LOCUS       XM_006503950            1614 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus cell wall biogenesis 43 C-terminal homolog
            (Cwh43), transcript variant X3, mRNA.
ACCESSION   XM_006503950
VERSION     XM_006503950.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006503950.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..1614
                     /gene="Cwh43"
                     /gene_synonym="C130090K23Rik; imds-60"
                     /note="cell wall biogenesis 43 C-terminal homolog; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 4 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     8 samples with support for all annotated introns"
                     /db_xref="GeneID:231293"
                     /db_xref="MGI:MGI:2444131"
     CDS             310..1503
                     /gene="Cwh43"
                     /gene_synonym="C130090K23Rik; imds-60"
                     /codon_start=1
                     /product="PGAP2-interacting protein isoform X3"
                     /protein_id="XP_006504013.1"
                     /db_xref="GeneID:231293"
                     /db_xref="MGI:MGI:2444131"
                     /translation="MPGLWRAIALETLLGYVSWSLYHGLSPMIYYFPLQTLELTGLEF
                     FCVAFLSPILLTIPPLWKLVNKKWTLSLLRIVTVGSIASFEAPNAKLRLMVLALGVSS
                     SLIVQTVTWWSGSGLQRYLKIWGFILGHVLLLVLRIWYTSLNPIWSYQMSNRVILTLS
                     AVAVLDRIGTDGDYRNPEGKKPREVATGRTSLSSWLLPGAAFGSLLFLTHWIFGEVSI
                     VSRWAVSGHPHPGPDPNPFGGAVLLGFSSGLMLSGSSWLHDAGLAWWMTGAASAMGLL
                     YLRTWAAAVSGCVLAVFTGSMWPQVLGHLVNSGKNSGEAMATGMILYVLQTFFCAWCT
                     AFKFVPGGVYARERSDVLLGGSTLSGSALSRVLLFSYSSLLRVLTGVSKSCAVLAFVA
                     LELCE"
ORIGIN      
        1 tcttagcggg tagagggtgg gatgggagcc tgcagacttc attcgggctg ggtggcaggt
       61 ttggagaacg caggctgcac tagggtggca tgtccccagc agcgctgaag gcatgggtgg
      121 cgtcgggcgg ggcggcgcgc aggtgtgcca gggaggaggt gccgcaccct gccaggactc
      181 ctgctgccgc ctcagacccg cgagctactc ggggacaccg agcaggcaga ccgggcggac
      241 cccgcaggaa gcgcggggcg cacgcggggc gagggaacgg tcctctcggc tttccgggtg
      301 gtcgcagtca tgccaggcct gtggagagca attgccctgg agaccttgct gggctacgtc
      361 tcctggtctc tctaccacgg actgagcccc atgatctatt attttcccct gcaaacgctg
      421 gagctcacag ggctggaatt cttttgtgta gcctttctct ctccgatact cttaacaatt
      481 cccccactct ggaaactcgt caataagaag tggacactct ctctgctgag gatcgtcact
      541 gtaggcagca tagcttcctt tgaggctcca aatgctaagc ttcgactgat ggtcctcgcc
      601 cttggtgtgt cttcttccct gatagtgcaa actgtgacct ggtggtcagg aagtggattg
      661 caaaggtacc tcaaaatctg gggattcatt ctgggacacg tccttcttct tgtcctccga
      721 atatggtaca catcattaaa cccaatttgg agctatcaga tgtccaacag agtaattctg
      781 acattgagtg ccgtagctgt gcttgaccga attggcacag atggtgacta cagaaaccct
      841 gaggggaaga agccccgtga ggttgccacg ggcaggacct ctctatctag ttggctgttg
      901 ccaggcgccg cctttgggag cctcctgttc ctaactcact ggatcttcgg agaggtctcc
      961 attgtttcca gatgggcagt cagtggtcat ccccacccag ggccagatcc taatcctttt
     1021 ggaggtgcgg ttctactggg cttctcaagt ggactgatgc tatcgggttc atcatggctt
     1081 catgatgctg ggttagcctg gtggatgaca ggagcagctt cggccatggg tctcctctac
     1141 ctgcgcacat gggcagctgc tgtttctgga tgtgtcctgg cagtctttac ggggtctatg
     1201 tggcctcaag tacttggcca tcttgtgaac tcagggaaaa actccggaga agccatggcc
     1261 actggcatga tcctttatgt tttacaaaca tttttctgtg cctggtgcac agcgtttaag
     1321 tttgttcccg gaggtgtcta cgctagagaa agatctgatg tgcttttggg tgggtctact
     1381 ctgtcgggct ctgctctctc ccgagtcctg cttttttctt attccagctt gctcagggtg
     1441 ctgacaggag taagtaagag ctgtgctgtg cttgcctttg ttgcgttgga gctctgtgaa
     1501 tgatgagcta ggctagctca ttctcactac gcctagaatt ggggaattgg gctttatttc
     1561 agtttcgtgc aaatgaggac cttctttagt ggaagaggca tggttacagg gcag
//
