LOCUS       XM_036153913            4597 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus DExD/H box helicase 60 (Ddx60), transcript
            variant X2, mRNA.
ACCESSION   XM_036153913
VERSION     XM_036153913.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4597
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..4597
                     /gene="Ddx60"
                     /gene_synonym="9830118M07"
                     /note="DExD/H box helicase 60; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 27 ESTs, 18 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:234311"
                     /db_xref="MGI:MGI:2384570"
     CDS             110..4030
                     /gene="Ddx60"
                     /gene_synonym="9830118M07"
                     /codon_start=1
                     /product="probable ATP-dependent RNA helicase DDX60
                     isoform X2"
                     /protein_id="XP_036009806.1"
                     /db_xref="GeneID:234311"
                     /db_xref="MGI:MGI:2384570"
                     /translation="MNEYVHLWDTVSKLVRKFDVGKPIPLRTTKVHFLEKTPSPIKES
                     SQEMMPNLGFIPMSCNLVDEFTGDILKDLPFLMSDDPIVTSLVKHKEFDELVHWHSHR
                     PLSDDYDRTKVNSGDRRDPNHLKRLQKYHSFQRFYGESLESVTSKTITTQGPKPKKDC
                     IKSKSTKAHETKAEIIKRENKKRLIAEEEQKEEQKWNALSFSIEEEMRKNVDSGMKKL
                     EEFLKSCKSRSVKAQVERVGLQACLKAWKEHCQAEGETTKDLSIAVNMMKRIHSLLDK
                     HSELLQEADQKLIARCLKYLGFCELAVSLYPTQDASDGIKMKKKNKYSVGIGPARFQL
                     QYMGHYLIREERKDPDPRVQDFIPDTWQRELLDVVDNYESAVIVAPTSSGKTYASYYC
                     MEKVLKESDEGVVVYVAPTKALVNQVAATVEYRYAKNMPAGESLCGVFTRDYRHDALN
                     CQVLITVPACFEILLLAPHRQNWVKRIRYVIFDEVHCLGGEIGAEIWEHLLVMIRCPF
                     LALSATISNPQHLTEWLQSVKRYWKQVDSTMEERTVSKRTGTSRGSYYKDQAQARQSY
                     KVRLVLYGERYNDLEKYLCSVRQGDVCFDHFHPCAALTIDHIEKYGFPSDLALSPRES
                     IQLYDTMCQVWKSWPQAQSLCPENFTQFKNKIVIKKLDARKYEESLKEEFTNWVKNGN
                     EEEARMVLKKLSPDYHEHSGRMLDFFPCLVEKLRKMEKLPALFFLFKLNIVEECAENA
                     FEFLEKKQEEKRPPKADKEARTTANKLRKVKKSLEKQKTVDEKGQKSSRRLDESVMHE
                     TEHNYLLQTLEKNLEIPKDCTYANQKAIDDQLLQRVFHRVRFERKGETLKRLAERGIG
                     YHHSSMSAKEKQLVEILFRKGFIRVVTATGTLALGINMPCKSVVFAQNSVYLDALNYR
                     QMSGRAGRRGQDLLGDVYFFDIPLPKIGKLIKSKVPELRGQFPLSISLILRLMLLASK
                     ADDLEDGKAKALSVLKHSLLSFKQPRAIDMLKLYFLYSLQFLVKEGHIDQEGNPTGFA
                     GLVSHLHYHEPSNLVFVSFLVKGLFHKLCQPTREGPKRFSEDVMEKLVLVLANLFGRR
                     YIPAKFYEVNSKFYQSKVFLDDLPEDFSHALLEYNTQVTEDFASFLLMVSRLADMKQE
                     YQLSLSKIEFTGKECEDSPLVSHLMNCKEGRVAVSPFVCLSGNFDVDLLSPGVPNHVI
                     LHTLGINHTQAPVLWPYALDSQGRKIPLNAYALDFYKHGSLIGLVQDNRIHPGEAYSL
                     LKDFNLIIKSISVSLRELCENEEDNVVLAFEQLSTSFQEKFELV"
ORIGIN      
