LOCUS       NM_145548               4374 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus cytochrome P450, family 2, subfamily j, polypeptide 13
            (Cyp2j13), transcript variant 1, mRNA.
ACCESSION   NM_145548
VERSION     NM_145548.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4374)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL772395.12 and AL772212.6.
            
            On May 1, 2007 this sequence version replaced NM_145548.3.
            
            Transcript Variant: This variant represents the longest transcript
            and encodes the longest isoform.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK143903.1, AK165473.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-282               AL772395.12        3664-3945           c
            283-445             AL772212.6         119477-119639       c
            446-595             AL772212.6         116662-116811       c
            596-759             AL772212.6         116116-116279       c
            760-936             AL772212.6         109831-110007       c
            937-1078            AL772212.6         106916-107057       c
            1079-1266           AL772212.6         104705-104892       c
            1267-1405           AL772212.6         104490-104628       c
            1406-4374           AL772212.6         90592-93560         c
FEATURES             Location/Qualifiers
     source          1..4374
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 44.22 cM"
     gene            1..4374
                     /gene="Cyp2j13"
                     /note="cytochrome P450, family 2, subfamily j, polypeptide
                     13"
                     /db_xref="GeneID:230459"
                     /db_xref="MGI:MGI:2385197"
     exon            1..282
                     /gene="Cyp2j13"
                     /inference="alignment:Splign:2.1.0"
     CDS             73..1584
                     /gene="Cyp2j13"
                     /note="isoform 1 is encoded by transcript variant 1;
                     cytochrome P450, 2j13"
                     /codon_start=1
                     /product="cytochrome P450, family 2, subfamily j,
                     polypeptide 13 isoform 1"
                     /protein_id="NP_663523.2"
                     /db_xref="CCDS:CCDS18368.1"
                     /db_xref="GeneID:230459"
                     /db_xref="MGI:MGI:2385197"
                     /translation="MLEAADSLAAAFWAALHLRTLLLAAVTFLFLADYLKSRRPKNYP
                     PRPPRLPFVGNSFQMDLTQSHLAVQKFVKKYGNVISLDFGIKSAVIISSLPLIKEAFS
                     HLDENFINRRIFPLQRQIFNGNGLIFSSGQTWKEQRRFALMTLRNFGLGKKSLEHRIQ
                     EEASHLVEAIGEEEGQPFDPHFKIYSAVSNIICSITFGERFEYHDSQFQELLQLLDKA
                     MYLGTTSLMVHLYNIFPWITKHLPGQHQTLLATWRKLKSYIADIIDNHRKDWNPDEPR
                     DFIDAFLNEMAKYPGKTTTSFNEENLICSTLDLFLAGTETTSSTLRWALLYMALYPEV
                     QENVQAEIDRVIGQSKHPSLADRDSMPYTNAVVHEILRMGNSVPLNIPREVAVDTTLA
                     GFHLPKRSVVMTNLTALHMDPKEWATPDIFNPEHFLENGQFKKRESFLPFSMGKRACL
                     GEQLARSELFIFFTALVQKFTFKPPANENLSLKFRLGITISPVSYRIGAVPRQ"
     exon            283..445
                     /gene="Cyp2j13"
