LOCUS       NM_001099785            3457 bp    mRNA    linear   ROD 31-MAY-2024
DEFINITION  Mus musculus DNA segment, Chr 3, ERATO Doi 751, expressed
            (D3Ertd751e), transcript variant 2, mRNA.
ACCESSION   NM_001099785
VERSION     NM_001099785.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3457)
  AUTHORS   Hansen,G.M., Markesich,D.C., Burnett,M.B., Zhu,Q., Dionne,K.M.,
            Richter,L.J., Finnell,R.H., Sands,A.T., Zambrowicz,B.P. and
            Abuin,A.
  TITLE     Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
  JOURNAL   Genome Res 18 (10), 1670-1679 (2008)
   PUBMED   18799693
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK138405.1 and AK085404.1.
            
            Transcript Variant: This variant (2) lacks an alternate 5'
            non-coding exon, compared to variant 1. Both variants 1 and 2
            encode the same isoform (a).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK144064.1, SRR1660813.132109.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849382
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3                 AK138405.1         2-4
            4-2180              AK085404.1         2-2178
            2181-3457           AK138405.1         2403-3679
FEATURES             Location/Qualifiers
     source          1..3457
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 19.96 cM"
     gene            1..3457
                     /gene="D3Ertd751e"
                     /gene_synonym="2810009O15Rik; 4930415G15Rik"
                     /note="DNA segment, Chr 3, ERATO Doi 751, expressed"
                     /db_xref="GeneID:73852"
                     /db_xref="MGI:MGI:1289213"
     exon            1..72
                     /gene="D3Ertd751e"
                     /gene_synonym="2810009O15Rik; 4930415G15Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             73..651
                     /gene="D3Ertd751e"
                     /gene_synonym="2810009O15Rik; 4930415G15Rik"
                     /note="isoform a is encoded by transcript variant 2;
                     UPF0462 protein C4orf33 homolog"
                     /codon_start=1
                     /product="UPF0462 protein C4orf33 homolog isoform a"
                     /protein_id="NP_001093255.1"
                     /db_xref="CCDS:CCDS17332.1"
                     /db_xref="GeneID:73852"
                     /db_xref="MGI:MGI:1289213"
                     /translation="MDFKIEYTWDGFPVRHEPVCVRLSPCEQGVKMEVSAPLFNDPPS
                     PLGEPGKPFSELWNYEVVEAFFLNDTTKQYLEVELCPHGQHLVLLLAGRRNVWKKELP
                     LSFKASRGGTNWEGEAYIPWSYFPPNVTKFNSFAIHGSNDRRVYEALYPVPQHELQQG
                     QKPDFHRLEYFKPFSFNTLLGEEWRQPEPDLW"
     exon            73..253
                     /gene="D3Ertd751e"
                     /gene_synonym="2810009O15Rik; 4930415G15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            254..314
                     /gene="D3Ertd751e"
                     /gene_synonym="2810009O15Rik; 4930415G15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            315..366
                     /gene="D3Ertd751e"
                     /gene_synonym="2810009O15Rik; 4930415G15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            367..566
                     /gene="D3Ertd751e"
                     /gene_synonym="2810009O15Rik; 4930415G15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            567..3457
                     /gene="D3Ertd751e"
                     /gene_synonym="2810009O15Rik; 4930415G15Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3431..3436
                     /regulatory_class="polyA_signal_sequence"
                     /gene="D3Ertd751e"
                     /gene_synonym="2810009O15Rik; 4930415G15Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      3452
                     /gene="D3Ertd751e"
                     /gene_synonym="2810009O15Rik; 4930415G15Rik"
                     /note="major polyA site"
ORIGIN      
        1 cctgaggccg cgttgggggc tgagtgggtt gcttggcgcc ttccgcagtg gcgcagcgag
       61 tgtctgtctg agatggattt taaaatcgaa tacacttggg atggtttccc agtgagacat