        1 atgtacctct ctctcagaga gctcgctcaa gattcatcac tgctaattgg attcaggacc
       61 tcaagactgt cctaaaaatg gcctggattt gaatgtggga gatgccatca tgaacgagta
      121 tgtacatctc tgggacactg tgtcaaagtt ggtcagaaag tttgatgtgg gaaaaccaat
      181 tcctttgaga acaacaaaag ttcattttct tgaaaagaca ccatcaccaa tcaaagaaag
      241 ttcccaggag atgatgccaa atttaggttt tattccaatg tcatgtaatt tagttgatga
      301 atttactgga gacattttga aagacttgcc tttcctaatg agtgatgacc ccattgttac
      361 gtcactggta aagcataagg aatttgatga gcttgtgcac tggcactccc acagacctct
      421 cagtgatgat tatgacagga caaaggtgaa ttctggagac agaagagacc ccaatcatct
      481 taaaaggttg cagaagtatc atagttttca acgattttat ggggagtcat tagaatcagt
      541 cacttcaaag accatcacaa ctcaaggtcc taagccaaag aaggattgta ttaagtccaa
      601 gagcacaaag gcacatgaga ccaaggctga aataattaaa agagaaaata agaagaggtt
      661 aattgctgag gaagaacaaa aagaagagca aaaatggaat gccctgtcat tttctatcga
      721 ggaggaaatg agaaagaatg tagactcagg aatgaagaaa ctggaagagt ttttgaaatc
      781 atgtaaaagt cgctcagtaa aagctcaggt tgaaagagtt gggttacagg cttgcttgaa
      841 agcctggaag gaacattgcc aggctgaagg tgaaaccacg aaagacttaa gcatagctgt
      901 caatatgatg aagaggatcc attccttgtt ggacaaacac tctgaacttc tgcaagaagc
      961 agatcagaaa ctcatagcca gatgtcttaa gtatttaggg ttttgtgagc tagcagtttc
     1021 tttatatcca actcaggatg catcagatgg cataaaaatg aagaaaaaga ataaatattc
     1081 agttgggatt gggccggctc ggttccaact acaatatatg ggtcattatt taatacgaga
     1141 agaaagaaaa gacccagacc ccagggtcca agattttatt cctgacacat ggcagcgaga
     1201 gctcctggat gtggtggata actatgagtc tgcagtaatt gttgccccaa catcatctgg
     1261 caagacttat gcttcctact attgcatgga aaaggtgctg aaagagagcg atgaaggcgt
     1321 ggttgtgtat gttgcaccaa caaaggctct tgttaatcaa gtggcagcaa ctgttgaata
     1381 tcgttatgcc aaaaatatgc cagctggtga atctctttgt ggtgttttta ccagggatta
     1441 tcgccatgat gccctcaact gtcaggtgct tataactgtt cctgcctgct ttgaaattct
     1501 gctactagct cctcatcgcc aaaattgggt gaagaggatc agatatgtta tatttgatga
     1561 ggtccattgc cttggtggag aaattggagc ggaaatctgg gagcatctcc ttgttatgat
     1621 ccgatgtccc tttttggccc tttcagctac cattagcaac cctcagcatc tcaccgagtg
     1681 gcttcagtca gtaaagcggt actggaagca agtagacagt accatggagg aaagaactgt
     1741 ttccaaaaga actggtacct cccgtggcag ctattacaaa gatcaagcgc aagccagaca
     1801 gtcctacaaa gttagacttg tgctctatgg agagagatac aatgacctag agaagtattt
     1861 gtgttccgtg agacagggcg atgtttgctt tgatcatttt cacccctgcg ctgcactaac
     1921 catagatcac attgaaaagt atggatttcc ttctgatctt gccctttcac cccgagaaag
     1981 catacagctg tatgacacta tgtgccaggt ctggaagagt tggccccagg cccagagcct
     2041 atgtccagag aacttcactc aatttaagaa taaaatagtc attaagaagt tggatgctag
     2101 aaaatatgaa gagagcttaa aggaagaatt cacgaattgg gttaaaaatg ggaacgagga
     2161 ggaggccagg atggtgctga agaaactgag ccctgattac catgagcact cagggaggat
     2221 gctggatttc tttccatgtc ttgttgagaa gctaaggaaa atggagaagt tgcctgcact
