LOCUS       NM_001252439            5927 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus DNA segment, Chr 16, ERATO Doi 472, expressed
            (D16Ertd472e), transcript variant 3, mRNA.
ACCESSION   NM_001252439
VERSION     NM_001252439.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5927)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 5927)
  AUTHORS   Li,S.S., Qu,Z., Haas,M., Ngo,L., Heo,Y.J., Kang,H.J., Britto,J.M.,
            Cullen,H.D., Vanyai,H.K., Tan,S.S., Chan-Ling,T., Gunnersen,J.M.
            and Heng,J.I.
  TITLE     The HSA21 gene EURL/C21ORF91 controls neurogenesis within the
            cerebral cortex and is implicated in the pathogenesis of Down
            Syndrome
  JOURNAL   Sci Rep 6, 29514 (2016)
   PUBMED   27404227
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 5927)
  AUTHORS   Lewandowski,J.P., Du,F., Zhang,S., Powell,M.B., Falkenstein,K.N.,
            Ji,H. and Vokes,S.A.
  TITLE     Spatiotemporal regulation of GLI target genes in the mammalian limb
            bud
  JOURNAL   Dev Biol 406 (1), 92-103 (2015)
   PUBMED   26238476
REFERENCE   4  (bases 1 to 5927)
  AUTHORS   Sharov,A.A., Piao,Y., Matoba,R., Dudekula,D.B., Qian,Y.,
            VanBuren,V., Falco,G., Martin,P.R., Stagg,C.A., Bassey,U.C.,
            Wang,Y., Carter,M.G., Hamatani,T., Aiba,K., Akutsu,H., Sharova,L.,
            Tanaka,T.S., Kimber,W.L., Yoshikawa,T., Jaradat,S.A., Pantano,S.,
            Nagaraja,R., Boheler,K.R., Taub,D., Hodes,R.J., Longo,D.L.,
            Schlessinger,D., Keller,J., Klotz,E., Kelsoe,G., Umezawa,A.,
            Vescovi,A.L., Rossant,J., Kunath,T., Hogan,B.L., Curci,A.,
            D'Urso,M., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol 1 (3), E74 (2003)
   PUBMED   14691545
REFERENCE   5  (bases 1 to 5927)
  AUTHORS   Gitton,Y., Dahmane,N., Baik,S., Ruiz i Altaba,A., Neidhardt,L.,
            Scholze,M., Herrmann,B.G., Kahlem,P., Benkahla,A., Schrinner,S.,
            Yildirimman,R., Herwig,R., Lehrach,H. and Yaspo,M.L.
  CONSRTM   HSA21 expression map initiative
  TITLE     A gene expression map of human chromosome 21 orthologues in the
            mouse
  JOURNAL   Nature 420 (6915), 586-590 (2002)
   PUBMED   12466855
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC098883.3, AK005829.1 and AW536354.1.
            
            Transcript Variant: This variant (3) differs in the 5' UTR compared
            to variant 1. Variants 1, 2, 3 and 4 encode the same protein.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219382.38446.1,
                                           SRR7345562.3462327.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164140 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-118               AC098883.3         207582-207699       c
            119-545             AK005829.1         63-489
            546-601             AC098883.3         178901-178956       c
            602-1317            AW536354.1         1-716               c
            1318-5927           AC098883.3         171347-175956       c
FEATURES             Location/Qualifiers
     source          1..5927
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 45.36 cM"
     gene            1..5927
                     /gene="D16Ertd472e"
