LOCUS       XM_030245181            4591 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus DExD box helicase 21 (Ddx21), transcript
            variant X1, mRNA.
ACCESSION   XM_030245181
VERSION     XM_030245181.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4591
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..4591
                     /gene="Ddx21"
                     /gene_synonym="D10Ertd645e; D10Wsu42e"
                     /note="DExD box helicase 21; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 68 ESTs, 1796 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 33 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:56200"
                     /db_xref="MGI:MGI:1860494"
     CDS             1298..2488
                     /gene="Ddx21"
                     /gene_synonym="D10Ertd645e; D10Wsu42e"
                     /codon_start=1
                     /product="nucleolar RNA helicase 2 isoform X1"
                     /protein_id="XP_030101041.1"
                     /db_xref="GeneID:56200"
                     /db_xref="MGI:MGI:1860494"
                     /translation="MLSWMKSTRCWIWVLLIKWKKFYVLHTRKHLAIKCHWTERAAVI
                     GDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRN
                     GNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQN
                     KEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKL
                     IEEKGAVEALAAALAHISGATSVDQRSLINSQAGFVTMILRCSIEMPNISYAWKELKE
                     QLGESIDAKVKGMVFLKGKLGVCFDVRTEAVTEIQEKWHDSRRWQLTVATEQPELEGP
                     PDGYRGRMGQRDGSRGAFRGQRGGSRNFRGQGQRGGSRNFRGQRPGGGNRGQKRSFSK
                     AFGQ"
ORIGIN      
        1 cggtccgctt tctctgtcgc cctctctcct agcacgcggt tgaggaagcc ggtaggcctg
       61 agaagctgct gctgaataat gccgggaaaa ctccgcagtg gggccaagtt gggctcagac
      121 ggggccgagg agagcatgga gacgctgccg aagccaagcg agaagaaaac tagaaaagag
      181 aagacaaaat caaagaccga agaagcaaca gaaggaatgg aagaggccgt ttcctccaaa
      241 gcaaagaaaa caaacaagaa agggccttct gaggatgatg tggatccccc taaatccagg
      301 aaggccaaga agcaggagga ggagcctcaa gacgacactg cttctacaag caaaacctcc
      361 aagaagaaaa aggagcccct tgagaagcaa gcagactctg aaaccaaaga gataataaca
      421 gaggagcctt ccgaagaaga ggcagacatg cctaagccca agaagatgaa gaaagggaaa
      481 gaagcaaacg gagatgccgg agagaaaagc cccaagctga agaatggact ctcccaacct
      541 tccgaagaag aggcagacat tcctaagccc aagaagatga agaaagggaa agaagcaaac
      601 ggagatgctg gagagaaaag ccccaagctg aagaatggac tctcccaacc ttccgaagaa
      661 gaggtagaca ttcctaagcc caagaagatg aagaaaggga aagaagcaag cggagatgcg
      721 ggagagaaaa gccccaggct gaaggatgga ctctcccaac cttctgaacc gaaatccaac
      781 tccagtgatg ctcctggtga ggaaagtagt agcgagacag aaaaggaaat acctgtggag
      841 cagaaagagg gagctttctc taattttccc atttctgaag agactgtcaa gcttctcaaa
      901 gctcgtgggg tgaacttcct gtttcctata caagccaaga cctttcatca tgtgtacagt
      961 gggaaagact taattgccca ggcacggaca ggaaccggaa agacattctc ttttgccatc
     1021 cctttaattg agaaacttca aggtgggcta caagagagga agagaggccg agcccctcag
     1081 gtgctagtcc ttgcacccac aagagaatta gcaaatcaag tgagcaaaga cttcagcgac
     1141 atcaccaaaa agctctctgt agcttgtttt tatggtggaa caccctacgg tggtcagatt
     1201 gaacgaatgc ggagtgggat tgatatcctg gttgggaccc caggtcgtat taaagaccac
     1261 ttgcagaatg gcaagctaga tctcaccaaa cttaaacatg ttgtcctgga tgaagtcgac
     1321 cagatgttgg atatgggttt tgctgatcaa gtggaagaaa ttttatgtgt tgcatacaag
     1381 aaagcacctg gcgattaagt gtcactggac agaaagggca gcggtgattg gggatgtgat
     1441 ccgagtgtac agtggtcatc aagggcgcac gatcatcttc tgtgaaacca agaaggatgc
     1501 ccaggagcta tctcagaaca cgtgcataaa gcaggatgcc cagtccttac atggcgacat
     1561 tccacagaag caaagggaaa tcaccctgaa aggtttccga aatggcaatt ttggagtttt
