LOCUS       NM_001104927            2169 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus cytochrome P450, family 2, subfamily j, polypeptide 8
            (Cyp2j8), transcript variant 1, mRNA.
ACCESSION   NM_001104927 XM_974565
VERSION     NM_001104927.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Graves JP, Gruzdev A, Bradbury JA, DeGraff LM, Li H, House JS,
            Hoopes SL, Edin ML and Zeldin DC.
  TITLE     Quantitative Polymerase Chain Reaction Analysis of the Mouse Cyp2j
            Subfamily: Tissue Distribution and Regulation
  JOURNAL   Drug Metab Dispos 43 (8), 1169-1180 (2015)
   PUBMED   25994032
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL807390.11.
            
            On Jun 19, 2019 this sequence version replaced NM_001104927.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660821.32.1, SRR1660819.171085.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849375,
                                           SAMN00849381 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-227               AL807390.11        147027-147253       c
            228-390             AL807390.11        143693-143855       c
            391-540             AL807390.11        140912-141061       c
            541-701             AL807390.11        139389-139549       c
            702-878             AL807390.11        118869-119045       c
            879-1020            AL807390.11        115272-115413       c
            1021-1208           AL807390.11        110340-110527       c
            1209-1347           AL807390.11        87076-87214         c
            1348-2169           AL807390.11        83806-84627         c
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 44.56 cM"
     gene            1..2169
                     /gene="Cyp2j8"
                     /gene_synonym="Cyp2j8-ps"
                     /note="cytochrome P450, family 2, subfamily j, polypeptide
                     8"
                     /db_xref="GeneID:665095"
                     /db_xref="MGI:MGI:2449817"
     exon            1..227
                     /gene="Cyp2j8"
                     /gene_synonym="Cyp2j8-ps"
                     /inference="alignment:Splign:2.1.0"
     CDS             12..1523
                     /gene="Cyp2j8"
                     /gene_synonym="Cyp2j8-ps"
                     /note="isoform 1 is encoded by transcript variant 1;
                     cytochrome P450, 2j8; cytochrome P450, family 2, subfamily
                     j, polypeptide 8, pseudogene"
                     /codon_start=1
                     /product="cytochrome P450, family 2, subfamily j,
                     polypeptide 8 isoform 1"
                     /protein_id="NP_001098397.1"
                     /db_xref="CCDS:CCDS57288.1"
                     /db_xref="GeneID:665095"
                     /db_xref="MGI:MGI:2449817"
                     /translation="MFATIGCLVSNICSEIHLWTLLLAALTLLLLVDYIKNRHPKNYP
                     PGPWRLPFVGNLFQFDLDVSHLHLGIQPFVKKYGNLISLDFGTIPSVIISGEPLIKEA
                     LTCMGQNFLKRPILAARQHIFKNNGIISSSGQTWKEQRRFTLMILKNFGLGKKSLEQR
                     IQDEAHHLVEAIAEEKGRPFDPHFMINNAVSNIICSITIGERFEYEDNQFQELLKLAD
                     ETLCLEASKVLMLYNVFPSIFKYLPGPHQKLFSNWEKLKLFFSHVMDSHRKDWNPSAP
                     RDFIDAFLTEMAKYSDKTTTSFNEENLICTTLDLFFAGTETTSTALRWALLYITVNPE
                     VQEKVHSEIDRVIGQGRHPTIDDRDSMPYTNAVIHEVLRMGNIIPLNVPREVEADITL
                     AGFHLPKGTMVLTNLTALHRDPKEWATPDVFNPEHFLENGQFKKRESFLPFSVGKRGC
                     PGEQLARSELFTFFTALMQKFTFKPPINEKLSLNFKMGVALSPVSYCICAVPR"
     exon            228..390
                     /gene="Cyp2j8"
                     /gene_synonym="Cyp2j8-ps"
                     /inference="alignment:Splign:2.1.0"
     exon            391..540
                     /gene="Cyp2j8"