                     /gene_synonym="1700010I10Rik; 2310009O17Rik;
                     E330003K22Rik; Eurl"
                     /note="DNA segment, Chr 16, ERATO Doi 472, expressed"
                     /db_xref="GeneID:67102"
                     /db_xref="MGI:MGI:1196400"
     exon            1..265
                     /gene="D16Ertd472e"
                     /gene_synonym="1700010I10Rik; 2310009O17Rik;
                     E330003K22Rik; Eurl"
                     /inference="alignment:Splign:2.1.0"
     exon            266..399
                     /gene="D16Ertd472e"
                     /gene_synonym="1700010I10Rik; 2310009O17Rik;
                     E330003K22Rik; Eurl"
                     /inference="alignment:Splign:2.1.0"
     exon            400..915
                     /gene="D16Ertd472e"
                     /gene_synonym="1700010I10Rik; 2310009O17Rik;
                     E330003K22Rik; Eurl"
                     /inference="alignment:Splign:2.1.0"
     exon            916..978
                     /gene="D16Ertd472e"
                     /gene_synonym="1700010I10Rik; 2310009O17Rik;
                     E330003K22Rik; Eurl"
                     /inference="alignment:Splign:2.1.0"
     exon            979..5927
                     /gene="D16Ertd472e"
                     /gene_synonym="1700010I10Rik; 2310009O17Rik;
                     E330003K22Rik; Eurl"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1285..1290
                     /regulatory_class="polyA_signal_sequence"
                     /gene="D16Ertd472e"
                     /gene_synonym="1700010I10Rik; 2310009O17Rik;
                     E330003K22Rik; Eurl"
                     /note="hexamer: AATAAA"
     polyA_site      1303
                     /gene="D16Ertd472e"
                     /gene_synonym="1700010I10Rik; 2310009O17Rik;
                     E330003K22Rik; Eurl"
                     /note="major polyA site"
     regulatory      5901..5906
                     /regulatory_class="polyA_signal_sequence"
                     /gene="D16Ertd472e"
                     /gene_synonym="1700010I10Rik; 2310009O17Rik;
                     E330003K22Rik; Eurl"
                     /note="hexamer: AATAAA"
     polyA_site      5925
                     /gene="D16Ertd472e"
                     /gene_synonym="1700010I10Rik; 2310009O17Rik;
                     E330003K22Rik; Eurl"
ORIGIN      
        1 gctgtctgcg ctgcggcgcc ggcggaaaca atagtgcgga tcggatcgtg gcgcgcggac
       61 ggtggcccgc ggagccggac ggtagaggtc cttctctgag ccgctctggt gctcaggacc
      121 agtgccggga cggacggaca gacgagacgg atcccacgcc gtgccggacg cccacgatcc
      181 tcgagtggcg tccccgggac cctccggtcc gtggctgaag agtctccgac gtgagccgat
      241 ccttcccggg tgtcccagtc cccacgggca ctatgaacga agaggagcag tttgtaagca
      301 ttgacttgaa tgatgacaac atttgcagtg tttgtaaact gggaacagac aaagacacgc
      361 tctccttctg ccacatttgc ttcgagctaa atctcgaggg agtgccaaag tcgaatcttt
      421 tacacaccaa atcagtgaga ggccataaag actgctttga aaaataccat ttaatagcaa
      481 accaggattg ttctcgttcc aagctttcca aaagtactta tgaaggagtt aaaaccatcg
      541 tgagtaagaa gataaactgg attgtgcagt atgcccaaaa taaaaatctg gatttggagt
      601 ccgagtgttc caaaacttcc cagcatcccc tgttgaattt caggcataag ccagagaaga
      661 aattgctccc acagtttgac tctcaggtgc caaagtactc ggcaaaaggc tcagccggaa