     2281 attcttttta tttaagttaa atattgtaga agaatgtgct gaaaatgctt tcgaatttct
     2341 ggagaaaaaa caggaagaaa aaagacctcc caaagctgac aaagaagctc gtaccacggc
     2401 taacaaactt cggaaagtta aaaaatctct ggagaaacaa aagacagtag atgaaaaggg
     2461 ccagaaatct tccagaagat tggatgaaag cgttatgcat gaaacagaac acaattacct
     2521 cctgcagact ctggagaaga atctggagat tcccaaggac tgcacatatg ctaatcagaa
     2581 ggcaatagat gatcagttat tgcagagggt gtttcaccgg gtgagattcg aacgtaaagg
     2641 tgaaacactg aagaggttgg cagaaagggg cattggctac caccacagtt ccatgagtgc
     2701 caaagaaaag cagttggtcg aaattctctt caggaaagga ttcatcaggg tggtgacagc
     2761 tactggaaca ctcgctttgg gaatcaacat gccctgtaaa tctgtggttt ttgcacaaaa
     2821 ctcagtctat ctggatgctt taaattacag acagatgtct ggtcgggctg gaagacgagg
     2881 gcaagacctg ttgggtgatg tctacttctt tgatattcca ctgcccaaaa taggaaaact
     2941 cataaaatcc aaagttcctg aacttagagg acagtttccc ctcagtattt cactcatcct
     3001 aagactcatg ttgctggctt ccaaggcgga tgacctagag gatggcaagg caaaggcact
     3061 gtcagtgctg aagcattcat tgttatcctt caaacaaccc cgagccatag acatgttaaa
     3121 gctttacttc ttatattctt tgcagttcct ggtgaaagag ggacatatag atcaagaagg
     3181 taatcctaca gggtttgctg gccttgtctc ccatttacat taccacgaac cttctaatct
     3241 cgtgtttgtc agttttcttg taaaaggcct tttccataaa ctttgtcagc caacaaggga
     3301 aggcccaaaa cgtttttctg aagatgtaat ggaaaagctg gttttggtat tggcaaatct
     3361 ttttggaaga agatatatcc cagccaagtt ctatgaggtt aactccaagt tttatcaatc
     3421 aaaggtgttc cttgatgacc ttcccgagga cttcagtcac gccctgcttg agtacaatac
     3481 gcaagtgaca gaagacttcg cttcctttct gctaatggta tcccgattgg ctgatatgaa
     3541 acaggagtat caactctcct tgtcaaaaat cgagttcaca ggtaaagaat gtgaagattc
     3601 gccacttgtg tctcacttga tgaactgcaa ggaaggaagg gtggcggttt caccctttgt
     3661 ttgtctgtct ggaaactttg atgtggattt gcttagtcca ggagttccaa atcatgtcat
     3721 tctacacaca cttggtatca atcacacaca agccccggtg ctgtggccat acgcattgga
     3781 tagtcaagga agaaaaattc cacttaatgc ctatgcactt gatttctata agcatggatc
     3841 ccttattgga ttagtccagg acaataggat acatccaggg gaagcttata gcctgttgaa
     3901 agattttaat cttatcatta agtctatcag tgtctccttg cgtgaactgt gtgaaaatga
     3961 agaagacaat gttgttttag catttgaaca attgtctacg tcttttcaag agaagtttga
     4021 attagtgtga aaagaaaaac tatgtaaact gcttaaacta tcaccataga atcattgtga
     4081 attatatatc tttactctta tgtcttactc aaacaatcat acatgatgag atggaatgaa
     4141 taagcaaata gagttgccat caaacttctt gtggttgcct ctaatgtact tggtggtttc
     4201 tcaaaaagtt gacaaaaatg cttatatttc taaattattg aggattgaag gaaaaaaaat
     4261 acaagaatat tacatatata catttaaaga cagtttttac actccatgag acccaatcaa
     4321 atattgcatt ttacatattt tcactgttag tatgtctaaa actacttttg aagatagaaa
     4381 aaaatgattt tagtatcctg aaagtgtaat ataatctata caatcaacat aaagggattt
     4441 cactgcttag atagctagtt aatgaaataa tacctcttga tataatatga aatgtaaaat
     4501 atgtatattt tcattgaatt tttgtgatgc ttttaaagaa aacatgtagc taatattttt
     4561 cttcatttta attgtatata aatgactgtt gaaataa
//