                     /inference="alignment:Splign:2.1.0"
     exon            446..595
                     /gene="Cyp2j13"
                     /inference="alignment:Splign:2.1.0"
     exon            596..759
                     /gene="Cyp2j13"
                     /inference="alignment:Splign:2.1.0"
     exon            760..936
                     /gene="Cyp2j13"
                     /inference="alignment:Splign:2.1.0"
     exon            937..1078
                     /gene="Cyp2j13"
                     /inference="alignment:Splign:2.1.0"
     exon            1079..1266
                     /gene="Cyp2j13"
                     /inference="alignment:Splign:2.1.0"
     exon            1267..1405
                     /gene="Cyp2j13"
                     /inference="alignment:Splign:2.1.0"
     exon            1406..4374
                     /gene="Cyp2j13"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccctgagcct cagctcaaac gctaattccc ctggaaagtc tgctcaagtg ctcaagcgct
       61 caagtgccag ccatgctcga agccgcggac tccctggcag ctgccttctg ggcagctctc
      121 catctccgga ctctgctgct agctgctgtc accttccttt ttctggctga ctacctcaaa
      181 agccggcgcc ccaagaacta cccgccaagg ccgccgcgct tgccctttgt gggcaactcg
      241 ttccagatgg acttgacgca gtcgcatctg gcagttcaga agtttgtgaa gaagtatggg
      301 aatgttatca gtcttgattt cggaatcaag tctgcagtca ttataagcag cctgccttta
      361 atcaaagaag ccttttctca cctggatgaa aactttataa atcgccgtat atttcctcta
      421 caaagacaga tctttaatgg aaatggattg atcttctcca gtggccagac atggaaggaa
      481 caaaggaggt ttgccctgat gacactgagg aactttggac tgggaaagaa gagcttagag
      541 catcgaattc aggaggaggc ctcccacctg gtggaggcta taggggaaga ggaaggacag
      601 ccttttgatc ctcacttcaa gatctacagt gcagtttcca atatcatttg ctccatcacc
      661 tttggggaac ggtttgagta ccatgacagt cagtttcagg agctgctgca gttactggat
      721 aaagccatgt acttgggtac cacctcccta atggtccatc tctacaacat cttcccatgg
      781 ataacaaaac atctcccagg acaacaccaa acattgttgg ctacctggag aaaactgaaa
      841 tcatatattg ctgatataat tgacaatcac cgcaaagact ggaaccctga tgagccaaga
      901 gacttcattg atgcttttct caatgaaatg gcaaagtacc caggcaagac tactacaagt
      961 ttcaatgaag aaaaccttat ctgcagcact ctggacctct tccttgctgg aacagagaca
     1021 acatcctcaa cactacgatg ggctctgctc tacatggccc tatacccaga agtccaagaa
     1081 aatgtacagg ctgaaattga ccgagtgatt ggccagtcga agcatcccag cctggctgac
     1141 agagactcca tgccctacac caatgctgtt gtccatgaaa ttctgagaat gggcaatagt
     1201 gtccctctga atattcccag ggaagtggca gttgacacta cactggctgg atttcacttg
     1261 ccaaagcggt ctgtggtcat gaccaatttg actgcactgc atatggaccc taaagaatgg
     1321 gccaccccag acatcttcaa tccagagcac tttttggaga atggacagtt taagaagaga
     1381 gaatcttttc tgccattttc aatgggaaag cgagcttgcc tcggagaaca attggccagg
     1441 tctgagctct ttattttctt cactgccctt gtgcaaaaat ttaccttcaa gccaccagcc
     1501 aatgagaacc tgagtctgaa gttcagatta ggcatcacca tttccccagt cagctaccgc
     1561 atcggtgctg tccctagaca atgatgctgg agaagaaaag gagagcagaa agaagtgaag
     1621 aatgcactga gtcactgagc cactgcccat atatggaggg caagaaggaa ggtgacgggg
     1681 aaagttggaa ggaattagac taaggtcagt ggacctatat tctggactgc tgagacctcc
     1741 aaattggttg tggataaatc acttacatgc tcaatgataa atcttttcat ctacaactgc
     1801 aaagagaact gtggttcctc cttgtaaaaa gtgcttgtaa gcaggaaatg atggtatacc
