LOCUS       NM_025705               3026 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus discoidin, CUB and LCCL domain containing 1 (Dcbld1),
            transcript variant 1, mRNA.
ACCESSION   NM_025705
VERSION     NM_025705.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3026)
  AUTHORS   Yoshida,Y., Han,B., Mendelsohn,M. and Jessell,T.M.
  TITLE     PlexinA1 signaling directs the segregation of proprioceptive
            sensory axons in the developing spinal cord
  JOURNAL   Neuron 52 (5), 775-788 (2006)
   PUBMED   17145500
REFERENCE   2  (bases 1 to 3026)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK016485.1, BY096153.1, AK014521.1, AV229589.1 and AC153525.12.
            
            [WARNING] On Apr 23, 2024 this sequence was replaced by
            NM_025705.5.
            
            On Nov 29, 2016 this sequence version replaced NM_025705.3.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK016485.1, AK014521.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849377, SAMN00849378
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-49                AK016485.1         2-50
            50-189              BY096153.1         1-140
            190-3023            AK014521.1         2-2835
            3024-3025           AV229589.1         251-252
            3026-3026           AC153525.12        52034-52034         c
FEATURES             Location/Qualifiers
     source          1..3026
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 26.41 cM"
     gene            1..3026
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /note="discoidin, CUB and LCCL domain containing 1"
                     /db_xref="GeneID:66686"
                     /db_xref="MGI:MGI:1913936"
     exon            1..217
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             133..1644
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; discoidin, CUB and LCCL domain-containing
                     protein 1"
                     /codon_start=1
                     /product="discoidin, CUB and LCCL domain-containing
                     protein 1 isoform 1 precursor"
                     /protein_id="NP_079981.2"
                     /db_xref="CCDS:CCDS23839.1"
                     /db_xref="GeneID:66686"
                     /db_xref="MGI:MGI:1913936"
                     /translation="MGTGAGGPSVLALLFAVCAPLRLQAEELGDGCGHIVTSQDSGTM
                     TSKNYPGTYPNYTVCEKIITVPKGKRLILRLGDLNIESKTCASDYLLFSSATDQYGPY
                     CGSWAVPKELRLNSNEVTVLFKSGSHISGRGFLLTYASSDHPDLITCLERGSHYFEEK
                     YSKFCPAGCRDIAGDISGNTKDGYRDTSLLCKAAIHAGIITDELGGHINLLQSKGISH
                     YEGLLANGVLSRHGSLSEKRFLFTTPGMNITTVAIPSVIFIALLLTGMGIFAICRKRK
                     KKGNPYVSADAQKTGCWKQIKYPFARHQSTEFTISYDNEKEMTQKLDLITSDMADYQQ
                     PLMIGTGTVARKGSTFRPMDTDTEEVRVNTEASGHYDCPHRPGRHEYALPLTHSEPEY
                     ATPIVERHLLRAHTFSTQSGYRVPGPRPTHKHSHSSGGFPPATGATQVESYQRPASPK
                     PVGGGYDKPAASSFLDSRDPASQSQMTSGGDDGYSAPRNGLAPLNQTAMTALL"
     exon            218..430
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            431..565
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            566..617
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            618..690
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            691..824
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            825..865
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            866..953
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            954..1003
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1123
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1124..3026
                     /gene="Dcbld1"
                     /gene_synonym="4631413K11Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcccagaggg atctgtgccg tgtgcccgcg ccgcgccggg ccgggccgcg aaggaggctg
