LOCUS       XM_030242074            1387 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus cardiotrophin 1 (Ctf1), transcript variant
            X3, mRNA.
ACCESSION   XM_030242074
VERSION     XM_030242074.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1387
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..1387
                     /gene="Ctf1"
                     /gene_synonym="CT-1"
                     /note="cardiotrophin 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 8 ESTs, 18 long SRA
                     reads, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 30 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:13019"
                     /db_xref="MGI:MGI:105115"
     CDS             79..867
                     /gene="Ctf1"
                     /gene_synonym="CT-1"
                     /codon_start=1
                     /product="cardiotrophin-1 isoform X3"
                     /protein_id="XP_030097934.1"
                     /db_xref="GeneID:13019"
                     /db_xref="MGI:MGI:105115"
                     /translation="MDHQTDSSISFLPHLEAKIRQTHNLARLLTKYAEQLLEEYVSAA
                     TGRALWAAGLLTTAAAAGRPEWPGSEPCRATGVRAAAAGCSRPECAARAVGCRPPPPG
                     GAEPARPAPAAEPGGRSPPGSGPGRRGGDSAGRAGRCSPRARARARHRRHPLHGQQHC
                     RHLLSQGAGVPRVRPLWRVGEPHRGRPGPAGARGRRLRVNTFSCKLALSRLFGFKFSV
                     SPSVSCVFLGCPYLSAFVWSLSSALLSAGSFFFPTVSRFVSLQS"
ORIGIN      
        1 gtgagttggg agaaagagca ggcgcaagga attgaggctt cagggccttg ggttcagggg
       61 ttagatcacc gaatatatat ggaccaccag actgactcct caatctcatt cctaccccat
      121 ttggaggcca agatccgcca gacacacaac cttgcccgcc tcctgaccaa atatgcagaa
      181 caacttctgg aggaatacgt gagtgcagca acagggagag ccctttgggc tgccgggctt
      241 ctcaccaccg cggctgccgc tggccggcct gagtggcccg gctccgagcc atgcagggct
      301 accggtgtcc gagcggctgc ggcaggatgc agccgccctg agtgtgctgc ccgcgctgtt
      361 ggatgccgtc cgccgccgcc aggcggagct gaacccgcgc gccccgcgcc tgctgcggag
      421 cctggaggac gcagcccgcc aggttcgggc cctgggcgcc gcggtggaga cagtgctggc
      481 cgcgctgggc gctgcagccc gcgggcccgg gccagagccc gtcaccgtcg ccaccctctt
      541 cacggccaac agcactgcag gcatcttctc agccaaggtg ctggggttcc acgtgtgcgg
      601 cctctatggc gagtgggtga gccgcacaga gggcgacctg ggccagctgg tgccaggggg
      661 cgtcgcctga gagtgaatac tttttcttgt aagctcgctc tgtctcgcct ctttggcttc
      721 aaattttctg tctctccatc tgtgtcctgt gtgttcttgg gctgtcccta tctttctgca
      781 tttgtgtggt ctctctcttc tgctctcctc tctgcaggga gcttcttttt tccaacagtt
      841 tctcgttttg tctctctcca gtcttgaaca cttttgtctc cgagaggtct ctttttgttt
      901 ccttgtctct tggttctttc tttgcttgct tgcttgcttg cttgcttgtt gttgagacag
      961 ggtctcacca tatagctctg gatggcctgg aacttgctat gtaggccagg ctggcctcca
     1021 gctcatagag atccacttgc ctccgactcc caatttcccc atctgtctcc ctgtgatcca
     1081 tatgggtatg tgtaaccctt actttgtctc atggaggtga caatttttct cccttcagtt
     1141 tctttgttct ttactgacca gaaaagtgcc tacttgtccc ctggtggcaa ggccattcac
     1201 cttaggacct tcccaccagt tcctttgtag gcaaatccct ccccctttga ggtccttccc
     1261 tttcataccg ccctaggctg gtcaatggag agagaaaggc agaaaaacat ctttaaagag
     1321 ttttatttga gaataaatta atttttgtaa ataaaatgtt taacaataaa actaaacttt
     1381 tatgaaa
//
