LOCUS       NM_025600               1937 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus DET1 and DDB1 associated 1 (Dda1), transcript variant
            1, mRNA.
ACCESSION   NM_025600 XM_001476732 XM_912953
VERSION     NM_025600.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Cheng,L., Yang,Q., Li,C., Dai,L., Yang,Y., Wang,Q., Ding,Y.,
            Zhang,J., Liu,L., Zhang,S., Fan,P., Hu,X., Xiang,R., Yu,D., Wei,Y.
            and Deng,H.
  TITLE     DDA1, a novel oncogene, promotes lung cancer progression through
            regulation of cell cycle
  JOURNAL   J Cell Mol Med 21 (8), 1532-1544 (2017)
   PUBMED   28211159
  REMARK    GeneRIF: The results indicate that DDA1 promotes lung cancer
            progression, potentially through promoting cyclins and cell cycle
            progression.
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Li,H., Bishop,K.M. and O'Leary,D.D.
  TITLE     Potential target genes of EMX2 include Odz/Ten-M and other gene
            families with implications for cortical patterning
  JOURNAL   Mol Cell Neurosci 33 (2), 136-149 (2006)
   PUBMED   16919471
REFERENCE   3  (bases 1 to 1937)
  AUTHORS   Taniwaki,T., Haruna,K., Nakamura,H., Sekimoto,T., Oike,Y.,
            Imaizumi,T., Saito,F., Muta,M., Soejima,Y., Utoh,A., Nakagata,N.,
            Araki,M., Yamamura,K. and Araki,K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   4  (bases 1 to 1937)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   5  (bases 1 to 1937)
  AUTHORS   Araki,K., Imaizumi,T., Sekimoto,T., Yoshinobu,K., Yoshimuta,J.,
            Akizuki,M., Miura,K., Araki,M. and Yamamura,K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY316490.1, BB610194.1, AK032966.1 and AC127416.7.
            
            On Jun 27, 2014 this sequence version replaced NM_025600.1.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longest isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK032966.1, BC034701.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-42                BY316490.1         1-42
            43-492              BB610194.1         36-485
            493-1683            AK032966.1         451-1641
            1684-1684           AC127416.7         138438-138438
            1685-1937           AK032966.1         1642-1894
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 34.43 cM"
     gene            1..1937
                     /gene="Dda1"
                     /gene_synonym="1500034J01Rik; 1700095J19Rik"
                     /note="DET1 and DDB1 associated 1"
                     /db_xref="GeneID:66498"
                     /db_xref="MGI:MGI:1913748"
     exon            1..132
                     /gene="Dda1"
                     /gene_synonym="1500034J01Rik; 1700095J19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..438
                     /gene="Dda1"
                     /gene_synonym="1500034J01Rik; 1700095J19Rik"
                     /note="isoform 1 is encoded by transcript variant 1; DET1-
                     and DDB1-associated protein 1"
                     /codon_start=1
                     /product="DET1- and DDB1-associated protein 1 isoform 1"
                     /protein_id="NP_079876.1"
                     /db_xref="CCDS:CCDS52584.1"
                     /db_xref="GeneID:66498"
                     /db_xref="MGI:MGI:1913748"
                     /translation="MADFLKGLPVYNKSNFSRFHADSVCKASNRRPSVYLPTREYPSE
                     QIIVTEKTNILLRYLHQQWDKKNAAKKRDQEQVEAEGESSAPPRKVARTDSPDMPEDT
                     "
     exon            133..213
                     /gene="Dda1"
                     /gene_synonym="1500034J01Rik; 1700095J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            214..265
