LOCUS       XM_006538229            3346 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus DDB1 and CUL4 associated factor 12
            (Dcaf12), transcript variant X2, mRNA.
ACCESSION   XM_006538229
VERSION     XM_006538229.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006538229.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3346
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..3346
                     /gene="Dcaf12"
                     /gene_synonym="1500001L20Rik; 5830424K06Rik; Wdr40a"
                     /note="DDB1 and CUL4 associated factor 12; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 19 ESTs, 1302 long SRA reads, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:68970"
                     /db_xref="MGI:MGI:1916220"
     CDS             303..1592
                     /gene="Dcaf12"
                     /gene_synonym="1500001L20Rik; 5830424K06Rik; Wdr40a"
                     /codon_start=1
                     /product="DDB1- and CUL4-associated factor 12 isoform X2"
                     /protein_id="XP_006538292.1"
                     /db_xref="GeneID:68970"
                     /db_xref="MGI:MGI:1916220"
                     /translation="MEFGWDHSLHKRKRLPPVKRSLVYYLKNREVRLQNETSYSRLLH
                     GYAAQQLPSLLKEREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTGQITKIP
                     ILKDREPGGVTQQGCGIHAIELNPSRTLLATGGDNPNSLAIYRLPTLDPVCVGDDGHK
                     DWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVLTKSDARHNVSPVPVYAHITHKALKD
                     IPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKAENTLSKLLSTKLPYCRENV
                     CLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSRERGSGIRSVSFYEHIITVGTG
                     QGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTGRGWLNHDETWRNYFSDIDF
                     FPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS"
ORIGIN      
        1 agaaccagaa cagactcaga aagggagggc tgccacagtc ctgcccgctc acaatgtgtt
       61 aatctccgaa gacacaagcc taatcaggaa agatggggct gcctctccca aggcagaacg
      121 gcagatgggc caacacagtt ccctggaggt atgaggcctg aagctgaagg gaccagcagg
      181 taactgggca ccacagcctg aggccagtca gtctcaagca agaacatcct gcttcctcca
      241 agggtttctt tgcctgagga aagtggaagc tggcactcac attccttcag gatcttcgga
      301 aaatggagtt tggctgggat cattcgctgc acaaaaggaa aagactcccc ccagtgaaga
      361 gatccctagt gtactacctg aagaaccgcg aagtcaggct ccagaatgag accagctact
      421 ctcgcctgtt acatggttat gcagcacaac agcttcccag tctcctcaag gagagagaat
      481 ttcacctcgg gacccttaat aaagtgtttg cttctcagtg gttgaatcat aggcaagtgg
      541 tgtgtggcac gaaatgcaac acactctttg tcgtggatgt ccagacaggc cagatcacca
      601 agattcccat tctgaaagac cgggaacctg gaggtgtgac tcagcagggc tgtggtatcc
      661 atgcaattga actgaatcct tctagaacac tcctagccac tggaggagac aaccctaaca
      721 gtcttgccat ctaccgcctg cctaccttag atcctgtgtg tgtgggtgat gatggacaca
      781 aggattggat cttttctatt gcgtggatca acgatactat ggcagtgtct ggctcacggg
      841 atgggtctat gggactctgg gaggtgacag atgatgtgtt gaccaaaagt gatgcaagac