     1621 ggtggcaacc aatgttgctg cccgtgggtt agacatccct gaggttgact tggttgttca
     1681 gagctgccca ccaaaggatg tggagtctta cattcatcgt tcggggcgga caggcagagc
     1741 tggaaggaca ggagtttgca tctgctttta ccagaacaaa gaagagtacc agttagcaca
     1801 agtggagcag aaagcgggaa ttaaatttaa acggataggt gttccttctg caacggaaat
     1861 aataaaagcc tccagcaaag acgccatcag gctcttggat tctgtgcctc ccactgccat
     1921 tagccatttc aagcagtcag ctgagaagct gattgaggag aagggagctg tagaggcctt
     1981 ggcagctgct ctggcccaca tctcaggagc cacatcagtc gatcagcgct ccctgatcaa
     2041 ctcgcaagca ggctttgtga ccatgatcct gcggtgctcc attgagatgc ccaacatcag
     2101 ttacgcttgg aaagaactta aggagcagct gggcgagagc atcgatgcca aagtgaaggg
     2161 aatggtcttc ctcaaaggaa aactgggggt ttgttttgat gtccgaactg aagcagtcac
     2221 agaaatacag gagaagtggc atgattcgag acgctggcag ctcaccgtgg ccaccgagca
     2281 gccagagctg gagggacctc cagacggata tcgaggccgc atgggtcagc gtgatggcag
     2341 ccgtggtgct ttcagaggac agcggggtgg aagcaggaac ttccggggac agggacagcg
     2401 aggaggaagt agaaacttcc gaggacagcg accaggaggt ggcaacagag gccagaagcg
     2461 gagttttagt aaagcgtttg gtcagtgagt agaggccaga agggactgtt cccactgtgg
     2521 accccagggt ccaccctgct gacaaagccc gagtgcttcc ttcctttttt taccacttct
     2581 cagcgccccc tttcttgcag agaggcttct gaactgtcca ctaaccatca caaattcttc
     2641 attttgaaaa aggataagaa ttcattgcat cgttttccaa catactttta gatttacaaa
     2701 gtaaaaccaa ccatggatct gcctatcttg gtgtgtcgat cttgtaattt tatctttgtg
     2761 tgtgtgtgtg tgtgtgtgtg tgcactcact ggggcctaag ctcagaacct cacacaggca
     2821 gagtatacac acgccctgca actaaactgc atctctagtc cctatacatg tgtcctactc
     2881 atccttcaaa gtgagtccct aggggatgcc tcagtctctg gaggattgca agagccaggg
     2941 cggaatgtgt ttgtttgcat tccttggcat cctggactct tgcaaacaat tgctgtgttc
     3001 atatgtgtct gctgaggttt gatgctgagc agagcttttc aagagccgct tcagacttag
     3061 ctgattgaat agtttgtgcc cggctctggg tgttgagcgt agaacagaca gcagattcac
     3121 tccagtgtct tcacacactc attaggtgtt ttctgttcca gtgaagtctc cagacaaggg
     3181 tatatagaaa gacattttta taggacccag tgtaaagttc aggcccaaat gcctaacatg
     3241 tctaggtgtt tttgtcagta atgagactgg ataaatggta tgtaagtgct tgcaccccac
     3301 ttttggaaga ttaatttacc aagaagcatg gggttcagtt ggtgttgctg acaaatatct
     3361 caaaaaagcc acaaaggtgt ctttgatcgt gacaggtgag gaggtggaga agcgtgcttt
     3421 gagtggtgag caggtcctga ctcgtggctc ctggaggggc tgtgtctgct agtgtgcagt
     3481 ctggggctgt taaaggggca cagtgggaca ggcttgtttt cagtggctta gatcttaaac
     3541 cacaacgtaa aatctatttc tgttaagcag cttctctgaa aaattatcac agctcagaga
     3601 gcccttctat gacaagctgt gccattttaa gctcttactt tgagggaact gaagcatagc
     3661 ccctgcctac tgctggtgtt ctttatttgg gaatcatccc gcctagcaca gaagcttgag
     3721 tggtggggtc ctctagctgt actagagatt ctgcgcaggg ctcttagaac aggcttggga
     3781 ggaaagtcag aaccacgcac tgtcattttg gttttttttt aatttttctt aattgtttgg
     3841 atcaactaag accttcattt tagtatggtc cttacctcct aactggcctt tacctggcat
     3901 taaagggctc tgataaccaa tcagctcccg gtagctgaag cagtgccctt ttttctattt
     3961 aaattcagtt ttccccttga actctgacca gatggctcat cctctgtgct caggatttgt
     4021 tgggttttgt ttttcttgtt ttctttgttg ataactgtag cttgtaagaa atgtgggcat
     4081 ggtttaatga agcatgtcac tgttgggata aaagagtttg ccagttcaag atgatgaaag
     4141 gacatactgg ctctgcttgc aggaggaaag gctaaaagac attttgaatt aatgggttac
     4201 cctatagaaa aatgatctgt cataaaccaa acagtgaagg ggaagaaggg aagaattcca
     4261 attgacacaa tttaaatgaa acatgacttt tcaaacaaat gaagtttctt ttggattgca
     4321 gaaactaagc aatatttata tgtataattc aactattatt tggtttaaat gggcttgttg
     4381 ggaaatgtta tcatttttac tattttctac agagaaaata ttttccactt tatcaaataa
     4441 atctggactt tgaaattaca gcctgttttt atgttccagc tgtctatgta tgttttcctg
     4501 aaactgtaca taaaatgttt ttacattaaa atgaattgct gtataaagta ctgcattatg
     4561 ccataataaa gataccgatg ctttatattt a
//
