LOCUS       NM_001384190             725 bp    mRNA    linear   ROD 05-OCT-2024
DEFINITION  Mus musculus cortexin domain containing 2 (Ctxnd2), mRNA.
ACCESSION   NM_001384190
VERSION     NM_001384190.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oyama,Y., Miyata,H., Shimada,K., Fujihara,Y., Tokuhiro,K.,
            Garcia,T.X., Matzuk,M.M. and Ikawa,M.
  TITLE     CRISPR/Cas9-mediated genome editing reveals 12 testis-enriched
            genes dispensable for male fertility in mice
  JOURNAL   Asian J Androl 24 (3), 266-272 (2022)
   PUBMED   34290169
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC092202.28.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049745.1, AK016169.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-127               AC092202.28        47925-48051
            128-725             AC092202.28        63702-64299
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 40.74 cM"
     gene            1..725
                     /gene="Ctxnd2"
                     /gene_synonym="4930558C23Rik"
                     /note="cortexin domain containing 2"
                     /db_xref="GeneID:67654"
                     /db_xref="MGI:MGI:1914904"
     exon            1..127
                     /gene="Ctxnd2"
                     /gene_synonym="4930558C23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            128..725
                     /gene="Ctxnd2"
                     /gene_synonym="4930558C23Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             188..367
                     /gene="Ctxnd2"
                     /gene_synonym="4930558C23Rik"
                     /codon_start=1
                     /product="cortexin domain containing 2"
                     /protein_id="NP_001371119.1"
                     /db_xref="GeneID:67654"
                     /db_xref="MGI:MGI:1914904"
                     /translation="MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVK
                     NPYEVSSTTADLPLN"
     polyA_site      558
                     /gene="Ctxnd2"
                     /gene_synonym="4930558C23Rik"
     regulatory      701..706
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ctxnd2"
                     /gene_synonym="4930558C23Rik"
                     /note="hexamer: ACTAAA"
     polyA_site      725
                     /gene="Ctxnd2"
                     /gene_synonym="4930558C23Rik"
                     /note="major polyA site"
ORIGIN      
        1 agttctttcg gtctcaccca ctgtcattgc agttaacctc cctgaggtgg tttcaactgc
       61 aaatatcttg ctcttggtaa ctcctaaatt ccagtcctac aatatggtgt acctcccgag
      121 catttgcaaa tatgacaaat ctgaagctat ccccgtggag gtagctgtgt ctggaagaca
      181 gtaagagatg tgtgtcctca tggaagattc cagcatgtcc aatggcatcg atgtggacaa
      241 aggctttgcc attgccttcg ttgtccttgt gtttgtgttc ctaatagtga tggtttttcg
      301 gtgtgtaaag ttggtgaaga atccctatga ggtcagctct acaaccgcag acctgcctct
      361 gaattgaagt accatcaaac ctagaggtct cctcttgaca agagacttgc aatcattttt
      421 tagtggagca gtgcttttag cagggtctta tacagccaag acttgcctca aaaccctgaa
      481 ccctgtttct cctccccctc ctaaataccg ggactacaaa gaatgctcca tcacaacatt
      541 taaaatcttt tatattgatg tgtatgatcc agactttata tccccttacc tctgcatttc
      601 tcaagcttgc aatcttatgt tctgtaacaa gcatgtagga gtatctcacc agagagaaaa
      661 gtggggctat ttttcgttgt tctttttcag ggaatccatt actaaagttg aacttattga
      721 ctaga
//
