LOCUS       NM_027344               1332 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus cathepsin L-like 3 (Ctsll3), mRNA.
ACCESSION   NM_027344
VERSION     NM_027344.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1332)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK145382.1.
            
            On Apr 6, 2007 this sequence version replaced NM_027344.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK145382.1, BC147423.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN01164133
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1332              AK145382.1         5-1336
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 32.53 cM"
     gene            1..1332
                     /gene="Ctsll3"
                     /gene_synonym="2310051M13Rik"
                     /note="cathepsin L-like 3"
                     /db_xref="GeneID:70202"
                     /db_xref="MGI:MGI:1917452"
     exon            1..76
                     /gene="Ctsll3"
                     /gene_synonym="2310051M13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            77..212
                     /gene="Ctsll3"
                     /gene_synonym="2310051M13Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             87..1082
                     /gene="Ctsll3"
                     /gene_synonym="2310051M13Rik"
                     /EC_number="3.4.22.15"
                     /codon_start=1
                     /product="cathepsin L-like 3 precursor"
                     /protein_id="NP_081620.2"
                     /db_xref="CCDS:CCDS36691.1"
                     /db_xref="GeneID:70202"
                     /db_xref="MGI:MGI:1917452"
                     /translation="MTPVFLLATLCLGVVSAAPAHNPSLDAVWEEWKTKHKKTYNMND
                     EGQKRAVWENNKKMIDLHNEDYLKGKHGFSLEMNAFGDLTNTEFRELMTGFQGQKTKM
                     MMKVFQEPLLGDVPKSVDWRDHGYVTPVKDQGSCGSCWAFSAVGSLEGQMFRKTGKLV
                     PLSVQNLVDCSWSQGNQGCDGGLPDLAFQYVKDNGGLDTSVSYPYEALNGTCRYNPKN
                     SAATVTGFVNVQSSEDALMKAVATVGPISVGIDTKHKSFQFYKEGMYYEPDCSSTVLD
                     HAVLVVGYGEESDGRKYWLVKNSWGRDWGMNGYIKMAKDRNNNCGIASDASYPVV"
     exon            213..335
                     /gene="Ctsll3"
                     /gene_synonym="2310051M13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            336..485
                     /gene="Ctsll3"
                     /gene_synonym="2310051M13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            486..710
                     /gene="Ctsll3"
                     /gene_synonym="2310051M13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            711..873
                     /gene="Ctsll3"
                     /gene_synonym="2310051M13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            874..982
                     /gene="Ctsll3"
                     /gene_synonym="2310051M13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            983..1332
                     /gene="Ctsll3"
                     /gene_synonym="2310051M13Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcacagcct gggacctcag caagccctga agacctgaga ctctgaagcc cacctgccca
       61 gctgtggaca gcccaggttt ggaagtatga ctccagtttt cctcctggcc accctgtgct
      121 taggggtggt ctcagctgct ccagcacaca atcccagttt ggatgctgta tgggaggaat
      181 ggaagacaaa acacaagaaa acatacaaca tgaatgatga aggacagaag agagcagtgt
      241 gggagaacaa caagaagatg atcgacctgc acaatgagga ctatctgaag gggaagcacg
      301 gcttcagctt ggagatgaac gcctttggtg atttgaccaa tacagaattc agggaattga
      361 tgactggctt tcaaggccaa aagaccaaga tgatgatgaa ggtcttccag gagcccttgc
      421 tgggtgatgt ccccaagtct gtggattgga gagatcatgg ctatgtaact cctgtgaaag
      481 accagggttc ttgtggctct tgttgggctt ttagtgcagt tggttcacta gagggacaga
      541 tgttccggaa aacaggtaaa ctggtccctc tgagtgtaca gaacctagtg gactgctcct
      601 ggtcacaagg caaccaaggc tgcgatggtg gcttgccaga tcttgccttc cagtacgtaa
      661 aggataatgg aggcttggac accagtgtgt cctacccata tgaagcactg aatggaacat
      721 gcaggtacaa tcctaaaaac tctgctgcta cagtcacggg ctttgtgaac gtccaatcca
      781 gtgaagatgc cctgatgaag gctgtggcca ctgtggggcc catctcagtt ggaattgaca
      841 ctaaacacaa gtcgttccag ttctacaagg agggcatgta ctatgagcca gactgtagca
      901 gcactgttct ggatcacgcc gtcctggtgg ttggctatgg tgaagaatca gatggcagga
      961 agtactggct ggtcaagaac agctggggtc gagactgggg catgaatggc tacataaaga
     1021 tggccaaaga ccggaacaac aactgtggga ttgcttcaga tgcttcctac cctgtcgtgt
     1081 gagctgctgg acaacaagga gtagacagag gatggcatgg accaaggaaa tctttcccct
     1141 tcgtggccca gcctcagctc tgtggacaat ggcggctgag tcactggagt tccgtgctat
     1201 ggtgtgaact ctgggacatt ttattccagt taaattcaag tggcactcta tggctgtgag
     1261 cagttttaca tccatggcgt ttgaatttta attttttaga agatggatac aatttctata
     1321 aaacctacat tg
//