      721 acgcaggcag catctcaagc tatgcgcaga gaatcctgga gcacagagaa aatacagact
      781 tccggctggg tttattggaa gacgcggatg cattgtggac tcacagtcac agccaggcac
      841 agaaaacaga agagacaagc tctggtccgg aggggactat ccagacccag aatccacatt
      901 acagccgtga agaattgaat tcgatgactc ttgctgaagt agtacaactg agtgcgaagc
      961 tccaacagcg aatccaagag gtttttgaag agttaacaca ccaggtgcaa gagaaggact
     1021 ctctggcgtc agagctccat gtccgtcacg tggctatcga gcaactcctc aagaactgct
     1081 ccaagttgcc atgcctccaa gtgggacgga cagggacgag gtcacaccta cccatgaacc
     1141 actgaaggga ccggagctgt cctgctttca tcctctactg ctctgctaag catatggacc
     1201 gagaaaacat gggaaggaag tcatggtcca tttttatggt tgttgtgctt gcaaaaccta
     1261 agataatact cattatcttt atctaataaa gcagatcact ctagtccagg gttactcaat
     1321 catttggctt catcggggga cttcttataa ttactaaatg cccctcccta tcttttacca
     1381 tatgtgacta cttaaatatt ctgttatagt gtttttactg accaattttt attgtaactc
     1441 agttgtcaaa aacaatagaa gcctagtaag gtcttatgtt cacctaaact actagagaga
     1501 atttttaaga gggaaataga attcgtaata tcaccttatt tatgagcaat attttaatat
     1561 aaaattttat atagagaatt gctattttgg gtatttttca ttgtctttat aagtctgtat
     1621 ttgaatggcc atgtgtattt gcacttcctg tgtgaatatg ttcacctctg tcaagatcgc
     1681 tgcattttgg caatacggtg tttttataac ttatctttct ttccaaagat acatgtgttt
     1741 cggatagtat tcggagaagc agtctaccta gctgagctgt tttaactact taacagaata
     1801 tgaaagtgga attaatcgtt cctttaaagc aaatatccaa gtaaacaaag cagcagatta
     1861 ttgttttcta atggaaacag tgctgaattc gcttaggaag aaaagactat tctagtttgt
     1921 atgtgtcagt ctccataaaa gtagtggccc tgccctgctt cttaattctc aacactttct
     1981 tggatgtgtt agttttggac aaagtaggtc aactatcttc agactgcact ggtcttcctt
     2041 tgggggaaaa aataaaatta ttatgtgtgc cacttcacat ggagttcccg taatctacga
     2101 actgtccaaa ttctgctatc cacatcactg aaattagtcc aaaaaataat aataacaaac
     2161 cattaaagaa agaaaaggaa aagcatttca aggtactttt ctaagtttta aaactctaaa
     2221 gggatagacg attatagcac caccaccacc caaaaaaaaa acttcaataa aaaggatagt
     2281 ataagctact ttggtttcat attcttagct actaagttaa tgatgacaca aaagctagtg
     2341 caaaattaag atgaactctt tagctgatgc ttagaatgta tttgtgtggc tgataggttt
     2401 tgcctgcaga aatctaagga aagaaaaccc attcattcac ttggcagccc ctcacttggc
     2461 agcccctcat gcataaagat ggtttctgcc ttgaagtcgg cagtctgtac ctgggcatgg
     2521 gtcagacttt aatattgaac ataaataata tttgactaag caaacagctg cctcactgta
     2581 gaaaaagcac cttttcctga tgctaggatg tgttaaactg gcctggctgt gtgcattagt
     2641 caatgtccca ttggttttgc tctgtcctga agaaaactta cctttgaagc tttttggaag
     2701 gagtttctgg ggaaaaagaa aaaaaaaaaa aaagaatact tttcagtttc tctcagttct
     2761 ttgagtcatc caaaatgaat ttaaaatctg gggagcagag gtgaactcat tgccttagtt
     2821 ttggtgagct ttaaattgaa tgtgtgcaat atggaagggt ccacatttac aagctgggtg
     2881 aagacaacgt gtcctgatta tgccagtaag tgtttcagtg cttggttgtt atggttacat
     2941 tttccaacgt gactgcactc ctgcctggcg taactcctta aggatggcag cacacttggg
     3001 cttctgtctg gatgatggaa aagcagtcgg gacagccata ggagtataag agagtcggct
     3061 tttggaatgt gcagtactcc gtgtatttct atccgaggag acatacccta cggtgcagtc
     3121 ctaagtacca gtgttaccca aagaaaaacg tttgcttatc tcttattggc aaacacttag
     3181 tttactaatg agtttggaat aattggaatt tctcccatgt actctttaag gtcttaactg
     3241 ggacctctga ttcatttctt ttagatattt cactggaaac accaaaggaa tagtgctccg
     3301 tagtctgtct ctggtgctgg tgggagcact cgtacccatg cgcgtgggtt ttgctggagc
