LOCUS       NM_001033379            3311 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus decapping mRNA 1B (Dcp1b), mRNA.
ACCESSION   NM_001033379 XM_284227 XM_900815 XM_900820 XM_900822 XM_900825
            XM_900830 XM_900833 XM_917383
VERSION     NM_001033379.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ibayashi,M., Aizawa,R. and Tsukamoto,S.
  TITLE     mRNA decapping factor Dcp1a is essential for embryonic growth in
            mice
  JOURNAL   Biochem Biophys Res Commun 555, 128-133 (2021)
   PUBMED   33813271
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Herjan,T., Hong,L., Bubenik,J., Bulek,K., Qian,W., Liu,C., Li,X.,
            Chen,X., Yang,H., Ouyang,S., Zhou,H., Zhao,J., Vasu,K., Cockman,E.,
            Aronica,M., Asosingh,K., Licatalosi,D.D., Qin,J., Fox,P.L.,
            Hamilton,T.A., Driscoll,D. and Li,X.
  TITLE     IL-17-receptor-associated adaptor Act1 directly stabilizes mRNAs to
            mediate IL-17 inflammatory signaling
  JOURNAL   Nat Immunol 19 (4), 354-365 (2018)
   PUBMED   29563620
REFERENCE   3  (bases 1 to 3311)
  AUTHORS   Lin,S.T., Huang,Y., Zhang,L., Heng,M.Y., Ptacek,L.J. and Fu,Y.H.
  TITLE     MicroRNA-23a promotes myelination in the central nervous system
  JOURNAL   Proc Natl Acad Sci U S A 110 (43), 17468-17473 (2013)
   PUBMED   24101522
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC126453.5, AK049193.1, AK047334.1 and AK053525.1.
            
            On Sep 12, 2009 this sequence version replaced NM_001033379.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK153860.1, AK047334.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-72                AC126453.5         6188-6259           c
            73-1516             AK049193.1         1-1444
            1517-2638           AK047334.1         1373-2494
            2639-3311           AK053525.1         1378-2050
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 56.55 cM"
     gene            1..3311
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /note="decapping mRNA 1B"
                     /db_xref="GeneID:319618"
                     /db_xref="MGI:MGI:2442404"
     exon            1..190
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             41..1777
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /EC_number="3.6.1.62"
                     /note="DCP1 decapping enzyme homolog B"
                     /codon_start=1
                     /product="mRNA-decapping enzyme 1B"
                     /protein_id="NP_001028551.2"
                     /db_xref="CCDS:CCDS39610.1"
                     /db_xref="GeneID:319618"
                     /db_xref="MGI:MGI:2442404"
                     /translation="MAAAAAGGLPGKGHDISLAALRRHDPYISRIVDVASQVALYTFG
                     HRANEWEKTGVEGTLFVYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQNPFLLY
                     RNGTLSIYGIWFYDKEECQRIAKLMKNLTQSEQLKACHGAGSSPVTLSSGEGQEVDIL
                     QMLTKAKDEYTKCKTCSEPKQMTNSSAICDNPKLIKPVPVRPSSSQRLQGPAPSKTSD
                     PEPQHLSLTALFGKQDKAPCQETVKPSRTFAHHHHHHHQQQQETRPVHHGVACSLSCE
                     EPRKLSLPVEKQLCPAIQKLMLGSPGLHPLPQHPEQWSCKSGSPSPAGGILPGPVQLG
                     SPWNGRVAHCTQSTCRGHKLLEQLQGAPGAVHKYNPCAPTGPAVATQVAPGQSVAQSQ
                     LVYFSGPLQPPAPGHQALRKEQGALPAQAVSLSGSQESSPTVLPTQELLRKLQVVHQE
                     QQAAPRPALAARFPVSAQGSGTEKPLEAWVSKTASMEKQAPLLQSTCAPLRETDNGLM
                     ALGGQELPAASSSLLLPLQNWESSTVASRPLTRLQLQEALLNLIQNDDNFLSIIYEAY
                     LFSVTQAAMRTT"
     exon            191..231
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            232..359
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            360..426
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            427..556
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            557..685
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            686..1522
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1523..1699
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1700..3311
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1883..1888
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /note="hexamer: AGTAAA"
     polyA_site      1906
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /note="major polyA site"
     regulatory      2610..2615
