LOCUS       NM_013726               2444 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus DBF4 zinc finger (Dbf4), transcript variant 1, mRNA.
ACCESSION   NM_013726
VERSION     NM_013726.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Li,L., Sun,Y., Davis,A.E., Shah,S.H., Hamed,L.K., Wu,M.R.,
            Lin,C.H., Ding,J.B. and Wang,S.
  TITLE     Mettl14-mediated m6A modification ensures the cell-cycle
            progression of late-born retinal progenitor cells
  JOURNAL   Cell Rep 42 (6), 112596 (2023)
   PUBMED   37269288
REFERENCE   3  (bases 1 to 2444)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2444)
  AUTHORS   Sundberg,J.P., Dadras,S.S., Silva,K.A., Kennedy,V.E., Garland,G.,
            Murray,S.A., Sundberg,B.A., Schofield,P.N. and Pratt,C.H.
  TITLE     Systematic screening for skin, hair, and nail abnormalities in a
            large-scale knockout mouse program
  JOURNAL   PLoS One 12 (7), e0180682 (2017)
   PUBMED   28700664
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 2444)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   6  (bases 1 to 2444)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   7  (bases 1 to 2444)
  AUTHORS   Kneissl,M., Putter,V., Szalay,A.A. and Grummt,F.
  TITLE     Interaction and assembly of murine pre-replicative complex proteins
            in yeast and mouse cells
  JOURNAL   J Mol Biol 327 (1), 111-128 (2003)
   PUBMED   12614612
REFERENCE   8  (bases 1 to 2444)
  AUTHORS   Hwang,S.Y., Oh,B., Knowles,B.B., Solter,D. and Lee,J.S.
  TITLE     Expression of genes involved in mammalian meiosis during the
            transition from egg to embryo
  JOURNAL   Mol Reprod Dev 59 (2), 144-158 (2001)
   PUBMED   11389549
REFERENCE   9  (bases 1 to 2444)
  AUTHORS   Guo,B. and Lee,H.
  TITLE     Cloning and characterization of Chinese hamster homologue of yeast
            DBF4 (ChDBF4)
  JOURNAL   Gene 264 (2), 249-256 (2001)
   PUBMED   11250080
REFERENCE   10 (bases 1 to 2444)
  AUTHORS   Lepke,M., Putter,V., Staib,C., Kneissl,M., Berger,C., Hoehn,K.,
            Nanda,I., Schmid,M. and Grummt,F.
  TITLE     Identification, characterization and chromosomal localization of
            the cognate human and murine DBF4 genes
  JOURNAL   Mol Gen Genet 262 (2), 220-229 (1999)
   PUBMED   10517317
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB611145.1, BC138709.1, AK132403.1 and AC152165.2.
            
            On Jul 7, 2010 this sequence version replaced NM_013726.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ003132.1, BC138710.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134, SAMN01164135
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-182               BB611145.1         2-183
            183-2287            BC138709.1         1-2105
            2288-2440           AK132403.1         2250-2402
            2441-2444           AC152165.2         147398-147401
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 3.43 cM"
     gene            1..2444
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /note="DBF4 zinc finger"
                     /db_xref="GeneID:27214"
                     /db_xref="MGI:MGI:1351328"
     exon            1..250
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     exon            251..423
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     exon            424..603
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     exon            604..654
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     exon            655..724
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     exon            725..801
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     exon            802..838
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     exon            839..884
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     exon            885..1013