     3361 gcactacttt gtgtaattca actgccagtt atttgttcag ggttcttggt tgtggtggtg
     3421 gcttgcttgc ttgcttgttt tgacacaggg tcttgctaca tagcttttgc tagcctagag
     3481 ttctctttgt ggaccaggct ggcctgggat tcgtggcaaa tctcctgcct caggaggaga
     3541 tctagtgctg tggttcaggt ctatatctta ctcctagctt gatacatgct cttgattgaa
     3601 tatgcagtta ttgtatatgc aaaaataagg aaggggacag agttgaggtc cagtttaagg
     3661 aagcaggaac ttttacaagt actggtttct tctctgtttg gctctttcaa agttgttgtg
     3721 tgttttgaga aagttcagaa gaaacttcac acgtgatttc atttaaaaac aacaacaaca
     3781 acaacagatg cactgctagt gagcccgtac gtagaagccc gagcttctac gaggagcgaa
     3841 gtgaagtttt gtcatactag acttcatagt taaacaaggt gcatatttta aaaattagac
     3901 ttcatagtta aacaaggtgc atattttaaa aatcagaagt cagatgtgat tttaacacat
     3961 atttttcttt aaagattagt gtttttatgt gcctagcaca tatcaggccc tgagttatta
     4021 attcctgtca ccctagtaca tatacaaagg tttggtttct ggtttgggtt ctattatgtt
     4081 gcccagaccc aagcttagtg gccatcttac cgcttcagcc ttctgagtgg agacatgggg
     4141 gggaggggag gggattgaca tacattgcca tgcttggctt aaatactcct gttgtccatt
     4201 cttgtagcat ttctccagag attaccgcct gattctcgca ttaatttcta agttagttct
     4261 ttggaacggg catccacttg gcacgccacg ctgatgatcc aaacagtccg cttgcttcac
     4321 tgtgtgcttc ctgcgtgtag cactggagtc aaggaaaccc ttgcgtttcc aagtcccatg
     4381 tttgcctctc ccattcttat ataacactta atgattattt ttcaaaacgt gtgcatcctg
     4441 gcaagtgatt tcaggaacat ggttgaagaa tacttcgttg ccatcttgac aggtagcttg
     4501 tggtttcttg gactcttgct gtttcctatg gaccattgag aaatggcttt taccattttg
     4561 tttgtttata tagaactcac cttggtgttt attcttttaa ggcttgtcag gtttttgtta
     4621 attttcaaag tcatcctttt taatcagttt gtgtacttaa gtgagaatgt taaagatctc
     4681 gctggccttt taaagggttc agatgtgtga ccaggcaaaa taattccatg gacatgagct
     4741 gttatttaat ggcggagtat agcgttcctg tcatcacgtt ttgttttgat tgtttgaagg
     4801 agttgtttgt tttacttttt gcaagctcat ttactgacag atattactac tgttcacgct
     4861 acagcaagat gtgtggatct tttaagactt catacgtata aaaattataa tataccctct
     4921 gttaagctat gacttaacgc agagacttga tttgttttgg gtttgattcc ggttttacct
     4981 tgaacagaat tttttttttt ctgagaaaat ttggtttaaa aaaaaaaaca ctaaaggaca
     5041 gagccctaaa taaaatactg ttgccaagtt aagctttgtg gtgtggggta cagaagagtt
     5101 tatctgctga aataatcgga caccttgggg aaggggaagt cacgctggtc taggaagagt
     5161 gtgtgtgtga cctttgcctt tcatttcccc aattcctttc ggttccccgg ctgacatcag
     5221 ccttcacctg agcaacccca ggccgtgccc accttgatag gaaccgatca cgtgggtgta
     5281 gacagttaag atttttagac atttaatttg taaatgtttt cactgatatt tttagtttga
     5341 agaaaactcc aattagcaaa gtagtttaat ttcaaactag tttgaaattt ctcagtaatt
     5401 tccccccaat ttcaaggtta ccaacgagaa gcaaagatgt cctggagaca gactcattta
     5461 aagctgcacc agccactgtg caccaagtgt agtggattta gctttgaaga tcggattggt
     5521 ttgatttctt gtttttttcc cctgccctac tgcctccaga ggaggtggct ttaaaaagtg
     5581 cttcgtagtg atgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgagacaga
     5641 gacagtgaca gcgacagcga aacctggctg catctgcagc agtccttgaa cttcaatgtg
     5701 tgctttgaaa acttcttttc agcaatgttg ctgccattta gaaagcgaaa atgaaactgc
     5761 cgtgatcaaa gctaagttgg tctccaaaag aaacaaaaag attattttgt cttcgtccgg
     5821 gttatatgca atttatatat ttgtattctg ctttgaaact gtaactagat aagtctgtct
     5881 actattttta actttacaag aataaaacaa atattttggt agctatc
//
