtg gccggggccg gtgtatcaag cagggagaaa actggtacag cccaactgag
      841 tttgaagcta tggcaggaag agccagcagc aaggactgga agagaagcat ccgctatgct
      901 ggcagacccc tgcagtgcct cattcaggat ggtattttga accctcacgc tgcctcctgt
      961 acctgtgccg cctgttgtga tgacatgact ctggctgggg tttccttgtt ctccttccct
     1021 tggcccactt cccttctacg aatctaaagc tccagatgtc gaggctgtgt gcttgcctgg
     1081 cagcagtgct cttcatggat ttcttcagaa aatgtcttct ctaccattct gagggctcct
     1141 gtggacgtct gctctctgca gtaagtggcc ctgtcaggct cttcgtccct tataaaaggc
     1201 gcaagaaaga gaatgagctg cccacaactc cagtgaagaa ggattccccc aagaacatca
     1261 ccctgcttcc tgccacggcg gccaccacct tcactgtgac accctcagga cagatcacta
     1321 cctctggagc actgaccttt gacagagcat ccactgtaga ggccactgct gtcatctctg
     1381 agagcccagc ccaaggtgat gtctttgcag gagccacagt gcaagaggca ggtgtgcagc
     1441 ctccctgcag ggttggccac cctgaacccc actaccctgg ctatcaggac agctgccaga
     1501 ttgccccgtt tccagaagct gcattgccaa catcacaccc caaaattgtc ctgacatcgc
     1561 tgcccgcatt ggccgtgcca ccgtccaccc ccaccaaagc tgtctctccc accgtggtca
     1621 gtgggctgga gatgtcagaa catcggagct ggctgtacct ggaagagatg gtcaactccc
     1681 tactcaacac agctcagcag ctgaagacgc tgtttgaaca agccaagcag gcgagctctt
     1741 gcagggaagc tgctgtgacc caggcgagaa tgcaggttga tacagagagg aaagagtcat
     1801 gtgtcaactg cggccgggag gccatgagtg agtgtaccgg ctgccacaag gttaactact
     1861 gctctacgtt ctgccagcgc aaggactgga aagaccatca gcatgtgtgt ggccagtcag
     1921 cgtctgtcac tgtccaggct gatgacgtcc atgttgaaga aagtgtgata gaaaaagttg
     1981 ctgtttgagc caggcttctc cttgagctct gctgtgaagc catcgcaggc ttaggccctc
     2041 tgatgactgt gggggctgct gagaagaggg gccatgggaa acttgccgga caagttatta
     2101 acagattgtg cccttggaaa caagctcctt ccagagacca aggaacgctg gcagctttca
     2161 gaatggggca ctctgctaca gcccagggcc ctcagcctat cacggtgctc tttcatccct
     2221 ggatcatgag tgtcccacta cccttggggt gccctatgcc acgtgtacat acctgtctta
     2281 tctgttaata aacatgtaaa taaaactccc accccata
//