       61 ccctaggcgg gcagcggcag tgtagagccg ggccgggagg ccgatcctgc gggtctggag
      121 tccggcggga ccatggggac cggggctggt gggccgagtg tcctggcgct gctgttcgcc
      181 gtgtgtgctc cgctccggtt gcaggcggag gagctgggtg atggctgtgg gcacatagtg
      241 acctctcagg acagtggcac aatgacatct aagaattatc cagggactta ccccaattac
      301 actgtgtgtg aaaagatcat cacagtccca aaggggaaga gacttattct gaggttggga
      361 gatttgaaca ttgagtccaa gacctgcgct tctgactatc tcctcttcag cagtgcaaca
      421 gatcagtatg gtccatattg tgggagttgg gctgttccca aagaactccg gctgaactca
      481 aacgaagtga ctgtcctctt caagagtgga tctcacattt ctggccgggg ctttctgctg
      541 acctacgcca gcagtgacca tccagattta ataacctgtt tggaacgagg cagccattat
      601 ttcgaggaaa aatacagcaa attctgccca gctggctgta gagacatagc aggagatatt
      661 tctgggaata caaaagatgg ttacagagat acctctttat tgtgcaaagc tgccatccac
      721 gcagggatca tcacagatga actaggtggc cacatcaact tgcttcagag caaagggata
      781 agtcactatg aaggactcct ggccaatggc gtgctctccc ggcatggttc tttgtcggaa
      841 aagcgatttc tttttacaac cccaggaatg aatattacaa ctgtggcgat tccatcagtg
      901 atcttcatcg ccctccttct gactggaatg gggatctttg caatctgtag aaagaggaaa
      961 aagaaaggaa atccatatgt gtcagctgac gctcagaaaa caggctgttg gaagcagatt
     1021 aaatatccct ttgccaggca tcagtcgacg gaatttacca tcagctatga caatgaaaaa
     1081 gagatgacac aaaagttgga tctcatcact agtgatatgg cagattatca gcagcctctc
     1141 atgattggca caggcacagt cgcgagaaag ggctctacct tccgacccat ggacacagac
     1201 actgaggagg tcagagtgaa cactgaggcc agcggccact atgactgtcc tcaccgcccg
     1261 ggccgccatg agtacgcact gcctttgacg cactcagaac ctgagtatgc cacacctatc
     1321 gtggagcggc acctgctgcg agctcacacc ttctccacac agagcggcta ccgagtccct
     1381 gggcccaggc ccactcacaa acactcccat tcctctggag gctttcctcc tgctacagga
     1441 gccacccagg ttgaaagcta tcagaggcca gcaagcccca agcctgtggg tggtggctat
     1501 gacaagcctg ctgctagcag cttcttggac agcagagacc cagcctctca gtcacagatg
     1561 acttccgggg gagatgatgg ttattcggca cccagaaacg gtcttgcgcc cctcaaccag
     1621 acggccatga ctgctctttt gtgaacccaa tgtgaaagaa acctgctgtg gtactgagcg
     1681 cgcaccgctg cgagtcactg gaagaaatgt gcaagcgtgc atgtgtgact cttcaggatc
     1741 ctagagacga cctcacttac tgtttacaga actgtgcagc tggtttagtt ccaacccttc
     1801 ctgcagagcc agttggtttc tgttgtgcta gaacaagggg acttttctca tttgtcttaa
     1861 ctgtgatgct gtgctgtaaa atgtgcaatt tgtacagtta tatttaacac gaattaacat
     1921 tacgaagttt gcggtgtttg ttttctacac agggcttaag gagaaaacac gggatttgta
     1981 tagcggtagc ctgtgtttct cagtgtattt gattatctga cgctgtaagc agcaggtctg
     2041 tttaaaaacc tcgttggttg ttgtggctct ttcctttttg ataaagtaaa agcattttta
     2101 ccgctttgtc tcctggaaga aatgaaatta cttgaaacat gtaaagcact ccaggatagg
     2161 tgattgctag caatggtggc ccatttatgc aagcaaacat ctgactttag cagctgcagc
     2221 ctgctttctt agactttcct tgagaggtag ggcagcctag tgtcctgggg cctgcgtgga
     2281 tcccagctgc atcctgaggg accaccttct ctaaggaaag ggcttagcct actgcacagt
     2341 gttcctaagt aaatctgcct ttccagggtg ctgagattca aggctagcca cactgttcat
     2401 ccgcaccttg taatgaagga ggcacagggc ttgtagctca aggcaggaat atcaaatatt
     2461 tctaaacctc agattaaaaa taaagctgag cccagaagcc ctacttctta caactttctc
     2521 cagagataat gcatgtgggt gacttccact atccctggaa aacaaatgtc gggtcatatg
     2581 gcttcgcgca tgcgcagaag cagagctttt ctagtggcgc gctagtaact gtcctggtga
     2641 tgtaaaaagc agttttcttt ttcccctgca tacgtgctta tactcataga gtagcccatg
     2701 tctcggctgt acctcatgtt ttgtgttgtt tttccctgag ttttactttg tgaatgaact
     2761 ggggagttaa cctctttttg ccaaagagga gaaagtatgt gtcttgttta ttgaaagaaa
     2821 acatggacca aaaacaaaca aaaaatcctt tccttgcaaa ttgtattata atcctatttg
     2881 tgtgaattct atcgatgtta aagtagggtg ctgagagctc atggcatagg gtctgctggt
     2941 tatagtggag gttaaaccat ttaccttacg gagtttacaa gattgtgtat gtgtactaat
     3001 tgtaataaac tatgccaaat cagaga
//
