LOCUS       NM_175539               2881 bp    mRNA    linear   ROD 29-JUL-2024
DEFINITION  Mus musculus DDB1 and CUL4 associated factor 12-like 2 (Dcaf12l2),
            mRNA.
ACCESSION   NM_175539 XM_983127
VERSION     NM_175539.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2881)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL670220.8 and AK037333.1.
            
            On Mar 14, 2007 this sequence version replaced NM_175539.2.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK076436.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-204               AL670220.8         154162-154365       c
            205-1903            AK037333.1         155-1853
            1904-2881           AL670220.8         151485-152462       c
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 23.85 cM"
     gene            1..2881
                     /gene="Dcaf12l2"
                     /gene_synonym="A130007F10Rik; Wdr40c"
                     /note="DDB1 and CUL4 associated factor 12-like 2"
                     /db_xref="GeneID:245403"
                     /db_xref="MGI:MGI:2445178"
     exon            1..2881
                     /gene="Dcaf12l2"
                     /gene_synonym="A130007F10Rik; Wdr40c"
                     /inference="alignment:Splign:2.1.0"
     CDS             328..1737
                     /gene="Dcaf12l2"
                     /gene_synonym="A130007F10Rik; Wdr40c"
                     /note="WD repeat-containing protein 40C; WD repeat domain
                     40C; WD40 domain"
                     /codon_start=1
                     /product="DDB1- and CUL4-associated factor 12-like protein
                     2"
                     /protein_id="NP_780748.1"
                     /db_xref="CCDS:CCDS30100.1"
                     /db_xref="GeneID:245403"
                     /db_xref="MGI:MGI:2445178"
                     /translation="MAPQQTGSRKRKASEVEQGAGTSSLPGRAAAAAGTGQADGPLLL
                     AKRPRRPVARRSLVHYLKGRALGADGHPGVAGFEGDLRSYGVLRLPELLRERQLTLGP
                     LNKVFASQWLNARQVVCGTKCNTLFVVDVQTGRITRIPLMRDRGPGQTRAQPTCGIHA
                     IQLNPSKTLLATGGENPNSLAVYQLPTLDPVCLGDRQGHRDWIFAIAWMSDTVAVSGS
                     RDGTVALWRVDSDMFNGSIPWHNNSGIPRYSHIRPRDMEAIPRATTNPGNRKVRALAF
                     SGRNQELGAVSLDGYFHLWKARSSLSRLLSLRLPYCRENVCLTYCDELSLYAVGSQSH
                     VSFLDPRQRQQNIKPLCSREGGTGVRSLSFYQHIITVGTGHGSLLFYDIRAQKFLEER
                     ASASPDSFLGRTGRKLKLTCGRGWLNQDELWVNYFGGTEEFPNALYTHCYNWPEMKLF
                     VGGGPLPSGLHGNYAGLWS"
     regulatory      2824..2829
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dcaf12l2"
                     /gene_synonym="A130007F10Rik; Wdr40c"
                     /note="hexamer: AATAAA"
     regulatory      2834..2839
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dcaf12l2"
                     /gene_synonym="A130007F10Rik; Wdr40c"
                     /note="hexamer: AATAAA"
     polyA_site      2843
                     /gene="Dcaf12l2"
                     /gene_synonym="A130007F10Rik; Wdr40c"
                     /note="major polyA site"
     regulatory      2861..2866
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dcaf12l2"
                     /gene_synonym="A130007F10Rik; Wdr40c"
                     /note="hexamer: ATTAAA"
     polyA_site      2870
                     /gene="Dcaf12l2"
                     /gene_synonym="A130007F10Rik; Wdr40c"
                     /note="major polyA site"
     polyA_site      2881
                     /gene="Dcaf12l2"
                     /gene_synonym="A130007F10Rik; Wdr40c"
                     /note="major polyA site"
ORIGIN      
