LOCUS       NM_030021               2352 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus cutA divalent cation tolerance homolog-like (Cutal),
            transcript variant 1, mRNA.
ACCESSION   NM_030021 XM_130196
VERSION     NM_030021.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK033810.1 and AK085616.1.
            
            On Apr 21, 2015 this sequence version replaced NM_030021.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK085616.1, AK021330.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-40                AK033810.1         1-40
            41-2352             AK085616.1         2-2313
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 23.01 cM"
     gene            1..2352
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
                     /note="cutA divalent cation tolerance homolog-like"
                     /db_xref="GeneID:77996"
                     /db_xref="MGI:MGI:1925246"
     exon            1..196
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            197..342
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            343..402
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            403..448
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            449..498
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            499..2352
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2259..2264
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
                     /note="hexamer: AATAAA"
     regulatory      2263..2268
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
                     /note="hexamer: AACAAA"
     polyA_site      2280
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
                     /note="major polyA site"
     polyA_site      2287
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
     polyA_site      2351
                     /gene="Cutal"
                     /gene_synonym="D730039F16Rik"
ORIGIN      
        1 gaaaaaggtg tgtgcagggg aaggaggctg cagcttaggc ttcagtgccc gcctccccgg
       61 cccgcaccct acctgaggct gtagttcacg gttactgcct agggctaaat ccccaatccc
      121 caacaccacc atggacagac cggaatcacg gtgccctcca ccgggctccc tcaggctcgt
      181 ccttacatgc ctcctgatcc tgacagctgt tctgatgtat cccgtgctca ggacctttag
      241 cctctggctc cactcttccc tcactgggat ctatgtctct ggctcttatt ccatcgtttt
      301 tgtcaactgt cccaatgagc aaattgccag agacatcgcc agggccatcc tggataagaa
      361 gatggcttcg tctgtgaaca tcttgccgaa gacctcttct ctgtactttt ggaaaggaga
      421 aatagaagaa ggcattgagg tctcactgct aataaagaca aagacttcca aggtctcccg
      481 gctgtttgcc tatatgaggt tggcgcatcc ttttgaaatc ccagaggtct tcagtattcc
      541 catggaccaa ggagatgctc gctttttacg atggcttgag gagggaatga aggagaacta
      601 aggagagaga accttattgt gcaggcttct gcctctagcc tttgttgact gtgttctggg
      661 aaaaagcagg cctccttctg cctcccattg aatgttccta acagcagaca ggttctagct
      721 gacctgtgca tgctgaatga agggctgaga atgtcaaggc tggaagtgaa agccaatcag
      781 gcctccaaga accaagtgga accggtttcg tgtgtttgca ggtggcctga gggtacgtgg
      841 gtaaggatga gagactgagg ggaggcagca gtgacggtga ggtttctcgt cttcaggctc
      901 tgggctgacc ataaagtacc tagggtatga ttgttcctct gtttcttgtg gggataggtg
      961 accttgatca tctaggggtg tgtgggagag ctactttcta aaacaattga tatgggctct
     1021 attcaaaaca atgaacagtc ctggtacgat tagaggtcaa cagaattgat tcttgctttt
     1081 gaatcttaca gaggtgaagc tagaaaaggg gtgcccgagc ctaaacagac tagggggata
     1141 ttagggcttc aacacagact catgggttgg gactaaatct tgattttttt tttttactgg
     1201 atttaatata ctagacacaa atatcctgga gatgtaggtt ctgagccctg ggaacctgct
     1261 ggccagtgtg gtttgtttgt ttgtttgttt gtttgtttgt ttgttttgga tttgctagac
     1321 agagcttctg aggttgacag aggaacccct gaacttctca aggaatgtga ccatcatcca
     1381 cgctccaagt gaaactgtca gaagtttgta aatcactgtt gtgattctct ccattttatg
     1441 cattatcaca aagcagtgca tttcatggaa tttcagaagg gggccatatt gaatcacaga
     1501 ctatccaagg tttttcatac catgctgagg tgtaagctac accagtatct tctacgctgg
     1561 tcccaggcat ctctgaagag aagagggaag gatgggggat gctgagccca aagctgtgaa
     1621 aatgcagagg tgaaacaaac cccattcctg aatctcacaa gctaactcca gtgggcagcc
     1681 cacgggtggt tagagttggg atacagacgg ctatagtgtc ctggtctctt caatggcagt
     1741 gggaggggtg ggttcacata agacaaatag aaccacattc tagttctaat tgctgtgtgt
     1801 ctcccacctt gatgtcccca aataccagat ggtccaaggg catacctctg aaaacctgat
     1861 cagcactgta gcttgaggcc cttccaaagg actagagaat tccactggtg gctgaggagt
     1921 ggagatttct ggtcttaaaa taccagtttc tgaagtatac acaagtcttg aaaaccctac
     1981 ttaaaatgac cccagatgga ccatgttgct ttttggagaa agtccagttt ataggtcttc
     2041 ctttcagaac gctgtccttt ccattcccac ctcaagtgtc ccctgtgtgg cagatgggtg
     2101 accctaccct gcactgtccc tgtgctcatg aagtcccctc tacctttgaa aagcctctct
     2161 cctgggtcgg aggtcagagg cctgtctgaa tcttgttgat ctcttgccca aggcttaaga
     2221 attacttccc aagttgacat ttcagtttca aggatttaaa taaacaaagc tttctctaca
     2281 ccatgaattt acttttaagt tgtaataggc ataatgtcta ttttttttaa aaaaaatcta
     2341 agagactatt at
//