                     /gene_synonym="Cyp2j8-ps"
                     /inference="alignment:Splign:2.1.0"
     exon            541..701
                     /gene="Cyp2j8"
                     /gene_synonym="Cyp2j8-ps"
                     /inference="alignment:Splign:2.1.0"
     exon            702..878
                     /gene="Cyp2j8"
                     /gene_synonym="Cyp2j8-ps"
                     /inference="alignment:Splign:2.1.0"
     exon            879..1020
                     /gene="Cyp2j8"
                     /gene_synonym="Cyp2j8-ps"
                     /inference="alignment:Splign:2.1.0"
     exon            1021..1208
                     /gene="Cyp2j8"
                     /gene_synonym="Cyp2j8-ps"
                     /inference="alignment:Splign:2.1.0"
     exon            1209..1347
                     /gene="Cyp2j8"
                     /gene_synonym="Cyp2j8-ps"
                     /inference="alignment:Splign:2.1.0"
     exon            1348..2169
                     /gene="Cyp2j8"
                     /gene_synonym="Cyp2j8-ps"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agactctcac catgtttgct actataggtt gcctggtgtc taacatctgc tcagaaatcc
       61 atctctggac tctgctgctg gctgctctca ccttgctgct cctggttgac tacatcaaaa
      121 acaggcaccc caagaactac cctcctggac catggcgcct gccatttgtg ggcaacttgt
      181 ttcagtttga tttagatgtg tcacatctgc atttggggat ccagccgttt gtgaagaagt
      241 atggaaacct aattagcctg gattttggta ccatcccttc agtgatcata agtggagaac
      301 ccttaataaa agaagcatta acttgcatgg gacagaactt tttgaaacgc cccattttag
      361 cggcaaggca acatattttt aaaaacaatg gaattatttc ctctagtggc caaacatgga
      421 aggaacaaag aaggttcaca ctgatgatac tcaagaattt tggattaggg aagaaaagct
      481 tagaacaacg catacaggat gaggctcacc atcttgtgga agccatagca gaggagaaag
      541 gacggccttt tgaccctcac ttcatgatca ataatgcagt ttccaatatc atttgttcca
      601 tcactattgg ggaacgtttt gagtatgaag acaatcagtt tcaggagcta ctgaagttag
      661 cagatgagac cctgtgtttg gaggcatcaa aggtgttaat gctctacaat gtctttccat
      721 ctatatttaa atatcttcct ggaccacatc aaaaactttt cagcaactgg gaaaaactga
      781 aattgttttt ttcccatgtg atggacagtc accggaaaga ttggaatcct tctgcaccaa
      841 gagacttcat tgatgctttc cttacagaaa tggcaaagta ctcagacaag acaactacaa
      901 gttttaatga agaaaatctc atctgcacca ctctggacct cttctttgct ggaacagaga
      961 caacatccac agcactgcgt tgggctctgc tctacataac tgttaatcca gaagtgcaag
     1021 aaaaagtaca ctctgagatt gacagagtga ttggccaagg gagacaccca accatagatg
     1081 accgagactc catgccctac accaatgctg tcatccatga ggtactgagg atgggtaaca
     1141 tcatcccttt gaatgttccc agggaagtag aagctgatat cacactggcc ggattccacc
     1201 tgcctaaggg caccatggtt ttgaccaatc tgactgctct tcatagggac cccaaagagt
     1261 gggccactcc agatgtcttt aatccagagc actttttgga gaatggtcag tttaagaaga
     1321 gagaatcttt tctaccattc tcagtgggaa agagaggttg ccctggagaa caactagcaa
     1381 gatctgaact gttcacgttc ttcactgctc ttatgcaaaa atttaccttc aagcccccaa
     1441 tcaatgagaa gctgagcctg aatttcaaaa tgggcgtcgc tctttcccca gtcagctatt
     1501 gcatctgtgc tgtacctaga taatgatgct ggaaaagaaa aaaagaatga gaattcatgg
     1561 tatatgccct gaagcttcaa ggccttgctc gtatgagagg agaaagatgt tacagaatga
     1621 aggtggttca agaaatattg aagaaattgg gctaagaaat taaatcaaat ttttggattc
     1681 ttaggccctt aatttggcaa tgagcaaatc ttttctgagc tcagtggcat atcttttcat
     1741 ctaaaagttt caaggacaaa ggtgcttttc tcttttaatg taaatgcatt aaaatgaatt
     1801 aaaaagaaat taaagtttaa aattcaattt taattattaa tgaaatttaa atatgcttgg
     1861 tatatcatga gtcacatctg aagaactgtg cagtcactgt taattcttac tttgatacac
     1921 ttttatttgc ttctagtcca ttgatatgtt agcctaaagt agtgcaaaga gagaatataa
     1981 gaatcagaac agagtttctt attgtaccca cagaaaaaga ccatgaaacc tctcccatat
     2041 gacagaactc tcattaactt atgtagttct actttcaagt agtcctggaa accaacagag
     2101 caggaatgtt tctctactca cagataggca aagtaagtgg aataaaatca atttcctttt
     2161 ttattttaa
//
