LOCUS       NM_001033372            1040 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus cancer/testis antigen 45 (Ct45a), mRNA.
ACCESSION   NM_001033372 XM_195205 XM_904817
VERSION     NM_001033372.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AK146653.1.
            
            On Apr 5, 2007 this sequence version replaced NM_001033372.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK146653.1, CF550981.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1040              AK146653.1         2-1041
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 30.06 cM"
     gene            1..1040
                     /gene="Ct45a"
                     /gene_synonym="Gm648"
                     /note="cancer/testis antigen 45"
                     /db_xref="GeneID:270599"
                     /db_xref="MGI:MGI:2685494"
     exon            1..176
                     /gene="Ct45a"
                     /gene_synonym="Gm648"
                     /inference="alignment:Splign:2.1.0"
     exon            177..330
                     /gene="Ct45a"
                     /gene_synonym="Gm648"
                     /inference="alignment:Splign:2.1.0"
     CDS             207..848
                     /gene="Ct45a"
                     /gene_synonym="Gm648"
                     /codon_start=1
                     /product="uncharacterized protein LOC270599"
                     /protein_id="NP_001028544.1"
                     /db_xref="CCDS:CCDS53075.1"
                     /db_xref="GeneID:270599"
                     /db_xref="MGI:MGI:2685494"
                     /translation="MLKRKISPVGEGEAMGPAKKNYTLDMVSHKSLEASAEAKGEGAL
                     VSQKAQVGMVEADPKVYAQNCASKQLMPVTGEAVLPMPGDSQTEDSLHRKDGGHDTVV
                     GGSVNSDSSEGTAKAPAMSSSEAQPYVSSLRPNLSNYEIKCALMTEIRRFGRQYGRLF
                     KILQEVQGPVEVRIQFVEFSIKEAARFKRRHLIQYLEKILEKLKSERSSNNDE"
     exon            331..669
                     /gene="Ct45a"
                     /gene_synonym="Gm648"
                     /inference="alignment:Splign:2.1.0"
     exon            670..763
                     /gene="Ct45a"
                     /gene_synonym="Gm648"
                     /inference="alignment:Splign:2.1.0"
     exon            764..1040
                     /gene="Ct45a"
                     /gene_synonym="Gm648"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1001..1006
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ct45a"
                     /gene_synonym="Gm648"
                     /note="hexamer: AATAAA"
     polyA_site      1020
                     /gene="Ct45a"
                     /gene_synonym="Gm648"
                     /note="major polyA site"
ORIGIN      
        1 gacgctggag ttgcagagga ctgcaactgc gcaggacatt ttctaggccc cggagagtga
       61 aacgaaggtg tttgtgctgt ctgagcagac atcttgcaca acgagccatc tcctcagccc
      121 ccagactgca tattttctgg ggagttcact tttttcttta gagttatctt cgcaaggata
      181 agaatcctga caaagagggg cataccatgc tgaaacggaa aattagccct gttggagaag
      241 gagaagccat gggtccagct aagaaaaatt atactctgga catggtgtca cataaatctc
      301 ttgaagcttc agctgaggca aagggagaag gtgctcttgt tagccagaag gcccaggtgg
      361 ggatggtgga ggcggatccg aaagtctacg cacagaactg tgcttccaaa cagcttatgc
      421 ctgtgacagg agaagccgtt ctccccatgc caggagattc tcagactgaa gactctcttc
      481 atcgcaagga tggtggccac gacacagttg tggggggaag tgttaacagt gactcctctg
      541 aaggcactgc caaggctcca gcaatgtctt catcagaagc tcagccctat gtttcctcac
      601 tgagaccaaa tttgtccaat tatgaaataa aatgtgccct gatgacagaa atccgacgct
      661 ttggacgaca atacggaagg cttttcaaga tccttcaaga agtgcaagga cctgtggaag
      721 tcaggattca gtttgtcgag ttctccatca aggaggcggc aaggtttaaa agacgccatt
      781 taatccagta tctggagaag atactggaaa aattaaagtc tgaaaggtct tccaacaatg
      841 atgagtgacc tacactcaag agtgtgatcc tgctgttaca gtggtcagca agattcagca
      901 aatagttcag agtgattaca atgtaatagg aggatgctga gacctcctag catgtgttag
      961 ctaaaataat tacccctgag aaaactgtct taaactactc aataaatggc tggcttttaa
     1021 cctgtgtttt gtttgaaagc
//