        1 actgacttca ccacctccca gacggcagca cttcccgccc tcggccaagt cccaggcact
       61 gccaccacac tcaacgcagt gcttactgct ccttccaagc tcacagtcct tgcagagcca
      121 cgctgccacc ttcgcctctt tggccaccaa agcacccagg acgctcggtg ccctagggat
      181 cactcagtca cctggtccct ggggcccagt gtcacccccc gctgattcgg agacacagcc
      241 acccccaccg ccaccacggc caccacgggt gccacgcgcc gccgcagccg cgccgccgcc
      301 gcctctgcaa cccgcccgcc gcccaccatg gccccacagc aaacaggtag caggaagcgg
      361 aaagcctcgg aggtcgagca gggcgctggg acttcttcgt tgcctgggag ggcggctgcg
      421 gcggcgggaa cgggccaagc ggatgggcca ttgctgctgg ccaagaggcc gcggcggccc
      481 gtggctcgcc gctccttggt gcactacttg aagggccgtg ctctgggcgc tgatggccac
      541 ccgggggtag cgggcttcga gggcgatctg cgcagctatg gggtcctcag gctgcccgag
      601 ctgctgaggg agcgccagct gaccctaggc cccctcaata aggtgttcgc atcgcagtgg
      661 ctcaatgcca ggcaggtagt gtgtggcacc aagtgtaaca cgctcttcgt ggttgatgtc
      721 cagactggcc ggatcactcg cattcccctg atgcgagaca gagggccagg acaaacccgt
      781 gcccaaccca cctgtggcat ccacgccatc cagctgaatc cctcaaagac cctcctagct
      841 acaggaggtg aaaaccctaa cagtctagca gtctatcagc tacccaccct agaccctgtg
      901 tgcttaggtg accgccaagg ccacagggac tggatctttg ccatcgcctg gatgagtgat
      961 accgtggctg tgagtggctc ccgtgatggc accgtggcac tctggcgggt ggattccgac
     1021 atgttcaatg gcagcattcc ctggcacaat aattcaggaa ttccacggta ttcacacatt
     1081 cgtccaaggg acatggaagc cattccaagg gcaactacta acccaggtaa ccgcaaagtg
     1141 cgagcccttg cattcagtgg cagaaaccag gagctgggag ctgtgtccct ggatggctac
     1201 ttccacctgt ggaaagcccg gagctccctg tccaggctgt tgtccctgag gctgccttac
     1261 tgcagggaga atgtgtgtct tacctactgt gatgagttgt ccctctacgc agtgggttct
     1321 cagtctcacg tttcattcct ggatccaaga caacgccagc agaacatcaa acctttgtgt
     1381 tcccgagagg gaggcacagg tgtgcgttct ctgagtttct accagcacat catcactgtg
     1441 ggcactggac atggctctct gctcttctat gacattcgtg cccagaagtt cctagaggaa
     1501 agggcctcag ccagtccaga ctcttttctt gggcgcacag ggaggaagct caaactcacg
     1561 tgtggcagag gctggctcaa ccaagatgaa ctctgggtaa actactttgg aggtactgag
     1621 gaattcccca acgcactcta cactcactgc tacaactggc ctgagatgaa gctctttgtg
     1681 ggtggaggcc cactcccttc aggcctccat ggcaactatg caggcctctg gagctaaagt
     1741 cactgtgctc ttgggaaagt gtatagattt atcttttaag ttcaaactta cattctttgc
     1801 atatgtgctt ttgtgtaata taggtatgtg catgcctgat tgtgtgtgtg tgtgagtgat
     1861 ttattttcaa agtggagttg acccaacttt ctagtgctca atcacagaag gaaacgaaaa
     1921 aggagagaga gaggaggaag aggaacagaa ggaagagaca gagagagaca gagatagaga
     1981 cagagagaga gagagagaga gagagagaga gagagagaga tttctatatc ctcttagcaa
     2041 taaaaacttg ctttgacttg ggcactttct ctcagagcac tacatttttg ctgtatcata
     2101 caaaaaagtt ttaatctttt tttttttgca gtgatttatg tattttcttt ctttaggcga
     2161 atgtagtcat tgctttcagt gaattcagca ctagagtttt accagcgttc caataatttt
     2221 tttcaagtca tttgaatagt ccatggacat accatcttga tagaagatgt tttaaaatgt
     2281 ttgttggcct gatctcagaa aatatttaaa gctctaatca aagtttcttt ctttctttct
     2341 tttttttttt tttaatgtac ttcaagtttt agattataac tgtttggagt gtctttcatt
     2401 tgaatgtagg aaaactcagt agtggatttg aacattgtgg gagtataaaa tggtttaaga
     2461 tgtattattt tatttttgga attatacaat attgttcaaa ctactaatca acaaaatttt
     2521 aattcagaaa acatgagcat aaccacactt agccctaaag ccttcttttt taaagtactg
     2581 tattgtgacc tgctttcctg agaaccattt atgttaaaga tgttcagcgc taatgaaatc
     2641 tgacataaat tttcaggata attggaaagg tatttgggga attaacattt cctgaacatt
     2701 caagaaacac agtccaatta gccatttgca atggtcagag tgagtgcagt tgatacttgt
     2761 attgggtaca tatatagtta ttttatgtgg atcacttttt agtatgtgat gtattgtaaa
     2821 aaaaataaaa aaaaataaaa atgtgttcag catcataata attaaattaa gtttaaaatg
     2881 a
//