      121 gagccagtgt gtgtcaggct gagtccgtgt gagcagggag tgaagatgga ggttagtgct
      181 ccattattca atgatcctcc atcccctctc ggagaaccag gaaagccttt cagtgaactg
      241 tggaattatg aagttgtgga agcatttttt ttgaatgata caactaagca gtatttagaa
      301 gtcgaacttt gtccgcatgg acaacattta gttcttttac tagctggaag aagaaatgtt
      361 tggaaaaaag agctcccatt atcattcaaa gcgtccagag gagggactaa ttgggaaggt
      421 gaagcttata ttccttggag ttatttccca ccaaatgtga caaaatttaa ctcatttgca
      481 atccatggat caaatgatag gagagtttat gaggcacttt accctgtgcc acagcatgag
      541 ctacaacaag gacaaaaacc tgacttccat cgtctagaat atttcaagcc tttcagtttc
      601 aacacactgc ttggagaaga atggaggcag ccagaaccag acctgtggta atctaataaa
      661 ttacataaac acatttctac aacaaacatt ttaacagaga tcaccaaaat gtagtatctc
      721 tgtggtaaat tgtatacagt gaacaaagaa atagaaactc tgtgtagcat aaaataattt
      781 ttacttaatt cctctccaca cttgaaatca gtacaaaaca atactctatt ttagttgatg
      841 agactatcta tatctgctaa ggcatcaaga tagaggagtt atctaactag atatttttac
      901 tgagtaagaa gaaatgaaat agtcttgaat taaggaaatg gagttgataa ttttacttat
      961 agataaatgg tattttctta atgttgctaa aaaagatgtc agaaaccttc atttgatttt
     1021 tgaagtgtca atcctggttg aagattgttc caatataata aatcagtacc cctgtctcac
     1081 ataaacgggt catgcagaca aaaactaaac aagaggagcc taagagtgaa actgcacctc
     1141 agatcaacta gacacagctg cagagttctt ccagcagctg cagaatgaac tctgttttca
     1201 gaggcttatc gaacatgttc cagaataaaa ccagtaacac atttgttgca attcagggag
     1261 ctgtagctac ttgggtttat ttatactaga agacttttag atctgataaa caaattcagc
     1321 caagtggcac acaacacagt cagaatacat acaaaaataa tagattttcc acaccccatt
     1381 aaccaacctg ctgagaaatc aggaatgcat ttccactctc agcaaaaaga atagttagga
     1441 acaagcttgt gcctgtttgt taattacctt tctcatggtg tctaaaagat aattgacaaa
     1501 agcaagtctg cgaaggaagg atttgtattg gctcacagtg ctggttacac tccttcataa
     1561 tggggaaaat atggctacag gaatgtgagg tgcctggtca catgtgtcta cagttaaaaa
     1621 gcagagatga atggtgtgct cagctcactt tgtcattttc attcagccgt ggaccctgtc
     1681 ctgtggaatg atgtagacct cattctgggt acgcttgctg ttctcaaacc tttttaaaaa
     1741 cactcacacg gacatattga tgagagcagc tcctaggtta ttctaactcc atgtaagcgg
     1801 gcagggagac tagtcatcat atcttgctga ggtggtgaaa ggcttctaca atgaaagtta
     1861 cagagctttt gagagagaaa ttaaagaaga cactagaaga tgaaaagaca ttccatgttc
     1921 ttagatcagc agatttagta ttggggaaat ggccatatga aaatgagcta tctagaagtt
     1981 tttatgatca ctttcaaaat ttagatgaca ttcttcacat agctagaaca gtatcctaaa
     2041 atgtgcttgc aaacacaaaa gacctataat aggcaaagat gtcctgagta ccaagaacat
     2101 tattggaagt tcctaatatt tggtttcaag ttatactaca tagttgtagt aataaatggg
     2161 accagcataa aaataagcaa tagagccatg aactagggca gaggatccaa aacatcctac
     2221 acagctgtag atacttaaat tttgactaag gaataaaaaa cactcatgag aaacaatttc
     2281 ctcaaccatt gatgctggga aaatagtata ttgatatgga acagtagaga taaatcccca
     2341 tatcctgccc tgtacataaa ttagccccaa gaccttaata taagatctga aacattgaag
     2401 tcaaaagaaa taaaagaatc aacaaaatga atttcatcaa attaaaaagc tgcatatgaa
     2461 aggagataat taatgaagtg aagagacaga ctatagcagg ggagaatcag agtcctaaca
     2521 tccagcatat ccgaagtact tagaaaaaca ccaccccagc aagggagggc aaagtgcaat
     2581 caataagcag gcagatcatc tacacagttc tcaaaagaac ttgtataggt agctaatgat
     2641 tataaaaaac ttagtgtctt taggtattag gaacatgcat gttaaaaaac tgcattgaga
     2701 tttcatttca tcccagtaaa aatgactatc ctgaagaaag caacaaatgc tggtgagggt
     2761 aaggagaaag agttcaaatc ctctattctt ggagacttat attagtattg tcaacagtgg
     2821 agctatactg aaaatagagc tgcatatggt ccagctctac cactttgagt acatccccca
     2881 gggaatctga atcagcatag ctgtgttcat cacactagcc aagctatggt gccggtctag
     2941 gtgtctgcct acggatgaat ggataaagaa aacacacgca cacgcacgca agacagcaca
     3001 gagaaatggc ataccattca gccacaaaaa gaacaaaatt atgtcattat caggaaaatg
     3061 gatgcgtcta gatactatgt taagtaaaat aagtcagtct ctgaaacata aatagctctt
     3121 gtttctcctc ctgtatgaaa gttgaagaaa agaaaacacc tgaatataca agaggagact
     3181 attagagaag tggaagagga tttaaggaga gatgggtgaa aagatggagt ggggaataaa
     3241 aaatgtctat agttgtatac atggatggat ctgccaatgt aaaacctgct attctgtgta
     3301 atcttatcca agtaaaaatg gctgttttca agagaagaac aaatgctggt gaggggaaga
     3361 aggaaaaaga tctgtgtcta ttatttatat tagtattatt aactgtgaaa atcaatatgc
     3421 tgatacacaa attaaaagtt tcttgtctag aagtctc
//