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     exon            1014..1125
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     exon            1126..1250
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     exon            1251..2444
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2376..2381
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /note="hexamer: AATAAA"
     polyA_site      2402
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /note="major polyA site"
     regulatory      2411..2416
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Dbf4"
                     /gene_synonym="Ask"
                     /note="hexamer: AATAAA"
     polyA_site      2436
                     /gene="Dbf4"
                     /gene_synonym="Ask"
ORIGIN      
        1 aaatctttaa ccgccgcggc tcccgggtct gagctacagc ctcttcctgc tccgagcctc
       61 cgcgccggaa ccggccctca agcgcggccc ggcgccgagg ccgaggccgg agccggggcc
      121 ggggaggccc tgggagcttt gtgttcgcgg ccgttccatg cggcccccgg tgcggaccca
      181 gcatgtaggt gcctggtggc tgccatgaac ctcgagacca tgaggatcca cagcaaagca
      241 cctctcccgg gtggcatcca agacagaaat gaaaagaatc gaccatcctt gaaatccctg
      301 aaggctgata atagactgga aaaatccaaa tataagcccc tttggggaaa aatattttac
      361 cttgacttgc cttctatcac catatgtgag aaactacaaa aagatataaa ggaactcgga
      421 gggcgagttg aagaatttct cagcaaagat atcagttatt ttgtttcaaa taaaaaggaa
      481 gcaaagtatg cacagacatt gggtcgcgtt tctcctgtac caagtccaga atctgcatat
      541 actgcagaaa ccacctctcc tcatcccagc catgatggaa gttcctttaa gtctcaagac
      601 agagtatgtt tgagccgagg aaaattgtta gctgaaaaag ctgtgaagga tcatgatttt
      661 attcctgcta atagtatatt atcaaatgcc ttatcatggg gagtaaagat tcttcatatt
      721 gatgacattc gatactacat tgaacagaag aagaaagcac tgagtgcact caagaaatcc
      781 agtgcttctg ggaaggatgc ggggaaaaaa gctggtcctg gaatacaaaa gacaagaaca
      841 gggagactca agaagccttt tttaaaggtt gaagatgtga accggtgcta caggccattt
      901 taccttcagc tccccagtct gccgtgtata aactactttc ttcagaagcc ctgcagtccg
      961 tttgatatag agaagtcatc cagcgtccag aaacaagctc agcccaagct cagaattaat
     1021 atggacggcg ataaatgtgg aaccccagtt caactccagt tgaaggaaaa gagaaaaaaa
     1081 ggatattgtg aatgttgctt acagaaatac gaagatctcg aaactcacct tctgagtgag
     1141 aaacacagga actttgcaca gagtaaccag tatcaagttg ttgatgatat tgtatctcag
     1201 ttagttttcg attttgtgga atatggaaga gacacacctc aaaagaaaag aataagatac
     1261 agtgtcgggt ccctttcttc tgtttctgca aatgtcctga aaaacactgc accgaaggag
     1321 aagccactct tggagcccaa tttccagaag gacgtgggcg aaagcagtgg gcacctgctc
     1381 aagccgaact ctcagtatga agaaacccag aaacctgaag aaaagcatgg gtttgcttca
     1441 gagcccacaa cctattcttc agctggattg aaaggatgtg acaggaaacc agtgagcatg
     1501 ttcaatgcaa gtgagcctga cccagagcag gagtatgcac agctacctct gcgtgacagc
     1561 acaccggaac accaagtgac cgagggtaga aatgacggag aacagagagt agaccctgct
     1621 ccaggcgtgt cgcagtcatg tggacaagtt tctcatctca gtacagaaag taatctaccc
     1681 caaccacagt tagctgcaga cattacacag ctttcagcaa aagatctgca agaaaagggc
     1741 tttcatgttg tgataggtca tgcttctgac ctggtggcat taaatacatc aaaagagcag
     1801 ctaacaatga aggcgagaac tccaccctgt agtccccagg agcctcatga gtgtgacact
     1861 gagaacatgg agaatttgcc ttgtggtaaa atccagcgga aagtgagaat gctattaggg
     1921 caacagaaag caaatgctga accgagtgct gaattggata aaaagagaac tgagtatctt
     1981 cctgcacatg aagacagaac ttgtgggtca ccagtacagt ctctattgga cctttttcag
     2041 acaagcgagg agaaatcaga atttttgggt tttacaggct acactgaaaa cagtggaata
     2101 tgtgatgttt tagatatttg ggaggaagaa aattcaagta ccctgttgtc aacgtttttt
     2161 tcttcccctt caacttctgc attcgttgga ttttagtatt aaatgtgctt ttcagaagtg
     2221 acagctatat tcctgaagtt tttataaata catatataat tagtggtggg ggtttgtttt
     2281 gttttcgcca acttttttat ggagccatct gtaaatatta attaaggtgg tgtttgtaat
     2341 tttttacagg attgactagc tgttacaaat tatacaataa aaacttaatg acttatttta
     2401 tattcctgag aataaaaatg aatatcattt gctttatcac tgaa
//
