LOCUS       NM_001346538            2143 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 15
            (Cyp4f15), transcript variant 2, mRNA.
ACCESSION   NM_001346538 XM_006523410
VERSION     NM_001346538.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2143)
  AUTHORS   Visel A, Thaller C and Eichele G.
  TITLE     GenePaint.org: an atlas of gene expression patterns in the mouse
            embryo
  JOURNAL   Nucleic Acids Res 32 (Database issue), D552-D556 (2004)
   PUBMED   14681479
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT033759.32 and CT485613.9.
            
            On Oct 19, 2016 this sequence version replaced XM_006523410.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC021377.1, ERR3363657.218262.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-181               CT033759.32        146662-146842
            182-380             CT033759.32        147090-147288
            381-525             CT033759.32        151675-151819
            526-579             CT033759.32        153447-153500
            580-707             CT033759.32        153589-153716
            708-829             CT033759.32        156305-156426
            830-1100            CT033759.32        158804-159074
            1101-1167           CT033759.32        160962-161028
            1168-1297           CT033759.32        161236-161365
            1298-1431           CT485613.9         2674-2807
            1432-1496           CT485613.9         2896-2960
            1497-1579           CT485613.9         3102-3184
            1580-2143           CT485613.9         3559-4122
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 17.76 cM"
     gene            1..2143
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /note="cytochrome P450, family 4, subfamily f, polypeptide
                     15"
                     /db_xref="GeneID:106648"
                     /db_xref="MGI:MGI:2146921"
     exon            1..181
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     CDS             168..1751
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /note="isoform 2 is encoded by transcript variant 2;
                     cytochrome P450, 4f15; cytochrome P450 CYP4F15"
                     /codon_start=1
                     /product="cytochrome P450, family 4, subfamily f,
                     polypeptide 15 isoform 2"
                     /protein_id="NP_001333467.1"
                     /db_xref="CCDS:CCDS84293.1"
                     /db_xref="GeneID:106648"
                     /db_xref="MGI:MGI:2146921"
                     /translation="MGFFRMPQLDLSWLGLRLEASSPWLLLLLIGASWLLARVLTQTY
                     IFYRTYHHLCDFPQPPKWNWFLGHLGMITPTEHGLKEVTNLVATYPQGFMTWLGPIIP
                     IITLCHPDIIRSVLNASASVALKEVVFYSFLKPWLGDGLLLSDGDKWSSHRRMLTPAF
                     HFNILKPYVKIFNDSTNIMHAKWQHLASGGSARLDVFENISLMTLDSLQKCVFSFDSN
                     CQENPSEYISAILELSALVTKRYHQLLLHIDSLYQLTCSGRRFHKACHLVHSFTDAVI
                     QDRRRTLPSKHEDDVLKAKAKSKTLDFIDVLLLSKDEDGKELSDEDIRAEADTFMFEG
                     HDTTASGLSWILYNLARHPEYQERCRQEVQELLRDRESTEIEWDDLAQLPFLTMCIKE
                     SLRLHPPVTVISRRCTQDIVLPDGRVIPKGVICIINIFATHHNPTVWPDPEVYDPFRF
                     DPENIKDRSPLAFIPFSAGPRNCIGQTFAMNEMKVALALTLLRFRVLPDDKEPRRKPE
                     LILRAEGGLWLRVEPLSTQ"
     exon            182..380
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     exon            381..525
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     exon            526..579
