LOCUS       NM_001190734            4078 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus defective in cullin neddylation 1 domain containing 4
            (Dcun1d4), transcript variant A, mRNA.
ACCESSION   NM_001190734
VERSION     NM_001190734.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4078)
  AUTHORS   Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K,
            Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre
            A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt
            AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A,
            Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S,
            Wohnoutka P, Hawrylycz MJ, Puelles L and Jones AR.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   2  (bases 1 to 4078)
  AUTHORS   Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND and Robson P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   3  (bases 1 to 4078)
  AUTHORS   Willnow T, Antignac C, Brandli A, Christensen E, Cox R, Davidson D,
            Davies J, Devuyst O, Eichele G, Hastie N, Verroust P, Schedl A and
            Meij I.
  TITLE     The European renal genome project: an integrated approach towards
            understanding the genetics of kidney development and disease
  JOURNAL   Organogenesis 2 (2), 42-47 (2005)
   PUBMED   19521566
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK076991.1, AK033559.1, AC140429.2 and AW047598.1.
            
            [WARNING] On Nov 27, 2023 this sequence was replaced by
            NM_001190734.2.
            
            Transcript Variant: This variant (A) encodes the longest isoform
            (A).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK076991.1, SRR5189685.58095.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1257              AK076991.1         2-1258
            1258-3138           AK033559.1         1268-3148
            3139-3139           AC140429.2         32962-32962
            3140-4054           AK033559.1         3150-4064
            4055-4078           AW047598.1         1-24                c
FEATURES             Location/Qualifiers
     source          1..4078
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 38.85 cM"
     gene            1..4078
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /note="defective in cullin neddylation 1 domain containing
                     4"
                     /db_xref="GeneID:100737"
                     /db_xref="MGI:MGI:2140972"
     exon            1..40
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
     CDS             35..955
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /note="isoform A is encoded by transcript variant A;
                     DCN1-like protein 4; DCUN1 domain-containing protein 4;
                     defective in cullin neddylation protein 1-like protein 4;
                     DCN1, defective in cullin neddylation 1, domain containing
                     4"
                     /codon_start=1
                     /product="DCN1-like protein 4 isoform A"
                     /protein_id="NP_001177663.1"
                     /db_xref="CCDS:CCDS57349.1"
                     /db_xref="GeneID:100737"
                     /db_xref="MGI:MGI:2140972"
                     /translation="MEFTQEQQACRPQRSEEMRHWKDFQLNSHLSTLASIHKIYHTLN
                     KLNLTEDVGQDDHQTGSLRSCSSSDCFSKVMPPRKKRRPASGDDLSAKKSRHDSMYRK
                     YESTRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAW
                     KLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFA
                     REKDQRSLDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTI
                     SLDLSNYDEDGAWPVLLDEFVEWYKDKQMS"
     exon            41..101
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
     exon            102..172
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
     exon            173..212
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
     exon            213..327
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
     exon            328..419
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
     exon            420..490
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
     exon            491..582
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
     exon            583..691
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
     exon            692..796
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
     exon            797..899
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
     exon            900..4062
                     /gene="Dcun1d4"
                     /gene_synonym="DCNL4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgacgctgg gcagccttgg tcaagcaaga cctcatggag tttacccaag agcagcaagc
       61 ctgtcgtcca caacggtctg aggaaatgag acattggaaa gactttcagc tgaactctca
      121 tctctcaaca ctggcaagca ttcataagat ctaccatacc cttaacaagc tgaatctgac