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2627
                     /gene="Dcp1b"
                     /gene_synonym="B930050E02Rik"
ORIGIN      
        1 gggggcttcc tgaaggctgg gcaggagggt gggtgggaag atggcggccg cggcggcagg
       61 tggcctgcct gggaagggac acgatatcag cctggcagcc ctgcggcgcc acgaccccta
      121 catcagtcgc atcgtggacg tggccagcca ggtggctctg tacactttcg gccatcgggc
      181 caacgagtgg gagaagactg gagtggaggg aaccttgttt gtttatacga ggtctgcctc
      241 cccaaagcac ggattcacca ttatgaatag gctcagcatg gaaaacagaa cagaacccat
      301 tactaaagac ctggacttcc agctccagaa ccctttcctt ctctacagaa acggcacact
      361 gtccatttat ggaatttggt tttatgataa ggaagagtgc cagagaattg caaaactaat
      421 gaaaaacctc actcagagcg aacagttgaa agcctgtcat ggagccggat cctcccccgt
      481 gaccttgagc tcaggagagg gccaagaagt agatatcctg cagatgctca ccaaggccaa
      541 ggatgagtac accaagtgta agacctgttc cgagccaaaa cagatgacca attcctctgc
      601 catctgtgac aaccctaaac ttatcaaacc tgtccccgtg agacccagca gcagccagag
      661 gctgcaagga cctgcgccca gcaagacctc ggaccctgag cctcagcact tatctttaac
      721 agcactattt gggaaacaag acaaagctcc ctgtcaggaa actgtaaagc cctcccggac
      781 ctttgcccac caccaccacc atcaccacca gcagcagcaa gagacgcgtc cagttcatca
      841 cggggtcgca tgctccctgt cctgtgagga gcccaggaag ctctcactcc cggtggagaa
      901 gcagctctgc ccggccattc agaaactcat gctcgggagc ccggggctgc accccctgcc
      961 tcagcaccct gaacagtggt cctgcaaaag tggcagcccc agtcctgccg ggggaattct
     1021 ccctggtcct gtccagctgg ggtccccctg gaatggcagg gttgcacact gcacacagag
     1081 cacttgcaga ggccacaagc tattagagca gcttcaaggt gcccctgggg cagtgcataa
     1141 gtataacccc tgtgcgccta ccggtccagc tgtggccact caggtggctc cgggccagag
     1201 tgtggcccaa tcacagctgg tgtatttcag tggccccctt caacctcccg ccccaggaca
     1261 ccaagctctc aggaaggagc agggtgcact gcctgcacaa gcggtgtccc tctctggcag
     1321 ccaggagagc agccccaccg tgctccctac gcaggagctg ctaaggaagc tccaggtagt
     1381 acaccaggag cagcaggcgg ccccccggcc agccttggca gccaggttcc ctgtgtcagc
     1441 ccagggatca gggacagaaa agcccttgga agcctgggtc agcaagacag ccagcatgga
     1501 gaagcaggct cctcttctgc agtctacctg tgccccactg agggagactg ataatgggct
     1561 catggcccta ggaggccaag aacttcctgc tgcctcctcc agcctcctcc tgcccctgca
     1621 gaactgggag tcctccaccg tggccagcag gcccctcacc aggctgcagc tccaggaggc
     1681 actgctgaac ctcatccaga atgatgacaa cttcttaagc ataatctatg aagcctatct
     1741 cttcagcgtg acacaagcag ccatgagaac cacgtaacca gctacatgag agcaaagact
     1801 aagaattgat cttccaggtt cttcatgtga actggtgtga ccaaacacac ttatgccttt
     1861 ttaacaaagt atagtgatac agagtaaaat gttttatact gtctgatgtc tgggggtttt
     1921 gttccttgtt ttttttttta aaaaaatcac actctcccct ttacttggta ctacaagttg
     1981 agcagttaga tggttctggc caggtcatgt aaggttcgat ttttcctcca tttatgaggc
     2041 catttgagga agagtagagt ttttcatgcg aagggaggtt ctcagagcta tttattaata
     2101 gaatcgctca gggtagagaa ggcagtttct cagggttggg ctctgtgtgc catggtgctt
     2161 gataaccacc agggggcaat attaccccac aagttgccta ctaagggttc cgtgttttcg
     2221 gaagcaatga ggactttacc aaagtcagcc ttttatttgt aaagctccat ttggcatgtt
     2281 tgatctgagc ctttggagga agaatctttc tgaagacatt tctagccagc tttcgttcta
     2341 agtgtcagca gcggccccgg cttgaagcaa cgctccgttt ctcagttcaa gttggctttc
     2401 agacagccac agttagaaaa tgcccatgag aagaggtagt ggctattctg gggcagaagg
     2461 ttgaagattc tccaagctct gtagagctca cctctgtgtc ctgtgcagag aggtaagaag
     2521 caaaattcaa ggggagacag cagaccgacc gactgccttg catccccaac agtgcgtgtg
     2581 ggcatcagcc ctgctaagta ttcacaatga ataaagcttt gtctttactg tcctagttat
     2641 tcctgggtca taaaaagacc tttgagttag ccctttatag ttgaatcgta ctcttctatg
     2701 gagaatttaa aatggaggct ggggtggggg tgcaggtttc cttacagctt ctgataccca
     2761 gaccaggaag cttttgaccc ttgtcctccc tcctggcagc agcatggggc ttctgggaca
     2821 ccacctctcc cttaggaggg cgtgctttcc ctaaggaagg aagctgggct gaagaggggt
     2881 tggtgtctgc tcaccctcac agcacatcgg ctgagcatcg gctgtgctgg cctctggaag
     2941 gggtaggtcc acaaccgcac tgtgctgaac tcatagggat ctctcaagtg cttgacagtg
     3001 agtattcaca ccgctttagt ctgatgagga gaacagggca agagatatcc atggttctgt
     3061 ggtcctgaac cataggaaaa tgtcgctttc caacgtgctc actaaaatgg gagcactatt
     3121 aggctagggt gtacctcagt ggtagagcac acacaggata gagcctaaca cacaaggctc
     3181 ttggttcaat ccctagcact taaaaaaaga aatgttattt ggccagtggc caggctttaa
     3241 aaataatctg tgagggctgg gaatgtgatt tggtgataaa aataaataaa aagtaaaata
     3301 atgaaaaaca c
//