     1861 aaccgcatag aaatcactgt tatatcatag aattatacct tcagtgtgct tcctgcctac
     1921 ttcataaacg tgcacttgct tctagatatt aagttggttc atttgagact gatacagaga
     1981 tctttcctct atctcacagc ccatggaagc ctgctgagca cagaacctac ccccagtgac
     2041 acatttcctt caataagccc atagttactt caacaaagtc tgataatcaa ctctgtctgg
     2101 aaggttgtga tatgcagtca ttttcctggc cataagtgga gtctgcaaaa caaaagagag
     2161 catatggcac tttttaaaat taaaggggtt cgtgcccaag atgagaccaa aatttacttg
     2221 tgcaaaaagc atgcttctgt atgcttttca caaagtgaaa aaaaaattct tggtatgatt
     2281 ttaatagact tatgtgcccc ctatatacaa gtttactcca ataactttat aggatggatt
     2341 tctttctaaa atccagaata agtcacttat cagttattga ttcatgagtg gtgacagaaa
     2401 gcttagttca tagttccatc tgatggaatg aataaaattc agaactgaga aatcttccta
     2461 tcttcagact ccataagaac acaaaacaag gtttttctag cctcagtctg tctgccatat
     2521 ggcattactt gaaacatcta tgtctattcg tcccaactag acagggcaca atagaccaca
     2581 caaaatccag cttggtgagc caggaatttt attggggcta tgagaagaac ataggtgatt
     2641 ccaaagacac tggagccaaa aagttccctg cttaatttac aggcagcatc tgtacaactg
     2701 aagagtctct tccccattcc caatcccagc aactgttcac tcttcgtgta acctgagaag
     2761 ctggtgaact gccacgaacc aggcccagtc ggcccccctc aatccgtggg agtcaggggt
     2821 tctgacagat gggcgtagag ttggcgggaa ttggggtaac aaacagactg gacccaagga
     2881 agtgtgctgg atctgaatgt actttgtcaa atcaagcatc aaacttttta tacagaagaa
     2941 aatagggaag ttaggtgaca cgtcagcaag gtacaatgag gttacctgaa gcttacataa
     3001 aacagaggaa tccaaacaca gaaggactgg caggaaccaa ctgggataaa attcagtgtt
     3061 aacaactggg aatcaaaagc agctccacct aaggtccact taatcttaga agtcaggggc
     3121 aagggctgca tgcccttgcc atagttccca ttctagtcta ttgtatagtc cacctccccc
     3181 ttaggccata gtaaatactt gtgtatggcc tatctggagt tctaagtttc tactttggtt
     3241 cctccttata tcacaaactt ccttcttcct aggtaatggt aaattcctgt gtagggcagt
     3301 gacttagtta tccatgccta gggtcagatc aaggactgcc taagaatcta acttagctat
     3361 atgtcaaaaa atcaatcctt aggaacactt ataacaaagc aatattaagg gaaagaacac
     3421 agatccgttt actaactaaa gcaaggacat tgaagcattc gttgtacagg atgccacact
     3481 tccaggagac tacgtttccg tgaacttttt gcctcggaac agcgcccagg ttttggggct
     3541 gtcgcgcttg tcactactgg agtggatgta gcagtgagcc ttctcacttc cttgaggcaa
     3601 cgttaatctc tctcccatag taatcattgc tatgatgaaa caccatgacc ctttggagta
     3661 agaacctttg gctgcttagt cacgagatgc tgaaaacatt ttaggaagga ttaggaagta
     3721 tgactttgtt aaattaacta tggccttatt ggagaaaatg tgtcactggg ggtgggtttt
     3781 tcaacctcaa agccatgtct agtgttttta tctttctctg cctgtggatc aggaggctaa
     3841 actctcagac actcctctag taccatgtgt tctggcttgc taccaaactt cccaccatga
     3901 tgataataaa ctaactctca gaaactgtaa gaaaagcccc aattaaatgc tttcctttct
     3961 aagagatatc ttggtcttag tatctcttca ttgcaagaaa actctaagac aagtaggaaa
     4021 accactaaga ctgtgttcca agtcaaagtc tattgaagga agccaaggca ggaactgaaa
     4081 gtagacagga actcatagcc aagagctgat acaaaggcta tggagcattg tgatttacta
     4141 gcttgctcct tatgacttgc tcagccatct tcctcatgaa accaggacta ccagcacagg
     4201 gctaacacta gccataatag gatggccctc cctcatcaat tactaattag aaagagcatt
     4261 atcttgccta cagactgatc ttaggaaggc attttctcaa ttgtgattcc ctcctctcag
     4321 atgattttgg cttgtgtcat tgatataaaa gccaacacaa taaataacaa acac
//