      181 agaagacgtt ggccaagacg atcaccaaac aggaagcctg cgctcttgca gttcttcgga
      241 ctgctttagc aaagtgatgc cacccaggaa aaagagaaga cctgcctctg gagacgactt
      301 atctgcaaaa aaaagcaggc atgacagcat gtataggaaa tacgagtcaa ctagaataaa
      361 gactgaagaa gaggctttct ccagtaagcg gtgcctggag tggttttatg aatatgcagg
      421 aactgaggat gccgtaggtc ccgaaggcat ggagaagttc tgtgaagaca ttggtgttga
      481 accagaaaac gtagttatgc ttgtcctagc ttggaaattg gatgcacaaa acatgggcta
      541 ttttactcta caggagtggc tgaaaggaat gacttcccta caatgtgata caacagaaaa
      601 actcagaact actttggatt acttaagatc attattaaac gatacaacaa actttaagct
      661 catttacaga tacgcgtttg actttgcacg ggaaaaggac cagcgcagcc tagacataaa
      721 cactgccaag tgcatgttgg gactgttatt aggaaaaatc tggccccttt ttccagtttt
      781 tcaccaattc ttagagcaat caaaatacaa agtgataaac aaagaccagt ggtgcaatgt
      841 tctggagttc agcagaacga ttagtctcga cctcagcaac tacgatgaag acggagcatg
      901 gccagttttg ttggacgaat ttgtggaatg gtataaagac aagcagatgt cctaggacct
      961 tatgcctggc agcgagagtc actgttccca cggttatgtc acccattagc cataaactgc
     1021 tgtctgtatg gaagcgcatg ctgcttttct tgcaccgcca gcctcttgca ggcaggcgtg
     1081 tctcggtgtt tgctattgaa tgggccgccc tgcttgatgt agcattgttc tcttggaggc
     1141 tgctctgcag ttcgttttca cactacagat tggtgaattt gccaacgtcc tcactgtgat
     1201 tatgtgtata ttgctgttta aattttgtat atgtgtataa aatgaaaagc ttcacctaga
     1261 gattatttct gcaaaaatgt attgtaaaaa taattttgtg gcatattttt ggtccccccc
     1321 tttttttttc aaatgaacca gttatacttt atttggtctc aaatttcaga aaacataact
     1381 gtccccgtaa gcaagtattg ccagaattaa cctcattgct taagaggcca acttctggaa
     1441 gaagtaggag ccatgactta ctgtggcata agccaaatat gacttggttt ccttgacaac
     1501 tttggtattt taaagtgaca aaagttattt atttgagtgc acaaacagct gacacgctac
     1561 aaagcatttc taacacaaaa cgtacaggtt tatggtgttt tttcccttcc tcttcctcct
     1621 ctcctcctta aattgctcct tattttaaat cgaagcttac gtttccataa accttcctct
     1681 gtttccctgc tttgtgttcc tctagcagtg cttggtctgc tgaagctctc tgtgccactg
     1741 tgcaaaccgt cctttgccac ccaccctcat gagcctcctg gtttgctggc ggcatgactg
     1801 caaagcactt tgaactatgc ttgagatttt agttactctt tcatggtgtc tgtaataccc
     1861 tagggctttg gagttgtttg tttgtttttg tttttaaacc acaagtgaga gctgtttgtt
     1921 tcctgtcttt gtttcacccg tgctgggctt ctcctggcca cgcgtccatt gcaggcagtg
     1981 gactgaaacc accagcatcg agctaaccct gttcacactg ggacctttct cggaggggcc
     2041 gcttgccatt ccctgagtca caggtacaga agggtggtag tagccattat gtggatgaga
     2101 aaccagagcc aacacagcag tagttgtgag tttgtacctt atgtcttacg tttaaggttt
     2161 gcatctgctt gcttgcttgc cttgcccctc gtgcagaagt acacagttaa caggtttccc
     2221 caaccatgtg gtgctatgac tcactcggtc cctgaagtct gtgaaaacac atctaagatt
     2281 taacccagga aagagctaat ggctggtttg ctgggtaaat ggtatagagg gatccgtgcc
     2341 tgcccaggca ggtgatggct acaagatggt ggggttattg gccaaaaaag aaaagagtct
     2401 tctccattca gtgtgaacct ttaaatggca ttaaatgagc agagcacaga gacagtgcta
     2461 ccctgaccgc tgtttcacag ttccttttca aagtgttgct attttcatat atttctttcc
     2521 ctgattgaac caccaaagac agaaatgtta tatgtatata tcgtgtgcgt gcatatgcaa
     2581 aatcatgatg tggtggaatg caaatacttg cctttttcta ccaaataatg aggtttggtt
     2641 tgctgtgaaa taaatcagaa gtttaaaaag accaacaacc cgatattgct ttagcataac
     2701 catcctttgt ctgtagtctc acttatgaat tagtatatga acacaatgta aacttcttgg
     2761 aaaaaaccac agcttttgag actgctctat gaaaggcatt ccagtgcata caggtgtgtg
     2821 gcgctgggga ctgctaagac aggcacagct ctgcagagga ggatcccttt tcaggtggtc
     2881 ccacggttaa agaatcattc tctcagggtg actgttgttg aggtaggtca gctgtcgatt
     2941 gtctcgatgc aaagaaggat catagatggg attgttttaa atgctgtgtg agaatctaga
     3001 gagtgtttga aacactaagc acagtgaacc tgcgagtaaa ggtggttacc aacatgagaa
     3061 attccatttt atcttccgtg aacattttga taatagagac tcaagtaaaa accaccgtga
     3121 tgactaggat ggaagtcggc attccagagg ggatgaccaa tatttacaac tccagataat
     3181 ctctgaactg cctcaagaaa caaaccaccg tgactgtggc ttgcctttgg atttctcgat
     3241 tttacagagc tattattaag gggacccctt ttcttgaaga atcgccaagt tacgcaagtt
     3301 gaacgatcat caagagcact tatggctacc attggaagaa gcccgggcgc cttcggttct
     3361 ccagtacctg agccccagcc acccttcctc ccttcacttg tgtttcaggg tgcggcaaca
     3421 tcctcttgtt ggggaatgca gcttgcagcc gtttacactg cactgggtag aagttatcta
     3481 gcaagatgtg ctggatagcc atggtagcct ttggcgtgcc ccttttgaag catgaactct
     3541 tgtgttcagt ctttctaact gattagacaa acctctagat tctggtttaa cagatttctg
     3601 ctgcctctgt ctccatccta accatacttt tgaagtttat acagaaagct ttaagagttt
     3661 agtttgtgcc cttggttttt atttttacaa ctgctaaaat acctctgtaa gccttatcct
     3721 ttatcctttc atagttgtat aaaattgtat agaattcatt caccaactga aatgttggat
     3781 atctgtaaat gagaccaaaa tgtgggttgc tttttttcat aaaataattt ctattgggcg
     3841 ttgctgtgac atgaacagca gccagcctat taactgtgaa tgccttgtgt cgtcagtatt
     3901 tgcattacat tcataaaagt gtgcaagtcc tgtgactccc agcttaacta aatactgtta
     3961 tgccacttaa cgagcacagc aaactggttt aagtttcaat gaaattgatg taaaatgata
     4021 gcccataaat aaacagatat ttgtgtttgg tttcagaact gaaaaaaaaa aaaaaaaa
//