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     exon            580..707
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     exon            708..829
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     exon            830..1100
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     exon            1101..1167
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     exon            1168..1297
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     exon            1298..1431
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     exon            1432..1496
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     exon            1497..1579
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
     exon            1580..2143
                     /gene="Cyp4f15"
                     /gene_synonym="Cyp4f-15"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaagaaactc taaaggaagg agaaccgtgg gaaactcact gttcctgaga gaaggtgcct
       61 ggctaagagt aggttaaaga gaactctaag cctgaacctg gctgcttatt tctagataac
      121 cagctatctg aagccaaaaa gtcagagtga tcctgttggc ttcagacatg gggtttttca
      181 ggatgccaca gttggacctg tcttggctgg gactgaggct ggaggcatcc tcaccatggc
      241 tgcttttgct gctgatcgga gcttcctggc tcttggcccg tgtcctgact cagacctata
      301 tcttctacag aacatatcat catctttgtg atttccctca accccccaaa tggaattggt
      361 tcttgggtca cctaggcatg atcacaccca ctgagcatgg tctgaaggag gtgactaacc
      421 tggtggccac ctacccccag ggcttcatga catggctggg tcctatcatt cctatcatca
      481 ctctgtgcca ccctgacatc attcgatctg ttctcaatgc ctcagcttcg gtagccctaa
      541 aggaagtagt cttctacagt ttcctgaaac cttggctggg ggatgggctc ttgctgagtg
      601 atggtgacaa gtggagcagc caccgtcgca tgttgacacc tgctttccat ttcaacatcc
      661 taaaacccta tgtgaagatt ttcaatgaca gcaccaacat aatgcatgcc aagtggcagc
      721 acctggcctc aggtggcagc gcccgtctgg atgtgtttga gaacatcagc ctcatgacct
      781 tggacagcct gcagaaatgt gtcttcagtt ttgatagcaa ctgccaggag aatcccagtg
      841 agtatatttc tgccatcttg gagctcagtg ccttagtgac caaacggtac caccagctgc
      901 ttctacacat agactcactc tatcagctca cctgtagtgg gcggcgcttc cacaaggcct
      961 gccacctggt gcacagcttc acagatgctg tcatccagga tcgacgacgt actctcccca
     1021 gtaagcatga ggatgatgtc ctcaaggcca aggctaagtc caaaactctg gatttcattg
     1081 atgtgctgct gctgagcaag gatgaagatg gaaaggagct gtcagatgag gacattagag
     1141 cagaggctga caccttcatg tttgagggcc atgacaccac agccagcggg ctctcctgga
     1201 tcctgtacaa tctggcaagg cacccagaat accaggagcg ctgccggcag gaggtgcagg
     1261 agctgctgag ggatcgagag tctacagaaa ttgagtggga cgacttggcc cagctaccct
     1321 tcctgaccat gtgcatcaag gagagtctgc ggctgcatcc cccagtcacg gtcatttccc
     1381 gtcgttgtac ccaagacatt gtgctcccag atggccgggt catacctaaa ggtgttatct
     1441 gcatcatcaa tattttcgcg acccatcaca acccaactgt gtggcctgac cctgaggttt
     1501 atgacccctt ccgctttgac ccagagaata tcaaggacag gtcacctctg gcttttattc
     1561 ccttctccgc tgggcccagg aactgcatag gacagacgtt tgctatgaac gagatgaagg
     1621 tggcgctggc gctgacgctg ctgcgcttcc gtgtgctgcc agatgacaag gagccgcgcc
     1681 ggaagcccga gttgatcctg cgcgcagagg gcgggctgtg gctgcgggtg gagccgctga
     1741 gcacacagtg actccctgca cctggacggg tcccacccac ccgcttacct ctacggttgt
     1801 cacctgtgcc agaggctcgc agaataccag tagggggcgc tggaggacga cagggaacca
     1861 gcagttgtgg ggcgggagct ggggttagca tcctttggcc cagatccctg acttcattgg
     1921 cctctacatt gtcctagttg gtcttactct attgcccaat agagagataa agggaagtgt
     1981 ctaggcagga tggaggccag gctcgagctc agagaacctt ataagttgag gtaaacttcc
     2041 atcgccttga cctccattct aatctcaaaa ctccaattct aggattcttt agtgtttctg
     2101 tgaaaactaa attttaggtt tattaaacct aacaagcctg cca
//