      901 ataacgtgtc accagtccct gtgtatgctc acatcactca caaggcctta aaggatatcc
      961 ccaaggagga tacaaacccg gacaactgca aggtgcgggc tttagccttc aacaacaaga
     1021 acaaggagtt gggagcggta tcactagatg gctactttca tctctggaag gctgaaaata
     1081 ccttgtctaa gctcctttcc accaaattgc catattgtcg agaaaacgtg tgtctggcct
     1141 atggtagtga gtggtcagtg tatgcagtgg gctctcaagc gcatgtctcc ttcttggatc
     1201 cacggcagcc atcgtacaac gtcaagtctg tctgctccag ggaacgaggc agtgggattc
     1261 gatcagtgag cttctatgaa cacattatca ctgtgggcac agggcagggc tccctgctgt
     1321 tctatgacat ccgagctcaa agatttttgg aagagaggct ctcagcttgt tatgggtcca
     1381 agcccagact cgcaggggag aatctgaaac taactactgg caggggctgg ctgaatcatg
     1441 atgaaacctg gaggaattac ttttcggaca ttgacttctt ccccaatgct gtttacaccc
     1501 actgctacga ctcgtccgga acgaaactct ttgtggcagg gggccccctc ccttctgggc
     1561 tccacggaaa ctatgctgga ctgtggagtt aatgacaact aactttctcc caaaatgcag
     1621 atttacacta acttccaccc tcagtttcct tgtttgattt ccctagctgt ggaaggctct
     1681 cctgtctatg caaacagagt ttgcttgtgg gtcaggcagt tactaggaag aggctctatg
     1741 cagaaatcca aaagctggga cgttctacgt cagttggtgg cttgttgttc tgggtttttt
     1801 gtttgttttc actttgcagt aattagaatt ttacttttcc cttttctgct ttttaaagca
     1861 aacactgtta caatcccttt ttattttttc ctctccttcc tctggcttct ttacactgaa
     1921 atgacaaagt cattcttacc cttacttcac tgaggtaggg cccctttata atcgtgtggt
     1981 ggctgtccga ctttctgtga aagtgtggga gcctttgtgt gcgtgtgtgt gtgtgtgtct
     2041 gtctgtgtgt ctgtgtgcgt ttgtgtgtgt gaacttgtgt gcctgctggt actgcatcac
     2101 tgatactact tggaatgagg attatctgta attaaagtat ttataaaaga aacaacttta
     2161 ctcagagtcc agctttggga ctagcctgta tcttctttaa ggtccgacat tgtaggaaga
     2221 gaaacagaca caccaggaaa acccttgagt tagagaagcc ggatgggagg ggaggctgca
     2281 tcccaggact ccaaactgtc caggcctacc tgtccttcca cccacgcagg aatgcccatg
     2341 tgtgtgttac ttccactccc gacctcctgt ctgctcgccc agactgggga ctgcaggcca
     2401 catcacagcc tagataaaga caatcctctc cccagcctcc tgcctctgac agggtctgat
     2461 ctgaccgaga gcaggcagtc tcgagcttgt gtgcttactg ctcatgactt ggaggaggaa
     2521 cttttccatt cttggggttt tgctggtatt ttctaatttg tctgtccagg aaggtgtggt
     2581 ttgtagcgag tgctttgtgt gtgggatctg ttctcagtgc agcagggctt agtgttggaa
     2641 gtcactgtcc tgctctgttg gctcattcct agggtagtga caggtggctg tgccagcatc
     2701 gctgcatgtg acagtgtagc tgtgattggt aatttgcttg tttctctcaa actatttagt
     2761 gtgaagagtt ttttgttgtt gtttttgttt ttaacttgca agccagttgt tgtcttccga
     2821 acatcatgtg gaaaggaagc tctccccacc ctagtaccct gagacacaca gtgctgcctg
     2881 agaaatgcag tcatacacct gcacccagtt tctcagttgc tccccagttc ttccatgctc
     2941 tctttgtgtc aaatgagtat tctcataatg gctggggctg ctggggaggg aagcggcagg
     3001 cccaccgtag gacacagcat cctccacagg ttttagaata atcatcctat aatctagaga
     3061 aataggtgct atcaacagga aattaagcaa aatgctggat gctgtgaatc ttttgtctta
     3121 atttttttct attcttaaac tacaggctgt agatgtctta gttctcacag aacttctgtc
     3181 tttttaaact gacttgtgtg tttaagtaaa caaaactctt gtaggatgtt ttgtgccatt
     3241 gccagtccgt ctcctgtgat gcttttgatt gtcttgagat tttctgtttt taaaaatgta
     3301 gcatttgact tttttgccaa ggaaaaataa atactatccc agtgca
//
