LOCUS       NM_001001332             387 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus cystatin domain containing 6 (Cstdc6), mRNA.
ACCESSION   NM_001001332 XM_001471462
VERSION     NM_001001332.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT033776.8.
            
            On or before May 13, 2008 this sequence version replaced
            XM_001471462.1, NM_001001332.1.
            
            Sequence Note: This RefSeq record was created from genomic sequence
            data because no single transcript from the reference strain was
            available for the full length of the gene. The extent of this
            transcript is supported by transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY169235.1, BC117064.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135, SAMN01164143
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-102               CT033776.8         114204-114305       c
            103-204             CT033776.8         102894-102995       c
            205-387             CT033776.8         101638-101820       c
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 25.47 cM"
     gene            1..387
                     /gene="Cstdc6"
                     /gene_synonym="100038854; Gm1975"
                     /note="cystatin domain containing 6"
                     /db_xref="GeneID:100038854"
                     /db_xref="MGI:MGI:3696881"
     exon            1..102
                     /gene="Cstdc6"
                     /gene_synonym="100038854; Gm1975"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..330
                     /gene="Cstdc6"
                     /gene_synonym="100038854; Gm1975"
                     /codon_start=1
                     /product="stefin A1-like protein"
                     /protein_id="NP_001001332.2"
                     /db_xref="CCDS:CCDS49840.1"
                     /db_xref="GeneID:100038854"
                     /db_xref="MGI:MGI:3696881"
                     /translation="MYGGVSEAKPATPEIQKIADKVRSQLEAKTNKKYEKFEAVEYKT
                     QAVAGENIFIKMDVGHGCFIHIKVFSGPTGKDNYELHGYQTDKAKDDELTYF"
     exon            103..204
                     /gene="Cstdc6"
                     /gene_synonym="100038854; Gm1975"
                     /inference="alignment:Splign:2.1.0"
     exon            205..387
                     /gene="Cstdc6"
                     /gene_synonym="100038854; Gm1975"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcagtgtcca agccagcaaa gaaacaagtc atcaagacta tgtacggagg tgtttcagag
       61 gccaaacctg ccacaccaga aatccagaag attgctgaca aggtcagatc tcagcttgaa
      121 gcaaaaacca ataagaaata tgaaaaattc gaagccgttg agtataaaac tcaagccgtc
      181 gctggagaaa atatcttcat taagatggat gtaggtcatg gttgtttcat tcacataaaa
      241 gtcttcagtg gacctactgg aaaagataat tatgaacttc atggttacca gactgacaaa
      301 gccaaggatg acgagttgac ctacttctaa gcagcaaatt ctaaagtgat ctgattcctc
      361 tcagtggaaa gagattcagc catgaat
//
