LOCUS       NM_001113562            1308 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus cutC copper transporter (Cutc), transcript variant 1,
            mRNA.
ACCESSION   NM_001113562
VERSION     NM_001113562.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1308)
  AUTHORS   Nishimura,M., Yokoi,N., Miki,T., Horikawa,Y., Yoshioka,H.,
            Takeda,J., Ohara,O. and Seino,S.
  TITLE     Construction of a multi-functional cDNA library specific for mouse
            pancreatic islets and its application to microarray
  JOURNAL   DNA Res 11 (5), 315-323 (2004)
   PUBMED   15747579
REFERENCE   2  (bases 1 to 1308)
  AUTHORS   Carninci,P., Waki,K., Shiraki,T., Konno,H., Shibata,K., Itoh,M.,
            Aizawa,K., Arakawa,T., Ishii,Y., Sasaki,D., Bono,H., Kondo,S.,
            Sugahara,Y., Saito,R., Osato,N., Fukuda,S., Sato,K., Watahiki,A.,
            Hirozane-Kishikawa,T., Nakamura,M., Shibata,Y., Yasunishi,A.,
            Kikuchi,N., Yoshiki,A., Kusakabe,M., Gustincich,S., Beisel,K.,
            Pavan,W., Aidinis,V., Nakagawara,A., Held,W.A., Iwata,H., Kono,T.,
            Nakauchi,H., Lyons,P., Wells,C., Hume,D.A., Fagiolini,M.,
            Hensch,T.K., Brinkmeier,M., Camper,S., Hirota,J., Mombaerts,P.,
            Muramatsu,M., Okazaki,Y., Kawai,J. and Hayashizaki,Y.
  TITLE     Targeting a complex transcriptome: the construction of the mouse
            full-length cDNA encyclopedia
  JOURNAL   Genome Res 13 (6B), 1273-1289 (2003)
   PUBMED   12819125
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY794464.1 and AK007591.1.
            
            Sequence Note: This variant (1) encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK007591.1, BY707635.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-75                BY794464.1         2-76
            76-1308             AK007591.1         1-1233
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 36.67 cM"
     gene            1..1308
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /note="cutC copper transporter"
                     /db_xref="GeneID:66388"
                     /db_xref="MGI:MGI:1913638"
     exon            1..198
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /inference="alignment:Splign:2.1.0"
     CDS             141..959
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /note="isoform 1 is encoded by transcript variant 1;
                     copper homeostasis protein cutC homolog; cutC copper
                     transporter homolog"
                     /codon_start=1
                     /product="copper homeostasis protein cutC homolog isoform
                     1"
                     /protein_id="NP_001107034.1"
                     /db_xref="CCDS:CCDS50443.1"
                     /db_xref="GeneID:66388"
                     /db_xref="MGI:MGI:1913638"
                     /translation="MKKGASCERKQAWISSGKAGAGNGFLMEVCVDSVESAVNAERGG
                     AGRIELCSGLLEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREVEVMKADI
                     RLAKLYGADGLVFGALTEDGHIDKELCLSLVALCRPLPVTFHRAFDMVHDPMAALETL
                     LTLGFERVLTSGCDSSALEGLPLIKQLIDQAKGRIVVMPGGGITDKNLQRILEGSGAT
                     EFHCSARSSRDSGMKFRNSSVAMGASLAHSEYSLKVTDVTKVRTLNAIAKDVLV"
     exon            199..270
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /inference="alignment:Splign:2.1.0"
     exon            271..330
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /inference="alignment:Splign:2.1.0"
     exon            331..540
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /inference="alignment:Splign:2.1.0"
     exon            541..576
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /inference="alignment:Splign:2.1.0"
     exon            577..710
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /inference="alignment:Splign:2.1.0"
     exon            711..738
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /inference="alignment:Splign:2.1.0"
     exon            739..844
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /inference="alignment:Splign:2.1.0"
     exon            845..1308
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1285..1290
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /note="hexamer: AATAAA"
     polyA_site      1303
                     /gene="Cutc"
                     /gene_synonym="2310039I18Rik; CGI-32"
                     /note="major polyA site"
ORIGIN      
        1 aggttggcca ctgcgcgtgc acgcacgact ccctgggagg ctgccgggca cgggcgtcgg
       61 ggacgcgcct cctccgtcgc tcgcgcggcc gcggggactc agtggaaacc gaaggcgagc
      121 gagggaggaa cgcgggaagc atgaagaaag gggcttcttg cgagcggaaa caggcgtgga
      181 tatcgtcggg gaaggcggga gcaggaaatg gatttcttat ggaagtgtgt gtagattcgg
      241 tggagtccgc tgtgaatgca gaaagaggag gtgctggtcg gattgaactg tgctctggtc
      301 tactggaggg aggaaccaca cccagtatgg gtgttcttca agtagtaaaa cagagtgttc
      361 agatcccagt gtttgtgatg atccgcccac gcggaggcga cttcttatac tccgaccgtg
      421 aagttgaggt gatgaaggct gacattcgcc ttgccaagct ttatggtgcc gatggtttgg
      481 tgtttggggc attgactgaa gatggacaca ttgacaaaga gctatgcttg tctcttgtag
      541 ctctttgccg ccctctgccg gtcactttcc acagagcctt tgatatggtt catgatccaa
      601 tggcagctct ggagaccctc ctaaccttag gatttgaacg cgtcctgacc agtggatgcg
      661 acagctcagc actggaagga ctgcctctaa taaagcaact catagaccag gcaaaaggca
      721 ggattgtggt aatgccagga ggtggaataa cagataaaaa tctgcaaagg atccttgagg
      781 gttccggtgc tacagaattc cactgctctg cccgatcttc cagagactca ggaatgaagt
      841 ttcgaaattc ctctgtcgca atgggagctt cgcttgctca ttcagaatat tctctaaagg
      901 taacagatgt gacaaaagta aggactttga atgcaattgc aaaggacgtc ctagtttagt
      961 taaacttgtc ggagagacat gggcatcaac agtgtgaagg gagaagttgg actgacaata
     1021 cctgacgaag ctctaacctt tcacatggcc atagatgttt gtaagaagaa aaagacattg
     1081 gaacagcaat gcaattactt tctttagtag tcattggtgt ctgtcatcat ggataaattt
     1141 agtctgtact tcttacaaga agagaggcgt agtcattctc agtgggctta actgatgaac
     1201 tggcaaagtt cagctgcaaa gtatgaaatc agagtttgtt tcagggtcaa tttagtgcca
     1261 cttttttgcc ttttggtttt gtaaaataaa aattctcatt ctattgtg
//