                     /gene="Dda1"
                     /gene_synonym="1500034J01Rik; 1700095J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            266..327
                     /gene="Dda1"
                     /gene_synonym="1500034J01Rik; 1700095J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            328..1937
                     /gene="Dda1"
                     /gene_synonym="1500034J01Rik; 1700095J19Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      909..914
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dda1"
                     /gene_synonym="1500034J01Rik; 1700095J19Rik"
                     /note="hexamer: AATAAA"
     polyA_site      932
                     /gene="Dda1"
                     /gene_synonym="1500034J01Rik; 1700095J19Rik"
                     /note="major polyA site"
     regulatory      1911..1916
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dda1"
                     /gene_synonym="1500034J01Rik; 1700095J19Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1931
                     /gene="Dda1"
                     /gene_synonym="1500034J01Rik; 1700095J19Rik"
                     /note="major polyA site"
ORIGIN      
        1 gcggtgctgt cgccatcgga gtgagctgcg cggcggctgg aagtggctgt gcggcggcta
       61 ctgggaagga ggctgcggct gcggcggcgg cggcggcggc ggcggtccgg gtggcagaag
      121 acgcggacga tggcagactt tctgaaaggc ttgcccgtct acaacaagag caacttcagc
      181 aggttccacg cggactctgt gtgcaaggcc tcgaaccgcc gtccctcagt atacctgccg
      241 acccgagagt acccgtcaga acagatcatt gtgacagaaa agacgaacat acttctgcgg
      301 tacctgcacc agcaatggga taaaaagaat gctgccaaga agagagacca agagcaggtg
      361 gaggcggagg gcgagagctc agcgccacct cgcaaggtgg cccggaccga cagccccgac
      421 atgccggagg acacctaggt cctgtgcatc tcccctcatc tgtcagctct gtccactccc
      481 acccgcgtgt gtaagcgcgg cccgcctcct acatccagcc cgcgccctcc aaccgcatag
      541 gatccatgta tttattttcc ttgagttttt atttatgctg taactcgtgt caagcattgg
      601 ttaaagggac accaggccca gccgcgaggt atcagtacat gctttttaaa gcacagtggt
      661 gccccccacc cggccaccca cagcgagacc tcgccagagt ctagagccca gggcgggctg
      721 gtcccccaac acaccgagcg gcctttcgct ccttcctacc cacaggcctg gccggattgc
      781 aggtcctccg ggtcctcctg tgcccaggcc tcactctgag cccgtgccag ggcaggaaag
      841 agctggctcc tctggatctt tcttttacat catttatcat ggactagccc gtgctccacg
      901 tccaccccaa taaaaggacc tttcctactc cacacggcgt ctttgctccg caaactttgg
      961 ccggagccac tgggacctgt aggaaccaac ccctgcctgg ggtccttggg gccaggtccc
     1021 ctgggagact gagcccagga tagtaccacg gggctaacca acagccaccc accactgggt
     1081 atcatgtgca aggcccgcca acctccagca ctggtatcca tctggccact cgagaacatt
     1141 gcagggctga ggtggccaca ttatcattgg gatatggggg aactacctgg actggtagag
     1201 tggctgtgca ccctcagctg tagcatggta ctcactgcaa ggatggggtt ctgaggaccc
     1261 tgcatacttg tgaaggctaa cggtgtctgt gttcactggg ggccattatt atttggctgt
     1321 ggccctactg acctgggcct ggtatggccc tagtagcatc tcagcctcat gctgtgactt
     1381 ggcaactgcc gccgtgccct attaaaccct gggatgccct ggccagaatc ctccacggta
     1441 ccgttcctgg agctgctccc tgtgtctgcc tctgaaggcc tctccccttt cagatacagg
     1501 cagaagtttc tcccactctc aggtcttggt ctgaattcca actgccttcc tatgattgcc
     1561 ttttgctgtg ctactactgt gcattcttgg gagtcacctg gaccacccag gttcctgcag
     1621 gtgggccata tgacctgagt ctaggctcag caggctgctc ccggtgcaga acctctgtcc
     1681 tgggcacccc tatgagtgaa ccatgtcaca tctggctgag gtgtggagtg ccatgtgtat
     1741 ctggacccag accagagagg acctggacct cctagaggcc tcattctggg agaactaggg
     1801 tgctcagcct ccagccacgg atctggcaag gccccttcac tgctctgacc tcgagcactg
     1861 ttgaaataga cattttattg catttctgcc gttttacaaa aatatgacaa aataaattaa
     1921 aaacaaataa ataaccg
//
